CsGy3G018850.1 (mRNA) Cucumber (Gy14) v2

NameCsGy3G018850.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr3 : 14975214 .. 14976968 (+)
Sequence length465
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGTATAAATTTGAAAATAAGAAGGGCACATGCTTTATTGAAGAAAGTGGATAGGTAACTTATGGATTGAATAGCACACACAGATCAATAACATGATTTTATTGTAGAAACCAAATGTACTAATTTAAAGTACAAAAGGTTACGTCCAAACATTATGATGAGAAATTTCTTCCTCTCGCTCCTTAGTAGAATTAACAGTTCAACTATCTGAGGGAGGAACCAAGGGTGAAGATTTTGTTATCTTTGATCTGAAAAGCTTCTCAAAATGAGCTGTGAGATTGAAAGAAGCTTCAAAAACTTGGGGTGAAAATGCCCCAAAAATTGATGTCTTTCCTCCCAACTCTTCTAACAGAGGGCTGTGTTACAATCAATCAAAAAATCAAACTTTGTTAATAATAATGTTAACTTATAAATGATATACATCCGTGTATTATATGTTCGTTTGTTTTGAATTTTTCTTCAAACAAAACCACAAAATATTTATAAGGAATAGAACAATTTCAAAAATAGAAAAAATTTACTGACCACAATAAAAAATAACAAAAATGTTCTACGATCAATTGACGTCTAGCAACCCTAATATATTTGAAAAATTATTATTTAAATTTAACTATTCTATTTGAAAAATGATTGTTTCAATTTAACTATTCTATTTTTGTTCTATATTTTTTAGTTTATATTTCATCGTTTAAATACCCAAATTTAAACAATTTTTTTCATAATTTTTTTTATTACACGATAGTTTAAATTTGGTTATCCAAATCTTAAGATTTTTTGGTACGATAGTTTATATTTGAAAAACGATTGTTTTTTTATACAGGTTTAGATTAGATTTGATAGTTTAAATTTGACTTTAAATTTTGAATATTGAATATTTTTGTATGATCTTTTATATATAGTACATTCCACCAAATAACTGAAAAACGGCCTAAAAAAGAAAGACCATGAAAAGTAATAACAAATATTAAATATTTTAAAAATTATTCTTAGTTAAAGGCACTTTCTTTTCTTTGAAATGCATTCAAATTGTAACGCAAATTAGGTAGAATCAATTTTCTATGAACTATGACTCCGTTTGAAAACTTCAAAACATTTTTTTTTTTAAACTGTTAAGTTAAGATTAAGAGAAAAAACATAAATCAAAACACCAAGAAAAGAATTCAAATTAAAAAAAAAAAAAAAGACAAAAGCTCAATAATGCAAAATTGAAACTTACTGTGTGGTGGTGATAATAGTGAAGCACTCCAATCCTTCTTCTCCGGCCATTTTTCCGACGGCAAAGTACTTTGGAACCAAAACCAACTGTCCCGCTTTCACTTCCGCATCAATTTGATAACGCATAAACGTCTCAGCAATCTGAACCCGACCCGACCCGCTCGCTACATATATCAGCTGCACCGAAGGGTCGGCAACATACACCGGCGATCGCACGGCATTGGCCTCAAGCTTCTCAAGAACTGCCGTCAGCCCAGATTTCCCAATAAATGGAAACTTCTCTTCCGTTAGGACAGTCACCGACCCACCACCCTTGACTACGGCATCGGGAGCGGTGTCGTATATGTTGAAAACAAGATCGCTGTGGCAGTCGGGCTCGGGTAAGGTTTGGTCATCTTTGAGCTTGAATATTAGGCCGTTGGGTTGGCTTTTGAGAAGTACCTCTCTTTCCTTTTCGGTTAGATCGTACACTTTTTCAATGTAGTCCGACGAGAAGCCTTGTAGGACTCCGAGGGGTCCAGCAAAGACAACGTAG

mRNA sequence

ATGACAGGTATAAATTTGAAAATAAGAAGGGCACATGCTTTATTGAAGAAAGTGGATAGTGAAGCACTCCAATCCTTCTTCTCCGGCCATTTTTCCGACGGCAAAGTACTTTGGAACCAAAACCAACTGTCCCGCTTTCACTTCCGCATCAATTTGATAACGCATAAACGTCTCAGCAATCTGAACCCGACCCGACCCGCTCGCTACATATATCAGCTGCACCGAAGGGTCGGCAACATACACCGGCGATCGCACGGCATTGGCCTCAAGCTTCTCAAGAACTGCCGTCAGCCCAGATTTCCCAATAAATGGAAACTTCTCTTCCTCACCGACCCACCACCCTTGACTACGGCATCGGGAGCGGTGTCGTATATGTTGAAAACAAGATCGCTGTGGCAGTCGGGCTCGGGTAAGTCCGACGAGAAGCCTTGTAGGACTCCGAGGGGTCCAGCAAAGACAACGTAG

Coding sequence (CDS)

ATGACAGGTATAAATTTGAAAATAAGAAGGGCACATGCTTTATTGAAGAAAGTGGATAGTGAAGCACTCCAATCCTTCTTCTCCGGCCATTTTTCCGACGGCAAAGTACTTTGGAACCAAAACCAACTGTCCCGCTTTCACTTCCGCATCAATTTGATAACGCATAAACGTCTCAGCAATCTGAACCCGACCCGACCCGCTCGCTACATATATCAGCTGCACCGAAGGGTCGGCAACATACACCGGCGATCGCACGGCATTGGCCTCAAGCTTCTCAAGAACTGCCGTCAGCCCAGATTTCCCAATAAATGGAAACTTCTCTTCCTCACCGACCCACCACCCTTGACTACGGCATCGGGAGCGGTGTCGTATATGTTGAAAACAAGATCGCTGTGGCAGTCGGGCTCGGGTAAGTCCGACGAGAAGCCTTGTAGGACTCCGAGGGGTCCAGCAAAGACAACGTAG

Protein sequence

MTGINLKIRRAHALLKKVDSEALQSFFSGHFSDGKVLWNQNQLSRFHFRINLITHKRLSNLNPTRPARYIYQLHRRVGNIHRRSHGIGLKLLKNCRQPRFPNKWKLLFLTDPPPLTTASGAVSYMLKTRSLWQSGSGKSDEKPCRTPRGPAKTT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G018850CsGy3G018850gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G018850.1CsGy3G018850.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G018850.1.exon.1CsGy3G018850.1.exon.1exon
CsGy3G018850.1.exon.2CsGy3G018850.1.exon.2exon
CsGy3G018850.1.exon.3CsGy3G018850.1.exon.3exon
CsGy3G018850.1.exon.4CsGy3G018850.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G018850.1.CDS.1CsGy3G018850.1.CDS.1CDS
CsGy3G018850.1.CDS.2CsGy3G018850.1.CDS.2CDS
CsGy3G018850.1.CDS.3CsGy3G018850.1.CDS.3CDS
CsGy3G018850.1.CDS.4CsGy3G018850.1.CDS.4CDS


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..154