CsGy3G018410.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G018410.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ethylene-responsive transcription factor ERF109
Location	Chr3 : 14555100 .. 14555747 (-)
Sequence length	648

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTGGCGCCAAAATCAAACCCCCTCCCTTCATTCCATTCCGACTCCTTCTCCCCCTCTGCAACCATTTCTTCCTTCACTTCTTCCACTACCCACCCAATTTTCCCTCCCTCTGTTTTCGAAACTTGTACCGTTTGTCAAATCCAAGGTTGTTTAGGATGCAATTTCTTTCCTCCCTCCGCCTCCTCGTCCTCCCAGCTTTCCTCCGAGAAGAAGACTGCAAATAAGCGGTCGAAGAAGACTTATAGAGGCGTTCGGCAGCGGCCCTGGGGGAAATGGGCCGCGGAGATCCGAAATCCGAAACTGGCGACTAGAGTTTGGTTAGGGACGTTCAATACTGCTGAAGAAGCTGCTAGGGCTTATGATAAAGCGGCGTTGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATGATTCGTTGAGAATGATGAGTTCGGAGCGGGAAATACAGAGGACGGAAAGTGAAATTTCGAGGAACAGTAGCAATTCGGCGGGGATTGGAATCGGGAATGAAGATGAAATATGGGGGAAAATTGCTAAAGATGAAATGGATCAATGGATGTCGACGTTGATGACAGATCACGGCGGCGATTCCTCGGATTCCGCCAGTATTGGAACTTGGGAATTTTCCTGA

mRNA sequence

ATGCCTTTGGCGCCAAAATCAAACCCCCTCCCTTCATTCCATTCCGACTCCTTCTCCCCCTCTGCAACCATTTCTTCCTTCACTTCTTCCACTACCCACCCAATTTTCCCTCCCTCTGTTTTCGAAACTTGTACCGTTTGTCAAATCCAAGGTTGTTTAGGATGCAATTTCTTTCCTCCCTCCGCCTCCTCGTCCTCCCAGCTTTCCTCCGAGAAGAAGACTGCAAATAAGCGGTCGAAGAAGACTTATAGAGGCGTTCGGCAGCGGCCCTGGGGGAAATGGGCCGCGGAGATCCGAAATCCGAAACTGGCGACTAGAGTTTGGTTAGGGACGTTCAATACTGCTGAAGAAGCTGCTAGGGCTTATGATAAAGCGGCGTTGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATGATTCGTTGAGAATGATGAGTTCGGAGCGGGAAATACAGAGGACGGAAAGTGAAATTTCGAGGAACAGTAGCAATTCGGCGGGGATTGGAATCGGGAATGAAGATGAAATATGGGGGAAAATTGCTAAAGATGAAATGGATCAATGGATGTCGACGTTGATGACAGATCACGGCGGCGATTCCTCGGATTCCGCCAGTATTGGAACTTGGGAATTTTCCTGA

Coding sequence (CDS)

ATGCCTTTGGCGCCAAAATCAAACCCCCTCCCTTCATTCCATTCCGACTCCTTCTCCCCCTCTGCAACCATTTCTTCCTTCACTTCTTCCACTACCCACCCAATTTTCCCTCCCTCTGTTTTCGAAACTTGTACCGTTTGTCAAATCCAAGGTTGTTTAGGATGCAATTTCTTTCCTCCCTCCGCCTCCTCGTCCTCCCAGCTTTCCTCCGAGAAGAAGACTGCAAATAAGCGGTCGAAGAAGACTTATAGAGGCGTTCGGCAGCGGCCCTGGGGGAAATGGGCCGCGGAGATCCGAAATCCGAAACTGGCGACTAGAGTTTGGTTAGGGACGTTCAATACTGCTGAAGAAGCTGCTAGGGCTTATGATAAAGCGGCGTTGGAGTTCCGAGGGCCGCGAGCGAAGCTTAATTTTCCGTTTACGGATGATTCGTTGAGAATGATGAGTTCGGAGCGGGAAATACAGAGGACGGAAAGTGAAATTTCGAGGAACAGTAGCAATTCGGCGGGGATTGGAATCGGGAATGAAGATGAAATATGGGGGAAAATTGCTAAAGATGAAATGGATCAATGGATGTCGACGTTGATGACAGATCACGGCGGCGATTCCTCGGATTCCGCCAGTATTGGAACTTGGGAATTTTCCTGA

Protein sequence

MPLAPKSNPLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS

Homology

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BLAST of CsGy3G018410.1 vs. NCBI nr
Match: XP_004140802.1 (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus] >KGN57539.1 hypothetical protein Csa_3G207390 [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 6.6e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 9   PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL 68
           PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL
Sbjct: 68  PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL 127

Query: 69  SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 128
           SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE
Sbjct: 128 SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 187

Query: 129 FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM 188
           FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM
Sbjct: 188 FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM 247

Query: 189 DQWMSTLMTDHGGDSSDSASIGTWEFS 216
           DQWMSTLMTDHGGDSSDSASIGTWEFS
Sbjct: 248 DQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]

BLAST of CsGy3G018410.1 vs. NCBI nr
Match: XP_008456122.1 (PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 8.4e-75
Identity = 146/171 (85.38%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 45  TVCQIQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLA 104
           +VCQI+GCLGCNFFPP   SSSQ++ EKK  NKRSKKTYRGVRQRPWGKWAAEIRNPKLA
Sbjct: 107 SVCQIEGCLGCNFFPP---SSSQVNVEKKIGNKRSKKTYRGVRQRPWGKWAAEIRNPKLA 166

Query: 105 TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRN 164
           TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRT       
Sbjct: 167 TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTXXXXXXX 226

Query: 165 SSNSAGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 216
                   IGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS
Sbjct: 227 XXXXXXXXIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]

BLAST of CsGy3G018410.1 vs. NCBI nr
Match: XP_022942387.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 149/205 (72.68%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 15  SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQLSSEKKT 74
           SDSFS S T      S+T  I  PSVFETC+VC+I GCLGC+FFPP    SSQ+ +EKK+
Sbjct: 81  SDSFSVSGTXXXXXCSSTDAILGPSVFETCSVCRIDGCLGCDFFPP----SSQVDNEKKS 140

Query: 75  ANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRA 134
             KRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAA EFRGPRA
Sbjct: 141 GKKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAAWEFRGPRA 200

Query: 135 KLNFPFTDDSLRMMSSEREIQRTESE----ISRNSSNSAGIGIGNEDEIWGKIAKDEMDQ 194
           KLNFPFTDDSLRMMSSE++ QR E E              IG+GN+DEIWGKIAKDE DQ
Sbjct: 201 KLNFPFTDDSLRMMSSEQQEQRPEIEXXXXXXXXXXXXXXIGVGNDDEIWGKIAKDEADQ 260

Query: 195 WMSTLMTDHGGDSSDSASIGTWEFS 216
           WMS+LMT HGG+S DSAS G WEFS
Sbjct: 261 WMSSLMTYHGGESPDSASTGIWEFS 281

[Close]

BLAST of CsGy3G018410.1 vs. NCBI nr
Match: XP_023552853.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.4 bits (716), Expect = 5.1e-72
Identity = 150/209 (71.77%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 9   PLPSFH-------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPS 68
           PLP+F        SD FS SAT SS + S+T  IF PSVFETC+VC+I GCLGC+FFPP 
Sbjct: 12  PLPTFDCAASASASDFFSASATTSSISCSSTDAIFSPSVFETCSVCRIDGCLGCDFFPP- 71

Query: 69  ASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARA 128
             SSS +  E K+  KR KK YRGVRQRPWGKW AEIRNPKLATRVWLGTFNTAEEAARA
Sbjct: 72  --SSSPVEGETKSGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARA 131

Query: 129 YDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWG 188
           YDKAALEFRGPRAKLNFPFTDDSLR M       R E+EIS+N  NSA  GI NEDEIW 
Sbjct: 132 YDKAALEFRGPRAKLNFPFTDDSLRTM-------RPENEISKNGRNSAANGIENEDEIWR 191

Query: 189 KIAKDEMDQWMSTLMTDHGGDSSDSASIG 211
           KI KDEMDQW+S+L+TDHGGDSSDS SIG
Sbjct: 192 KIEKDEMDQWISSLITDHGGDSSDSTSIG 210

[Close]

BLAST of CsGy3G018410.1 vs. NCBI nr
Match: XP_022984696.1 (ethylene-responsive transcription factor ERF109-like [Cucurbita maxima])

HSP 1 Score: 280.0 bits (715), Expect = 6.7e-72
Identity = 151/209 (72.25%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 9   PLPSFH-------SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPS 68
           PLP+F        SD FS SAT SS T S+T  IF PS FETC+VC+I GCLGCNFFPP 
Sbjct: 34  PLPTFDCAASASASDFFSASATTSSVTCSSTDAIFSPSGFETCSVCRIDGCLGCNFFPP- 93

Query: 69  ASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARA 128
             SSS +  EK +  KR KK YRGVRQRPWGKW AEIRNPKLATRVWLGTFNTAEEAARA
Sbjct: 94  --SSSPVEGEKISGKKRLKKIYRGVRQRPWGKWVAEIRNPKLATRVWLGTFNTAEEAARA 153

Query: 129 YDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWG 188
           YDKAALEFRGPRAKLNFPFTDDSLR M       R E+EIS+N  NSA  GI NEDEIW 
Sbjct: 154 YDKAALEFRGPRAKLNFPFTDDSLRTM-------RPENEISKNGRNSAANGIENEDEIWR 213

Query: 189 KIAKDEMDQWMSTLMTDHGGDSSDSASIG 211
           KI KDEMDQW+S+L+TDHGGDSSDS SIG
Sbjct: 214 KIEKDEMDQWISSLITDHGGDSSDSTSIG 232

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BLAST of CsGy3G018410.1 vs. TAIR10
Match: AT4G34410.1 (redox responsive transcription factor 1)

HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26
Identity = 73/159 (45.91%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 9   PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCN-FFPPS------ 68
           P   F SDS   SA +    S            +TC VC+I+GCLGCN FF P+      
Sbjct: 49  PCQGFSSDSTVISAGMPRLDS------------DTCQVCRIEGCLGCNYFFAPNQRIEXX 108

Query: 69  ------------------ASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKL 128
                                                  YRGVRQRPWGK+AAEIR+PK 
Sbjct: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGYRGVRQRPWGKFAAEIRDPKR 168

Query: 129 ATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTD 143
           ATRVWLGTF TAE+AARAYD+AA+ FRGPRAKLNFPF D
Sbjct: 169 ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 195

[Close]

BLAST of CsGy3G018410.1 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 59  PPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEA 118
           P S    S   + ++ +N R ++ YRGVRQRPWGKWAAEIR+P  A RVWLGTF+TAEEA
Sbjct: 47  PSSIDDQSSSLTLQEKSNSR-QRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEA 106

Query: 119 ARAYDKAALEFRGPRAKLNFP 140
           A AYDKAA EFRG +AKLNFP
Sbjct: 107 ALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of CsGy3G018410.1 vs. TAIR10
Match: AT1G53910.1 (related to AP2 12)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 72  KKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRG 131
           +K+AN++ K  YRG+RQRPWGKWAAEIR+P+   R+WLGTF TAEEAARAYD AA   RG
Sbjct: 114 EKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRG 173

Query: 132 PRAKLNFP 140
            +AK+NFP
Sbjct: 174 SKAKVNFP 181

[Close]

BLAST of CsGy3G018410.1 vs. TAIR10
Match: AT5G13330.1 (related to AP2 6l)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 59  PPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEA 118
           PP      +    +   ++  ++ YRGVRQRPWGKWAAEIR+PK A RVWLGTF TAEEA
Sbjct: 15  PPVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEA 74

Query: 119 ARAYDKAALEFRGPRAKLNFP 140
           A AYD+AAL+F+G +AKLNFP
Sbjct: 75  ALAYDRAALKFKGTKAKLNFP 95

[Close]

BLAST of CsGy3G018410.1 vs. TAIR10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 70  SEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEF 129
           SE++   +  K  YRG+RQRPWGKWAAEIR+P    RVWLGTF TA+EAARAYD AA++ 
Sbjct: 37  SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKI 96

Query: 130 RGPRAKLNFPFT 142
           RG +AKLNFP T
Sbjct: 97  RGRKAKLNFPNT 108

[Close]

BLAST of CsGy3G018410.1 vs. Swiss-Prot
Match: sp|Q9SZ06|EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.3e-25
Identity = 73/159 (45.91%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 9   PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCN-FFPPS------ 68
           P   F SDS   SA +    S            +TC VC+I+GCLGCN FF P+      
Sbjct: 49  PCQGFSSDSTVISAGMPRLDS------------DTCQVCRIEGCLGCNYFFAPNQRIEXX 108

Query: 69  ------------------ASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKL 128
                                                  YRGVRQRPWGK+AAEIR+PK 
Sbjct: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGYRGVRQRPWGKFAAEIRDPKR 168

Query: 129 ATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTD 143
           ATRVWLGTF TAE+AARAYD+AA+ FRGPRAKLNFPF D
Sbjct: 169 ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 195

[Close]

BLAST of CsGy3G018410.1 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-22
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 59  PPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEA 118
           P S    S   + ++ +N R ++ YRGVRQRPWGKWAAEIR+P  A RVWLGTF+TAEEA
Sbjct: 47  PSSIDDQSSSLTLQEKSNSR-QRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEA 106

Query: 119 ARAYDKAALEFRGPRAKLNFP 140
           A AYDKAA EFRG +AKLNFP
Sbjct: 107 ALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of CsGy3G018410.1 vs. Swiss-Prot
Match: sp|Q9SSA8|RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-21
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 72  KKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRG 131
           +K+AN++ K  YRG+RQRPWGKWAAEIR+P+   R+WLGTF TAEEAARAYD AA   RG
Sbjct: 114 EKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRG 173

Query: 132 PRAKLNFP 140
            +AK+NFP
Sbjct: 174 SKAKVNFP 181

[Close]

BLAST of CsGy3G018410.1 vs. Swiss-Prot
Match: sp|Q9LYU3|EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21
Identity = 49/81 (60.49%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 59  PPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEA 118
           PP      +    +   ++  ++ YRGVRQRPWGKWAAEIR+PK A RVWLGTF TAEEA
Sbjct: 15  PPVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEA 74

Query: 119 ARAYDKAALEFRGPRAKLNFP 140
           A AYD+AAL+F+G +AKLNFP
Sbjct: 75  ALAYDRAALKFKGTKAKLNFP 95

[Close]

BLAST of CsGy3G018410.1 vs. Swiss-Prot
Match: sp|Q9FGF8|ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-21
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 80  KKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFP 139
           ++ YRGVRQRPWGKWAAEIR+P  A RVWLGTF+ AE AARAYD+AAL FRG +AKLNFP
Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241

Query: 140 FTDDSLRMMSSERE-IQRTESEISRNSSNS 169
                +R  S+E + + +T ++    S NS
Sbjct: 242 ENVKLVRPASTEAQPVHQTAAQRPTQSRNS 271

[Close]

BLAST of CsGy3G018410.1 vs. TrEMBL
Match: tr|A0A0A0L9A3|A0A0A0L9A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207390 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.4e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 9   PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL 68
           PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL
Sbjct: 68  PLPSFHSDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQL 127

Query: 69  SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 128
           SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE
Sbjct: 128 SSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALE 187

Query: 129 FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM 188
           FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM
Sbjct: 188 FRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEM 247

Query: 189 DQWMSTLMTDHGGDSSDSASIGTWEFS 216
           DQWMSTLMTDHGGDSSDSASIGTWEFS
Sbjct: 248 DQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]

BLAST of CsGy3G018410.1 vs. TrEMBL
Match: tr|A0A1S3C3R9|A0A1S3C3R9_CUCME (ethylene-responsive transcription factor ERF109 OS=Cucumis melo OX=3656 GN=LOC103496155 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.6e-75
Identity = 146/171 (85.38%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 45  TVCQIQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLA 104
           +VCQI+GCLGCNFFPP   SSSQ++ EKK  NKRSKKTYRGVRQRPWGKWAAEIRNPKLA
Sbjct: 107 SVCQIEGCLGCNFFPP---SSSQVNVEKKIGNKRSKKTYRGVRQRPWGKWAAEIRNPKLA 166

Query: 105 TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTESEISRN 164
           TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRT       
Sbjct: 167 TRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSEREIQRTXXXXXXX 226

Query: 165 SSNSAGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 216
                   IGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS
Sbjct: 227 XXXXXXXXIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDSASIGTWEFS 274

[Close]

BLAST of CsGy3G018410.1 vs. TrEMBL
Match: tr|A0A067LCS4|A0A067LCS4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01609 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-47
Identity = 101/175 (57.71%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 33  HPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQLSSEKKTANKRSKKTYRGVRQRPWG 92
           +PI PPS  +TC +C+I+GCLGCNFFPP+         EKK   KR KK YRGVRQRPWG
Sbjct: 67  NPIPPPSDLDTCNICKIKGCLGCNFFPPN-------QEEKKGTRKRVKKNYRGVRQRPWG 126

Query: 93  KWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRAKLNFPFTDDSLRMMSSER 152
           KWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++FRGPRAKLNFPF D++   +  + 
Sbjct: 127 KWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRAKLNFPFPDNTASNLEGQS 186

Query: 153 EIQ-RTESEISRNSSNSAGIGIGNEDEIWGKIAKDEMDQWMSTLMTDHGGDSSDS 207
             Q + + E  +       + +G E E W KI +DE+ QWM+  M D  GDSSDS
Sbjct: 187 TPQEQQQKENGKRKELEVEMQVGKEYEFWEKIGEDEIQQWMN--MMDFNGDSSDS 232

[Close]

BLAST of CsGy3G018410.1 vs. TrEMBL
Match: tr|A0A2C9V3H0|A0A2C9V3H0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G056300 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47
Identity = 105/199 (52.76%), Postives = 132/199 (66.33%), Query Frame = 0


Query: 15  SDSFSPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCNFFPPSASSSSQLSSEKKT 74
           S  F+ S++ ++ T     P+ PPS  +TC VC+I+GCLGCNFFPP+         EKK 
Sbjct: 71  SSQFATSSSATTVTDGFCSPLLPPSDLDTCNVCKIKGCLGCNFFPPN-------QEEKKG 130

Query: 75  ANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFRGPRA 134
             KR KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++FRGPRA
Sbjct: 131 KRKRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFRGPRA 190

Query: 135 KLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNE--DEIWGKIAKDEMDQWM 194
           KLNFPF D+     + E +    + +  + +  +       E   E W KI +DE+ QWM
Sbjct: 191 KLNFPFPDNIGNTSNLEDQKSTDQEQEQKENGKTKEFEAERELGKEFWEKIGEDEIQQWM 250

Query: 195 STLMTDHGGDSSDSASIGT 212
           +  M D GG+SSDS+ I T
Sbjct: 251 T--MMDFGGNSSDSSGIAT 260

[Close]

BLAST of CsGy3G018410.1 vs. TrEMBL
Match: tr|A0A0C5AHM3|A0A0C5AHM3_BETPL (ERF2 protein OS=Betula platyphylla OX=78630 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 106/201 (52.74%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 19  SPSATISSFTSSTTHPIFPPSVFETCTVCQIQGCLGCN-FFPPSASS-------SSQLSS 78
           S +A+ S + +  T    PPS  +TC VC+I GCLGCN FFPP+                
Sbjct: 31  STTASTSEYCADATP--LPPSELDTCQVCKIDGCLGCNFFFPPTHQDRXXXXXXXXXXXP 90

Query: 79  EKKTANKRSKKTYRGVRQRPWGKWAAEIRNPKLATRVWLGTFNTAEEAARAYDKAALEFR 138
           +   + +R KK YRGVRQRPWGKWAAEIR+P+ ATRVWLGTFNTAEEAARAYDKAA++FR
Sbjct: 91  KLGVSKRRVKKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDKAAIDFR 150

Query: 139 GPRAKLNFPFTDDSLRMMSSEREIQRTESEISRNSSNSAGIGIGNEDEIWGKIAKDEMDQ 198
           GPRAKLNFPF D +          +   S+ S  S     IGIG E+E W  I +DE+ Q
Sbjct: 151 GPRAKLNFPFPDYA--------PAETPNSQPSTTSLEQQEIGIGRENEFWEGIGEDEIQQ 210

Query: 199 WMSTLMTDHGGDSSDSASIGT 212
           WM  +M D  GDSSDSA+ GT
Sbjct: 211 WM--MMMDFAGDSSDSAATGT 219

The following BLAST results are available for this feature:

BLAST of CsGy3G018410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140802.1	6.6e-112	100.00	PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis sativus] >KG...	[more]
XP_008456122.1	8.4e-75	85.38	PREDICTED: ethylene-responsive transcription factor ERF109 [Cucumis melo]	[more]
XP_022942387.1	2.7e-73	72.68	ethylene-responsive transcription factor ERF109-like [Cucurbita moschata]	[more]
XP_023552853.1	5.1e-72	71.77	ethylene-responsive transcription factor ERF109-like [Cucurbita pepo subsp. pepo...	[more]
XP_022984696.1	6.7e-72	72.25	ethylene-responsive transcription factor ERF109-like [Cucurbita maxima]	[more]

BLAST of CsGy3G018410.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34410.1	5.1e-26	45.91	redox responsive transcription factor 1	[more]
AT2G33710.2	5.3e-23	65.43	Integrase-type DNA-binding superfamily protein	[more]
AT1G53910.1	1.5e-22	67.65	related to AP2 12	[more]
AT5G13330.1	2.6e-22	60.49	related to AP2 6l	[more]
AT2G47520.1	3.4e-22	65.28	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CsGy3G018410.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZ06\|EF109_ARATH	9.3e-25	45.91	Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P93007\|EF112_ARATH	9.6e-22	65.43	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SSA8\|RA212_ARATH	2.8e-21	67.65	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9LYU3\|EF113_ARATH	4.8e-21	60.49	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FGF8\|ABR1_ARATH	6.2e-21	58.89	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsGy3G018410.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9A3\|A0A0A0L9A3_CUCSA	4.4e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207390 PE=4 SV=1	[more]
tr\|A0A1S3C3R9\|A0A1S3C3R9_CUCME	5.6e-75	85.38	ethylene-responsive transcription factor ERF109 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A067LCS4\|A0A067LCS4_JATCU	2.2e-47	57.71	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01609 PE=4 SV=1	[more]
tr\|A0A2C9V3H0\|A0A2C9V3H0_MANES	3.8e-47	52.76	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G056300 PE=4 SV=...	[more]
tr\|A0A0C5AHM3\|A0A0C5AHM3_BETPL	1.5e-43	52.74	ERF2 protein OS=Betula platyphylla OX=78630 GN=ERF2 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G018410	CsGy3G018410	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G018410.1.CDS.1	CsGy3G018410.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G018410.1	CsGy3G018410.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 105..121 score: 74.65 coord: 83..94 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 82..145 e-value: 3.6E-38 score: 142.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 83..131 e-value: 1.1E-14 score: 54.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 82..139 score: 24.843
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 83..139 e-value: 1.57376E-34 score: 118.143
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 81..141 e-value: 9.6E-32 score: 110.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..215
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 15..169
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 82..140