CsGy3G007550.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGGTTAGAGGTTAATTGGACGACTTTGATCAGTCTGGTTTTGTACTCGTATCGGACTTTGGTGAATTAACTGAACAGATTAGTTTTGATTCGTCAGTATGCCGTGAATTTAGCTAATTTCCAGGAGGAATGGGATTTTGAGTTTTTGGCAGCTTAGTTAGCTTAATTTGTTAATGTTTGATTCGAACTATCAACCTTGTTGAAGTGAACAGTGAAATTGATCAGGGGATGAAAAAATACTTCAGTGGGTGTCAGTTTCTTTGGTCGCATTAGATTATTTGTTGCTGATGCCTGATTTTAGTCATGCTGTTTATCTTGGGCAGTTTGTTCGCTTGGCTTGATGTTGTGCTTAAATTCGAGAATCTTCTTAGTTGAATTTAGGTGTTTTGATTTTGAGTGGTTGATTCATGCCTATTTTTCATGTCGTTTTTTTCTGTTGGTATTATCCGCTTCTTTAAATTTAGAGGTTTAGGGTGTGGGATAAAACTAAAAGTTCTAACTTTCATAAACCTCATTTCAAAACTACTCATAGAATATAATATTTTAGAATGTTGAACAGAAAGTGTAATGATGGAGTTAAGTCTAAAAGAATGACATTCAAGCACAAACCTTTTGTCCAAAATTCTAATGTTTTTTCTACTTCAAGATAATTTTGAAACCTTTATGGAGCATTTTTTAATAAAGGACAAAGTTCAAGAGTGTTTTTTTCAAATAAAATAAAATATAGTCTAAATTCTGGTACACTTGGAAACCGCATACAAGTTGAGGCTTTGCCTCCTTCAAGTGGCAATCCTTATGGTAAAGGTTTGATGCTTTGGGTGGGAATTTAACCTTTCATTGTCTTTCCGTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAAGTAACAGATGCTTTTTTCGGTTAATAAGAATAACTGTAGAGTATCTGTTGTTTGTTTAGGAGTATGAATGGTTTATTTGTTTGTTTTTAATATCATAGCTTCACTGTAATTGGTATGTGATAGGCAGAGGTAATTTGAACATATTAAGAGCGATGCTTTTTCACATAGGTGAAAGCCTCCATGATCAACAAGGTGGTAGGTAGCATTCATGGTTATGAGAGGCTTGTGATATAGAAATAGGATATCGATGACACTGTTATGAACTTAGAAGAACTTTGACGACCAGAAATGGTTTTCCTTTTCCCTTGTTGTTCTAATGGGTGAACAAACGAAGCCATTGTTATCAGTTCTTACAAAATCATGGGTTGGCGAAACGATTTCAATGGATGCAGAATTTCTTAAGAAGTGTTTTGATCTGGACGAAAGAAAAGGAGAACACGTCTGAAAAAGAAATTTACTAGATCTAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAACTTCACTGTAATTGGTATGTGATAGGCAGAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA ATGGAGGAGAACGGAGGAAGCGACGCTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGCGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTATCGGTGATTCCAGCAACATGCCCCTCAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTACAATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACCTCACTGCTTTTCTACTGTGTATTTATCAGTCGCATTTTTTCTTCTTCCCTCCCCCTCATCCTGGATTAGAAAGCGGTGTTGAACTCAATTCTGAAGCCTTCTGTCAGTTCAATGCACAACTTCACTGTAATTGGTATGTGATAGGCAGAGAAATGGGTGATGAAGTGAATGGTACGATTACTAATGTTTGGTTTTGGGGTGTACTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAASSTIASLKASGIHKVHLTAFLLCIYQSHFFFFPPPHPGLESGVELNSEAFCQFNAQLHCNWYVIGREMGDEVNGTITNVWFWGVLEQVEDVMEVGARIRSGLGIRSRAQDK
BLAST of CsGy3G007550.1 vs. NCBI nr
Match: XP_004133779.1 (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hypothetical protein Csa_3G118070 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 3.9e-35 Identity = 97/170 (57.06%), Postives = 97/170 (57.06%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. NCBI nr
Match: XP_022974845.1 (uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308.1 uncharacterized protein LOC111474468 isoform X1 [Cucurbita maxima]) HSP 1 Score: 127.9 bits (320), Expect = 3.3e-26 Identity = 81/170 (47.65%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata]) HSP 1 Score: 127.5 bits (319), Expect = 4.4e-26 Identity = 81/170 (47.65%), Postives = 85/170 (50.00%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. NCBI nr
Match: XP_023540026.1 (uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.1 bits (318), Expect = 5.7e-26 Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. NCBI nr
Match: XP_022145350.1 (uncharacterized protein LOC111014824 [Momordica charantia]) HSP 1 Score: 126.3 bits (316), Expect = 9.7e-26 Identity = 81/170 (47.65%), Postives = 87/170 (51.18%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TAIR10
Match: AT3G60480.1 (unknown protein) HSP 1 Score: 81.3 bits (199), Expect = 6.5e-16 Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TrEMBL
Match: tr|A0A0A0L700|A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35 Identity = 97/170 (57.06%), Postives = 97/170 (57.06%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TrEMBL
Match: tr|A0A1S3AUW2|A0A1S3AUW2_CUCME (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21 Identity = 76/153 (49.67%), Postives = 77/153 (50.33%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TrEMBL
Match: tr|F6GV86|F6GV86_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02030 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.8e-18 Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TrEMBL
Match: tr|A0A2I4HDZ6|A0A2I4HDZ6_9ROSI (uncharacterized protein LOC109016350 OS=Juglans regia OX=51240 GN=LOC109016350 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.6e-16 Identity = 64/169 (37.87%), Postives = 77/169 (45.56%), Query Frame = 0
BLAST of CsGy3G007550.1 vs. TrEMBL
Match: tr|A0A2P5YGW3|A0A2P5YGW3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05737 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.9e-16 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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