CsGy2G022170.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy2G022170.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 30570852 .. 30571088 (-)
Sequence length237
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCACATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGTAGTTTTTGAAGAAATGCCGACAAATTGTGGTTGCTGGACGAGAAAATTGATCTTCGATCTTGGATCCAGGAGTTTACGACGATCTCCGATGAACCCTAGTTGA

mRNA sequence

ATGCCGCACATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGTAGTTTTTGAAGAAATGCCGACAAATTGTGGTTGCTGGACGAGAAAATTGATCTTCGATCTTGGATCCAGGAGTTTACGACGATCTCCGATGAACCCTAGTTGA

Coding sequence (CDS)

ATGCCGCACATATACTGGATCGCACGAACCATCGATGCTTTTCCAAGAAAGAGGCAAGAAACTAAACACATGGACAGGAAGAGAAGAGAAGCACAACCAGCTTGTAGAGTATCGAATTACAACTACTTAGCTGTAGTTTTTGAAGAAATGCCGACAAATTGTGGTTGCTGGACGAGAAAATTGATCTTCGATCTTGGATCCAGGAGTTTACGACGATCTCCGATGAACCCTAGTTGA

Protein sequence

MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAVVFEEMPTNCGCWTRKLIFDLGSRSLRRSPMNPS
Homology
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BLAST of CsGy2G022170.1 vs. NCBI nr
Match: KGN62830.1 (hypothetical protein Csa_2G375220 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAVVFE 49
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA  F+
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLARSFQ 48

[Close]
BLAST of CsGy2G022170.1 vs. TrEMBL
Match: tr|A0A0A0LLL1|A0A0A0LLL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-18
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLAVVFE 49
          MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLA  F+
Sbjct: 1  MPHIYWIARTIDAFPRKRQETKHMDRKRREAQPACRVSNYNYLARSFQ 48

The following BLAST results are available for this feature:
BLAST of CsGy2G022170.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62830.11.0e-1793.75hypothetical protein Csa_2G375220 [Cucumis sativus][more]
BLAST of CsGy2G022170.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G022170.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G022170.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LLL1|A0A0A0LLL1_CUCSA6.6e-1893.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G375220 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy2G022170CsGy2G022170gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G022170.1.CDS.1CsGy2G022170.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G022170.1.exon.1CsGy2G022170.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy2G022170.1CsGy2G022170.1-proteinpolypeptide