CsGy2G022040.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy2G022040.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 30499035 .. 30499296 (+)
Sequence length225
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCGTAATTTTCATTTATTTTTCAACTAGGTCTAATTAAGGAACGGAAAAGACAGTTTTACCCTTGTATCTAGTTCTCCTTCTCCGATTATCCACAGACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

mRNA sequence

ATGCAGCGAACGGAAAAGACAGTTTTACCCTTGTATCTAGTTCTCCTTCTCCGATTATCCACAGACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

Coding sequence (CDS)

ATGCAGCGAACGGAAAAGACAGTTTTACCCTTGTATCTAGTTCTCCTTCTCCGATTATCCACAGACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

Protein sequence

MQRTEKTVLPLYLVLLLRLSTDSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD
Homology
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BLAST of CsGy2G022040.1 vs. NCBI nr
Match: KGN62819.1 (hypothetical protein Csa_2G374610 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-17
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 23 SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 75
          SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD
Sbjct: 4  SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 55

[Close]
BLAST of CsGy2G022040.1 vs. TrEMBL
Match: tr|A0A0A0LP61|A0A0A0LP61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374610 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-17
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 23 SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 75
          SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD
Sbjct: 4  SAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 55

The following BLAST results are available for this feature:
BLAST of CsGy2G022040.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62819.12.8e-17100.00hypothetical protein Csa_2G374610 [Cucumis sativus][more]
BLAST of CsGy2G022040.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G022040.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G022040.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LP61|A0A0A0LP61_CUCSA1.8e-17100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374610 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy2G022040CsGy2G022040gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G022040.1.exon.1CsGy2G022040.1.exon.1exon
CsGy2G022040.1.exon.2CsGy2G022040.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G022040.1.CDS.1CsGy2G022040.1.CDS.1CDS
CsGy2G022040.1.CDS.2CsGy2G022040.1.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy2G022040.1CsGy2G022040.1-proteinpolypeptide