CsGy2G016430.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCCTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCCTCCGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGTATCTTCCTCCCTATCTTCGTCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTCAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTCATCAACCTTGATATTCTTAATCCTAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCTTTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGAAACGGCGGATGAAAAATAATAAGACGAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAGACGATTGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGCCAATGA ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCCTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCCTCCGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGTATCTTCCTCCCTATCTTCGTCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTCAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTCATCAACCTTGATATTCTTAATCCTAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCTTTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGAAACGGCGGATGAAAAATAATAAGACGAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAGACGATTGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGCCAATGA ATGGCGGAGCCGGAGCCGGAGCCGGTTCACCCTCCTCCTCCTCCGCCCGACTCTCTTTTCTTCTCCTCTGGTACCTACGTTGTCCAAATCCCTAAAGACCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTCATCGTCGAACGTCATCGTAACCCCTCCGTCGTCACCTCCTCTCGTCGCCGCTCATGTTGCTTTCGTATCTTCCTCCCTATCTTCGTCCTTCTTCTCCTCATCATCATCCTAGCCCTCCTCCTCCCTCCTCTTCTCACCCTTCCCAAACCCCCTGTCATTGAGCTCAAGAAATTCAAACTCACTCCGTCCACACGCAATTTCCTCATCAACCTTGATATTCTTAATCCTAACTCCGTCGGCTCCATCTCCTTCAAATCTCCCTCACGTGTCTCCCTCTCCTTCCGAAAAAACCAACTTGCCACAACTAAATTCCCTCTCATTCGTCAACAACATGGCTCCGAGAAAAAGGTTGCTTTGTCACTTCGCGCCAAATCGGCGTTCCCTAAGGAGTTGAAACGGCGGATGAAAAATAATAAGACGAAGCTCCACACTTCCTTGTCGTTAAAGATGAATCTTGCTGCCCAGACGATTGGACGACTGTCGAATCGTCGGAATGTCAAATTTGTTGTCACTTGTAGCTTCACTGTCAACACGTTGGGTAAAAATTCACGAATATTATCGCAAGATTGTGAAAGTGAACGCCAATGA MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSRRRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ
BLAST of CsGy2G016430.1 vs. NCBI nr
Match: XP_004150661.1 (PREDICTED: uncharacterized protein LOC101202802 [Cucumis sativus] >KGN62168.1 hypothetical protein Csa_2G307330 [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 3.4e-77 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. NCBI nr
Match: XP_008445591.1 (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo]) HSP 1 Score: 248.4 bits (633), Expect = 2.4e-62 Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. NCBI nr
Match: XP_022997529.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46 Identity = 133/217 (61.29%), Postives = 156/217 (71.89%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. NCBI nr
Match: XP_023537818.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44 Identity = 151/218 (69.27%), Postives = 170/218 (77.98%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. NCBI nr
Match: XP_022952021.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata]) HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44 Identity = 147/218 (67.43%), Postives = 170/218 (77.98%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. TrEMBL
Match: tr|A0A0A0LK43|A0A0A0LK43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.3e-77 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. TrEMBL
Match: tr|A0A1S3BD32|A0A1S3BD32_CUCME (uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 131/147 (89.12%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. TrEMBL
Match: tr|A0A2N9F972|A0A2N9F972_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11605 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12 Identity = 91/222 (40.99%), Postives = 129/222 (58.11%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. TrEMBL
Match: tr|A0A218X562|A0A218X562_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006242 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12 Identity = 73/219 (33.33%), Postives = 104/219 (47.49%), Query Frame = 0
BLAST of CsGy2G016430.1 vs. TrEMBL
Match: tr|B9H747|B9H747_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G166600v3 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-12 Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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