CsGy2G012110.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCCCTTCCCAAAACCCTAGAAAATTAAATTATTGAGAATACTTCCTTTTTTAATATATATAAATATAAAATATTTATGATAAGTATAGTTCCAATAAATAAATAATTTAATGTTTTGACTCCCAAACAAATTTTGTCTATAAATTGGAAAACCAAACCATGGTTAAAACCAATTGTATGAACAAAAAATTATATATTAATTGCTTTGGCTTCTTCTCTCTTTAGCTGTGTTGTGAGAGAAACCATAGATATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGGTAAGCTCTAATTCTTCTTCCTTTTTCCTTAATTAATCTCCTTTCAGATATATATTTATTATATGCTTTTGTTCTAATTTGTTATTTTATTTTTTAATTAAGGATAATTGAAATTGAGTTAGATTTGTGAATATTCATAGCATGATTATCATAAAACCACTGGATCATAATATATATTCTTATGATATAGTTTGGGTTTAGTTTAGTTTTATTGTGTTAATACCTTAAGGCATATATATGTTTCTGTCCCTCTCATCTCACCTATAGTCTTTTTTTTCTTACAAAACAGAAAAAGAAATTTCCTAATTTTCTCTGATATATAATTTGTCTAAAACAGAGTTATGAAGTTCTTTGTTTTTTTTTTTTTTTCCCTTTTTTTAAGCAAATAGAATTTTGTATTCTTCAATGGAGGAATTTGTCATTAAACAGGCTAGTTTTTAAAAACAAATTTGGGTGTTAGTTTTTTCTTTTCTTTTATTGATGATTTTCTTAGAAATCTAAAAGTAAAGAAATTTGTTTAATACCTTATTTTATATATAAATGAGAAGTTAAATACTTTTTACGATTTCAAAACTTGATTTAGTTTTTTTAAAACGTTTTTACAACGAAAGAACAAAAAAAAAAAAAATGGAGGGAGTAATTTTATAAGCTTAAATTATAAAAACTAAATAGTCTAAACAATAATCCTCACATGCAACTGATTTTTAAAGTCACTAAATAGTAATCAAACGGATCGGCAAAGACAACAGAATTTGATGGAGTTGCTTACATGTTTTTGAATGATGGGGTTTAATTACAGCTTGGAGATCTAACCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTAATAGAAGCTGATGATCCTTCTTCAATGGTGGAGTACAATAATAATAAGCAACAAAAAGAGCATTTTTTGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATAACAGTAACCCCACTGCACTTCCAAATTTATCCCCATGAATTCTTCTTATTTCCCAAATATATCCCTTTAAAAACCACAAGAATGTTTTCTCATTTGAATTATTTATCAAACCATATATAATTATTATGTGTAAATTAATATATTTAGTGTGTGGTTTTCTAATTTTATTTAGTTTCAATTGGTTTTGAAAGTATTGATGTCCTATAGCTATGTATGGTGATGATGTACGCAAACAAAGTGGTTCTGATGTAAATTTCCATTATAGGTTATATTGTTACGTTATTGCATATATATTATTTTGTATCTCAATTTTTGTTTAAAGTCTTGACCACTTTGAATGGTATTTTTGAAATGTTTAAAGGAAAGTTTAAGCATTCAATTTTTGTGAGTAGATATGTATTTTAAACCCTCTTTGTATGCTTATTTGATGTCGATACACTCCTACATCACCCTAAAAAAACGAGTGAATGAGTGTTGTTGTATCAACGAAGAAAAGTTAGGAAGTGTTTAATTAGATATGCAATAATCTTTGTCTAAAGAAAGTCATTAATTTTGGTTTTAGTTTTAAATTCAATATGATGGAAAATACAATATGAATAAACATTGTGTTGATTTAGCTGAAATTGACAAATCTCCATTTGAGCTTAAATGTTGAAGAACAATATCAC GTCCCCTTCCCAAAACCCTAGAAAATTAAATTATTGAGAATACTTCCTTTTTTAATATATATAAATATAAAATATTTATGATAAGTATAGTTCCAATAAATAAATAATTTAATGTTTTGACTCCCAAACAAATTTTGTCTATAAATTGGAAAACCAAACCATGGTTAAAACCAATTGTATGAACAAAAAATTATATATTAATTGCTTTGGCTTCTTCTCTCTTTAGCTGTGTTGTGAGAGAAACCATAGATATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGCTTGGAGATCTAACCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTAATAGAAGCTGATGATCCTTCTTCAATGGTGGAGTACAATAATAATAAGCAACAAAAAGAGCATTTTTTGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATAACAGTAACCCCACTGCACTTCCAAATTTATCCCCATGAATTCTTCTTATTTCCCAAATATATCCCTTTAAAAACCACAAGAATGTTTTCTCATTTGAATTATTTATCAAACCATATATAATTATTATGTGTAAATTAATATATTTAGTGTGTGGTTTTCTAATTTTATTTAGTTTCAATTGGTTTTGAAAGTATTGATGTCCTATAGCTATGTATGGTGATGATGTACGCAAACAAAGTGGTTCTGATGTAAATTTCCATTATAGGTTATATTGTTACGTTATTGCATATATATTATTTTGTATCTCAATTTTTGTTTAAAGTCTTGACCACTTTGAATGGTATTTTTGAAATGTTTAAAGGAAAGTTTAAGCATTCAATTTTTGTGAGTAGATATGTATTTTAAACCCTCTTTGTATGCTTATTTGATGTCGATACACTCCTACATCACCCTAAAAAAACGAGTGAATGAGTGTTGTTGTATCAACGAAGAAAAGTTAGGAAGTGTTTAATTAGATATGCAATAATCTTTGTCTAAAGAAAGTCATTAATTTTGGTTTTAGTTTTAAATTCAATATGATGGAAAATACAATATGAATAAACATTGTGTTGATTTAGCTGAAATTGACAAATCTCCATTTGAGCTTAAATGTTGAAGAACAATATCAC ATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGCTTGGAGATCTAACCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTAATAGAAGCTGATGATCCTTCTTCAATGGTGGAGTACAATAATAATAAGCAACAAAAAGAGCATTTTTTGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATAACAGTAACCCCACTGCACTTCCAAATTTATCCCCATGA MKLSIAFFFLLSLLLLGDLTHGRSRKEEGEYWKKIMKEEALPEMLKELLIEADDPSSMVEYNNNKQQKEHFLTNFDPHPNAIIYHAHAHAHNSNPTALPNLSP
BLAST of CsGy2G012110.1 vs. NCBI nr
Match: XP_004148852.1 (PREDICTED: uncharacterized protein LOC101213460 [Cucumis sativus] >KGN61786.1 hypothetical protein Csa_2G245500 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 4.3e-45 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima]) HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18 Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata]) HSP 1 Score: 99.4 bits (246), Expect = 7.7e-18 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. NCBI nr
Match: XP_023534667.1 (organ-specific protein P4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.1 bits (240), Expect = 3.8e-17 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. NCBI nr
Match: XP_023513271.1 (organ-specific protein S2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TAIR10
Match: AT1G49310.1 (unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. Swiss-Prot
Match: sp|P17772|OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 9.6e-04 Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TrEMBL
Match: tr|A0A0A0LP62|A0A0A0LP62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245500 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.9e-45 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TrEMBL
Match: tr|W9R0Z1|W9R0Z1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026929 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.6e-09 Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TrEMBL
Match: tr|A0A2R6RHC4|A0A2R6RHC4_ACTCH (Organ-specific protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07027 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08 Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TrEMBL
Match: tr|A0A2I4FZ60|A0A2I4FZ60_9ROSI (organ-specific protein P4-like OS=Juglans regia OX=51240 GN=LOC109003300 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.2e-08 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of CsGy2G012110.1 vs. TrEMBL
Match: tr|V7AE51|V7AE51_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G046400g PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07 Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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