CsGy2G009730.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G009730.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Self-incompatibility family protein
Location	Chr2 : 9248189 .. 9248556 (+)
Sequence length	501

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATG

mRNA sequence

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATGAAAAGTTCCCCCAATCTCAGATCCTCCTTCTTCCTTCAACAAATCTTTTGCCCAATCTCTGATCCTCCTTCTTCCTTCAACAAATCGTTCGCCCTATCTCCGATCCTCCTTATTCCTTCTTCCTTGGATCTGA

Coding sequence (CDS)

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATG

Protein sequence

MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQ

Homology

[Close]

BLAST of CsGy2G009730.1 vs. NCBI nr
Match: XP_004139019.1 (PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus] >KGN61521.1 hypothetical protein Csa_2G153590 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 8.7e-69
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 121 FQ 123
           FQ
Sbjct: 121 FQ 122

[Close]

BLAST of CsGy2G009730.1 vs. NCBI nr
Match: XP_016902587.1 (PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 9.0e-66
Identity = 115/122 (94.26%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

Query: 121 FQ 123
           FQ
Sbjct: 143 FQ 144

[Close]

BLAST of CsGy2G009730.1 vs. NCBI nr
Match: XP_022964484.1 (S-protein homolog 5-like [Cucurbita moschata])

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-61
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK++DLGGRALQEHDDFSW+VTT
Sbjct: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCG FKKCSWLV EDGFYFS DE+NWKKD
Sbjct: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141

Query: 121 FQ 123
           FQ
Sbjct: 142 FQ 143

[Close]

BLAST of CsGy2G009730.1 vs. NCBI nr
Match: XP_023000578.1 (S-protein homolog 5 [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-61
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK++DLGGRALQEHDDFSW+VTT
Sbjct: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCG FKKCSWLV EDGFYFS DE+NWKKD
Sbjct: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141

Query: 121 FQ 123
           FQ
Sbjct: 142 FQ 143

[Close]

BLAST of CsGy2G009730.1 vs. NCBI nr
Match: XP_023515117.1 (S-protein homolog 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 3.0e-61
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK++DLGGRALQEHDDFSW+VTT
Sbjct: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           K+W +NQF CTMKWDAKR+SFDAFKVPRDFYRCG FKKCSWLV EDGFYFS DE+NWKKD
Sbjct: 82  KMWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141

Query: 121 FQ 123
           FQ
Sbjct: 142 FQ 143

[Close]

BLAST of CsGy2G009730.1 vs. TAIR10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 165.2 bits (417), Expect = 2.5e-41
Identity = 75/120 (62.50%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 3   IIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKL 62
           ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     L
Sbjct: 26  MLQPQTMFL-GEEFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDL 85

Query: 63  WK-SNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDF 122
           W    +++CTMKWD+KR+ F+AFKV RD  RCG  KKCSW V EDGFYFSSDE+ W KDF
Sbjct: 86  WSWMAEYTCTMKWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDF 144

[Close]

BLAST of CsGy2G009730.1 vs. TAIR10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 57.8 bits (138), Expect = 5.5e-09
Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 0


Query: 32  LVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD-- 91
           LV+ C +K  DLG  AL+  +   ++    L ++  ++CT  W    ++FD F+V RD  
Sbjct: 55  LVVHCRNKGKDLGVHALEPQEQIDFRFRVNLRRTTTYTCTFSWPGNAKTFDIFRVDRDDN 114

Query: 92  -FYRCGHFKKCSWLVTEDG 108
               CG  ++C W + E G
Sbjct: 115 SKSTCGICRECIWYICETG 133

[Close]

BLAST of CsGy2G009730.1 vs. TAIR10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-06
Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 28  SSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVP 87
           + L L+  C SK++DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  
Sbjct: 58  NQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDH 117

Query: 88  RDF---YRCGHFKKCSWLVTEDGFYFSSDE 115
           RD     +C    +C W +  +G    +DE
Sbjct: 118 RDSGGDNKC-ESDRCVWKIRRNGPCRFNDE 146

[Close]

BLAST of CsGy2G009730.1 vs. Swiss-Prot
Match: sp|F4JLQ5|SPH2_ARATH (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.9e-05
Identity = 26/90 (28.89%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 28  SSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVP 87
           + L L+  C SK++DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  
Sbjct: 58  NQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDH 117

Query: 88  RDF---YRCGHFKKCSWLVTEDGFYFSSDE 115
           RD     +C    +C W +  +G    +DE
Sbjct: 118 RDSGGDNKC-ESDRCVWKIRRNGPCRFNDE 146

[Close]

BLAST of CsGy2G009730.1 vs. TrEMBL
Match: tr|A0A0A0LNI8|A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.8e-69
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 121 FQ 123
           FQ
Sbjct: 121 FQ 122

[Close]

BLAST of CsGy2G009730.1 vs. TrEMBL
Match: tr|A0A1S4E2Y6|A0A1S4E2Y6_CUCME (uncharacterized protein LOC103499490 OS=Cucumis melo OX=3656 GN=LOC103499490 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 6.0e-66
Identity = 115/122 (94.26%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

Query: 121 FQ 123
           FQ
Sbjct: 143 FQ 144

[Close]

BLAST of CsGy2G009730.1 vs. TrEMBL
Match: tr|A0A2P6QRW7|A0A2P6QRW7_ROSCH (Putative plant self-incompatibility S1 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0396841 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.0e-46
Identity = 87/122 (71.31%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M +++P  L   G  ++VRVINGF NNSSLPLVIWCSSKENDLGGRALQE DDFSW++ T
Sbjct: 20  MSLLEPQNLL--GTEYDVRVINGFTNNSSLPLVIWCSSKENDLGGRALQEKDDFSWRLRT 79

Query: 61  KLW-KSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKK 120
             W  SN F CTMKWD KR+ FDAFK+PRD  RCG F+KCSWLV EDGFYFS+DE+NWKK
Sbjct: 80  NFWGTSNHFVCTMKWDKKRKRFDAFKIPRDVQRCGPFRKCSWLVREDGFYFSNDEVNWKK 139

Query: 121 DF 122
           DF
Sbjct: 140 DF 139

[Close]

BLAST of CsGy2G009730.1 vs. TrEMBL
Match: tr|A0A2N9IS85|A0A2N9IS85_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54932 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-45
Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I+QP+ LY     +EV V+NGF NN SLPLVIWCSSK+ DLGGRALQEHDDFSW++  
Sbjct: 22  MSILQPEHLY--SKEYEVCVVNGFTNNDSLPLVIWCSSKDIDLGGRALQEHDDFSWRLKI 81

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
            LW +  F CTMKWD KR+SFDAFKV RD YRCG  +KCSWLV EDGFYFS+DE+NW+KD
Sbjct: 82  NLWSTTHFLCTMKWDQKRKSFDAFKVSRDIYRCGTLRKCSWLVREDGFYFSNDEVNWRKD 140

Query: 121 F 122
           F
Sbjct: 142 F 140

[Close]

BLAST of CsGy2G009730.1 vs. TrEMBL
Match: tr|A0A2N9J6W1|A0A2N9J6W1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60217 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.6e-45
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 11  LHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSC 70
           LHG  +EV V+NGF +NSSLPLVIWC+SK++DLGGRALQE DDFSW+V T +W +  F C
Sbjct: 31  LHGSEYEVSVVNGFTDNSSLPLVIWCASKDSDLGGRALQERDDFSWRVKTNIWGTTHFWC 90

Query: 71  TMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDF 122
           TMKWD KR+SFDAFKVPRD YRCG  +KCSWLV EDGFYFS+D++NWKKDF
Sbjct: 91  TMKWDQKRKSFDAFKVPRDTYRCGLVRKCSWLVKEDGFYFSNDQVNWKKDF 141

The following BLAST results are available for this feature:

BLAST of CsGy2G009730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139019.1	8.7e-69	100.00	PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus] >KGN61521.1 hy...	[more]
XP_016902587.1	9.0e-66	94.26	PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo]	[more]
XP_022964484.1	1.8e-61	88.52	S-protein homolog 5-like [Cucurbita moschata]	[more]
XP_023000578.1	1.8e-61	88.52	S-protein homolog 5 [Cucurbita maxima]	[more]
XP_023515117.1	3.0e-61	87.70	S-protein homolog 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G009730.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24060.1	2.5e-41	62.50	Plant self-incompatibility protein S1 family	[more]
AT1G26798.1	5.5e-09	31.65	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	4.4e-06	28.89	Plant self-incompatibility protein S1 family	[more]

BLAST of CsGy2G009730.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JLQ5\|SPH2_ARATH	7.9e-05	28.89	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of CsGy2G009730.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNI8\|A0A0A0LNI8_CUCSA	5.8e-69	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=4 SV=1	[more]
tr\|A0A1S4E2Y6\|A0A1S4E2Y6_CUCME	6.0e-66	94.26	uncharacterized protein LOC103499490 OS=Cucumis melo OX=3656 GN=LOC103499490 PE=...	[more]
tr\|A0A2P6QRW7\|A0A2P6QRW7_ROSCH	4.0e-46	71.31	Putative plant self-incompatibility S1 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch...	[more]
tr\|A0A2N9IS85\|A0A2N9IS85_FAGSY	2.0e-45	69.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54932 PE=4 SV=1	[more]
tr\|A0A2N9J6W1\|A0A2N9J6W1_FAGSY	2.6e-45	72.97	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60217 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy2G009730	CsGy2G009730	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G009730.1.CDS.1	CsGy2G009730.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy2G009730.1	CsGy2G009730.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05938	Self-incomp_S1	coord: 18..120 e-value: 7.6E-24 score: 84.1
None	No IPR available	PANTHER	PTHR31232:SF8	SUBFAMILY NOT NAMED	coord: 2..122
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 2..122