CsGy2G002550.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAACAACGAGAGATGCCACCAAATAAACAATACACCACCCAAAAGAAAAAAATAGCGACGGAGATTTCACTTCCATGTTCTTTCGCATCTGCATCTTCCTTCAAATCTTTTATTTATGCAAAATTATATCTTATAACTTCGTTTCTAGATCAACCTCAGCGGGAGAGTTAGTTTTCCCGACTGAAAATGGCAGACCCATCGATTTCTACAACTCTTCTTGCTCAGCTCTGTCTCTGTTTTGCTTTCTACTTGTCTCTCAACATGGGTCGTTCTAAAAACTACGACTTTTTGAAGATTCCTGATCAAAATCCTCTCGATTTCTACTTTATTTCCGTCTGGGGTGGCTTACGATCTGTAAAAGAAGAGACCCTTCTTCTCAAACAGGTGAATTTTTGTGTGTTCATTTTGATTGTCCTTCCTACTTTTGCCTAGATTTTATTAGTTTCTTCACATATGATAGCAGAAACTGCAATGGCGATTCATTTTCTCATTTTTTATAAAGAATGGTGAATCATTCGTTCCAAAACAGCCAAACAAAACAAACTAACGAGCGAAGGGACGAGGATGTCTAACTACTAGAAGAGTAGTTGTCCACATTGGAAAGATTTATGGAGGTGATGGGATCTTAGTTCAGTAAAAGGAGTATATGACTTTGGTTTAGAGTCGTTTTGGTTAGAAACACTTTAGTTGGACTAACTTTAGTCAAATTCCTTTTTGTATTCTCTAGTTTGAGAGTGAATACCAAATAATTTACCAAAGAAATCCCATACCCTTTTCGTGAGAAGGTGACTCCTCAGTTCCTTTGCAAATAACACATATATTTGGAGACTGATCAATTACACACTTGATTGCTATGGTTGAAGACTAATCAACTGTTTCTTTTGTAGCCAATGGGAATTTCTCTTCCCTGTTGGGATTCTTTATCTTTTACTAGAAAGTGAAGCACAATACTCGTCTTTACCTTATCATTGTTCTATGTGCATTAAATTAATTACTAAGAGATGATTTTGAATGTGTTTGAGAATCCTTTAGAATAACCGCTTTGCACTTTTAATTCCAAATAAAATACTTAAGAATAAGCTATTCAAATGTTTGCTTTGCTCCTTGATCGAAGTAAATGGGCCAAAAGTAGTCTATAAAGTGTTGCGTCAGAATTATGATTTTATTTTAAGAAAAGACTTGTTCTAAGTCACTTTATATGACTTTTAAAATAGCTTTAGCTTTATTATAATTGTGTTTCAACCAATTCTAGACCATATGTAATGAGTATCTCCAATATTTTAAACCATGGAGTATATTGATTGATCATTGTCGAATTAAGTGATTGTCGATTGCACTTTTTTTTCTTTTGGGGGGGGGGGGTCTTTATTAAAGGCAATGCTAAGAATGTTCCATGTGAACAATGAAGATGGAGAAGATGGCCAAGGTTTCTCATGCAAAGTTCATCTTGCACATCCGTGAACCGGGTGAAAACGATCGCCTAATGCAGAATGTAAGTATATATTCTTTTTGATAACAAACAAAGAGTTGAAAAAACAAAATATACTGGTTCTGATGTAAATTGATAGTGAGCTTGCTAAAATGTTCATTGGAGACTGAATATGAAATAGATGTCCTCGTTATACATTATATATAATATGTTTACGGATCATTTTAATCTATCAAGATATGCAACTTGGTCTTTCTTCGTGTTTAAGCTGCTAATTCGTTATAGGAAATTATCTTCTCTTTACTTGACATGACAGGGTACGTGGTATTTCTCATCGCTAAAAGTTCCCTGGTATAAGATCCTTCTCAAACGAGTTCTGTGAATTTGGTAAATTTGTGTCCCATGATGTTTGCTGTATAATCTTATAAACACTGATGTTATTTGCACATTCATATCTTTGTGTTACTTCTCTTCATCAGAAATTATGAATGTAGGCACAGCATACGAGCGTCACGAGGAGATGGAGGTCACTTTATTGAGCGAACCAAGTTACAATATGGACAAACATTAGACATCATTGCCATAGATACAGCATTGTTGCAGGTTTGAAATTGCTTCACATCTCTTTATTTTTCTGTCTATTGTCATGCATCCAAGAATTAGAACTTCCTTTTCAAGCTTTTAGTTGTATGATTTGTAGGTATTTGGAATTTTTTGATGCTCTAACATGTTATTATCAAACTTCTAGGAGCCCATCGCAATGGGATCAGCAAGTCAAGCGTTGAAAAGTCATTTACTATGGCTGAAAAGGACTTTGCAAGCATCGAGCAGTAACTGGTAAGACATTTTACGATTATTGTTGAGTAAGTTAACATTCATAATTATTGTGGTGTTACAACCTCTTAAATCTTTCAACTTCTAATCCAACTACTTTTCAATGCCTTTAAGCTTGATGTTGAGATATTAACAATGATTTCATTTACATCACACGTTGTTTCCCTTCCTGCGGTTCTTACTTTATGTGCTCCAAACTTCTCGTTCCGTTTCTGACTATTCTCTATCTCTTGTTTCTTTGAAATGAAGGCGTATAGTTGTTGGGTTTCACCCATTGCTTACTTGTGAAAACAATACTCGATCGCTGGAGACAAAGCATTTGTTTGAGTCAGTCCATCGAATCTTTGTTGAAAATGGGGTGGTAAGTAAGTCAAGTCAAGGGTTTGAATTTCCTCTATTTCAAACTCTTACTATACATTTACATTGAGTCAGAATGCGTACCTTAGTAGACGTGGTTGCACTTACAATGTTCGGATCGGTAGCATAGCTTACATTGGGATTCCTGGTCGTATTCCTATTCAGAAAACACACCTCCAATCTCGAAAATCCTCCTTCAGAGAGTAAGTTCCCTCAACATTTGGTTTGGATTGAATGTGACTATGTTTAGCTTCTATTTAGGCCTTGAGCTGATTGACATTACCAAAACCCACCCACTCTTATATCTATATATTCTCATTGTCTTCATTGTTAATCACTAAATCCATCTTTTATCTGCTACAGATTCTTACTTCAGCACGTCAGCTCATTAGAGATGGTGGGTACCGTGTGATAACATGTTTCGATCGAATACTAGTTGACTTTCATATATGTCTTGCAAATACGACATTTATTAGGAAGTTATATGAGGAGAATGTAATGCAGGCCTTTTCAACAGAACTTGTAGGAATGCTTTGAAAGTTCTAATGTATAATTCTTCCCATGGCAGGTGTTTTACTATGTAAACACAGAAGGAGATGTTGTTCATAAAACTGAACTCCAGCAAAAGGGTAGAGAAGTGATTTGAAAAAACTACTCAACTTTATAGTACCAAGTAAAGAAGTCCTCCCTCTCTATCATCAGGGAAAATGGAAAATTGGGTCAAAAGCGTATATCCTCGACCAAGAGGTTTAGTGTTTTGCAAGTTTCACAAGTTCGAAAACATATAATGAAATCTGAGTTTTTTTTTCTTCTAACAAATTTTGACACACTGATTTGTATCTCTTGTTATTTTCTTGGTACTCCAAAATTGTACTCTAGTTTTATTTGAGAATATCAAAGCAATAGAATAGAATAGAATAGAATGTGTTTGCTCTAAAATTGAGAAGAGACTACGTACAATTCTAATAGTCTTTAGATTAAACATTGAAAATAATACTCATATGTTAATAAATTATCTAACATATTTATGAAAAAAAATATGGAGTTTAATTTTGAC TTAACAACGAGAGATGCCACCAAATAAACAATACACCACCCAAAAGAAAAAAATAGCGACGGAGATTTCACTTCCATGTTCTTTCGCATCTGCATCTTCCTTCAAATCTTTTATTTATGCAAAATTATATCTTATAACTTCGTTTCTAGATCAACCTCAGCGGGAGAGTTAGTTTTCCCGACTGAAAATGGCAGACCCATCGATTTCTACAACTCTTCTTGCTCAGCTCTGTCTCTGTTTTGCTTTCTACTTGTCTCTCAACATGGGTCGTTCTAAAAACTACGACTTTTTGAAGATTCCTGATCAAAATCCTCTCGATTTCTACTTTATTTCCGTCTGGGGTGGCTTACGATCTGTAAAAGAAGAGACCCTTCTTCTCAAACAGATGGAGAAGATGGCCAAGGTTTCTCATGCAAAGTTCATCTTGCACATCCGTGAACCGGGTGAAAACGATCGCCTAATGCAGAATGGTACGTGGTATTTCTCATCGCTAAAAGTTCCCTGGCACAGCATACGAGCGTCACGAGGAGATGGAGGTCACTTTATTGAGCGAACCAAGTTACAATATGGACAAACATTAGACATCATTGCCATAGATACAGCATTGTTGCAGGAGCCCATCGCAATGGGATCAGCAAGTCAAGCGTTGAAAAGTCATTTACTATGGCTGAAAAGGACTTTGCAAGCATCGAGCAGTAACTGGCGTATAGTTGTTGGGTTTCACCCATTGCTTACTTGTGAAAACAATACTCGATCGCTGGAGACAAAGCATTTGTTTGAGTCAGTCCATCGAATCTTTGTTGAAAATGGGGTGAATGCGTACCTTAGTAGACGTGGTTGCACTTACAATGTTCGGATCGGTAGCATAGCTTACATTGGGATTCCTGGTCGTATTCCTATTCAGAAAACACACCTCCAATCTCGAAAATCCTCCTTCAGAGAATTCTTACTTCAGCACGTCAGCTCATTAGAGATGGTGGGTACCGTGTTTTACTATGTAAACACAGAAGGAGATGTTGTTCATAAAACTGAACTCCAGCAAAAGGGTAGAGAAGTGATTTGAAAAAACTACTCAACTTTATAGTACCAAGTAAAGAAGTCCTCCCTCTCTATCATCAGGGAAAATGGAAAATTGGGTCAAAAGCGTATATCCTCGACCAAGAGGTTTAGTGTTTTGCAAGTTTCACAAGTTCGAAAACATATAATGAAATCTGAGTTTTTTTTTCTTCTAACAAATTTTGACACACTGATTTGTATCTCTTGTTATTTTCTTGGTACTCCAAAATTGTACTCTAGTTTTATTTGAGAATATCAAAGCAATAGAATAGAATAGAATAGAATGTGTTTGCTCTAAAATTGAGAAGAGACTACGTACAATTCTAATAGTCTTTAGATTAAACATTGAAAATAATACTCATATGTTAATAAATTATCTAACATATTTATGAAAAAAAATATGGAGTTTAATTTTGAC ATGGCAGACCCATCGATTTCTACAACTCTTCTTGCTCAGCTCTGTCTCTGTTTTGCTTTCTACTTGTCTCTCAACATGGGTCGTTCTAAAAACTACGACTTTTTGAAGATTCCTGATCAAAATCCTCTCGATTTCTACTTTATTTCCGTCTGGGGTGGCTTACGATCTGTAAAAGAAGAGACCCTTCTTCTCAAACAGATGGAGAAGATGGCCAAGGTTTCTCATGCAAAGTTCATCTTGCACATCCGTGAACCGGGTGAAAACGATCGCCTAATGCAGAATGGTACGTGGTATTTCTCATCGCTAAAAGTTCCCTGGCACAGCATACGAGCGTCACGAGGAGATGGAGGTCACTTTATTGAGCGAACCAAGTTACAATATGGACAAACATTAGACATCATTGCCATAGATACAGCATTGTTGCAGGAGCCCATCGCAATGGGATCAGCAAGTCAAGCGTTGAAAAGTCATTTACTATGGCTGAAAAGGACTTTGCAAGCATCGAGCAGTAACTGGCGTATAGTTGTTGGGTTTCACCCATTGCTTACTTGTGAAAACAATACTCGATCGCTGGAGACAAAGCATTTGTTTGAGTCAGTCCATCGAATCTTTGTTGAAAATGGGGTGAATGCGTACCTTAGTAGACGTGGTTGCACTTACAATGTTCGGATCGGTAGCATAGCTTACATTGGGATTCCTGGTCGTATTCCTATTCAGAAAACACACCTCCAATCTCGAAAATCCTCCTTCAGAGAATTCTTACTTCAGCACGTCAGCTCATTAGAGATGGTGGGTACCGTGTTTTACTATGTAAACACAGAAGGAGATGTTGTTCATAAAACTGAACTCCAGCAAAAGGGTAGAGAAGTGATTTGA MADPSISTTLLAQLCLCFAFYLSLNMGRSKNYDFLKIPDQNPLDFYFISVWGGLRSVKEETLLLKQMEKMAKVSHAKFILHIREPGENDRLMQNGTWYFSSLKVPWHSIRASRGDGGHFIERTKLQYGQTLDIIAIDTALLQEPIAMGSASQALKSHLLWLKRTLQASSSNWRIVVGFHPLLTCENNTRSLETKHLFESVHRIFVENGVNAYLSRRGCTYNVRIGSIAYIGIPGRIPIQKTHLQSRKSSFREFLLQHVSSLEMVGTVFYYVNTEGDVVHKTELQQKGREVI
BLAST of CsGy2G002550.1 vs. NCBI nr
Match: XP_004139260.1 (PREDICTED: uncharacterized protein LOC101208944 [Cucumis sativus] >KGN60758.1 hypothetical protein Csa_2G009460 [Cucumis sativus]) HSP 1 Score: 579.7 bits (1493), Expect = 5.5e-162 Identity = 287/291 (98.63%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. NCBI nr
Match: XP_008456552.1 (PREDICTED: uncharacterized protein LOC103496469 [Cucumis melo]) HSP 1 Score: 536.6 bits (1381), Expect = 5.3e-149 Identity = 269/292 (92.12%), Postives = 276/292 (94.52%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. NCBI nr
Match: XP_022142998.1 (uncharacterized protein LOC111012988 isoform X1 [Momordica charantia]) HSP 1 Score: 443.7 bits (1140), Expect = 4.7e-121 Identity = 221/292 (75.68%), Postives = 247/292 (84.59%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. NCBI nr
Match: XP_022142999.1 (uncharacterized protein LOC111012988 isoform X2 [Momordica charantia]) HSP 1 Score: 339.7 bits (870), Expect = 9.6e-90 Identity = 168/226 (74.34%), Postives = 192/226 (84.96%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. NCBI nr
Match: XP_015892481.1 (uncharacterized protein LOC107426730 [Ziziphus jujuba]) HSP 1 Score: 260.4 bits (664), Expect = 7.4e-66 Identity = 141/301 (46.84%), Postives = 198/301 (65.78%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TAIR10
Match: AT4G30993.2 (Calcineurin-like metallo-phosphoesterase superfamily protein) HSP 1 Score: 174.5 bits (441), Expect = 9.7e-44 Identity = 103/291 (35.40%), Postives = 153/291 (52.58%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TrEMBL
Match: tr|A0A0A0LG53|A0A0A0LG53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009460 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 3.6e-162 Identity = 287/291 (98.63%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TrEMBL
Match: tr|A0A1S3C339|A0A1S3C339_CUCME (uncharacterized protein LOC103496469 OS=Cucumis melo OX=3656 GN=LOC103496469 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 3.5e-149 Identity = 269/292 (92.12%), Postives = 276/292 (94.52%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TrEMBL
Match: tr|A0A2I4FP80|A0A2I4FP80_9ROSI (uncharacterized protein LOC109000872 isoform X1 OS=Juglans regia OX=51240 GN=LOC109000872 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.3e-62 Identity = 133/299 (44.48%), Postives = 186/299 (62.21%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TrEMBL
Match: tr|M5WA11|M5WA11_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G260000 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61 Identity = 134/292 (45.89%), Postives = 186/292 (63.70%), Query Frame = 0
BLAST of CsGy2G002550.1 vs. TrEMBL
Match: tr|A0A2P4MF34|A0A2P4MF34_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15614 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.6e-61 Identity = 135/294 (45.92%), Postives = 183/294 (62.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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