CsGy2G002370.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G002370.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	serine/arginine repetitive matrix-like protein
Location	Chr2 : 1547083 .. 1547694 (-)
Sequence length	612

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGTCAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

mRNA sequence

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGTCAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Coding sequence (CDS)

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGTCAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Protein sequence

MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPLPSFAVKNGIATTDLRRLLRLDLE

Homology

[Close]

BLAST of CsGy2G002370.1 vs. NCBI nr
Match: XP_011648719.1 (PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus] >KGN60738.1 hypothetical protein Csa_2G008780 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 3.6e-75
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CsGy2G002370.1 vs. NCBI nr
Match: XP_008456814.1 (PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 171/205 (83.41%), Postives = 174/205 (84.88%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MATVILPPQDCLGKGLRHQGLVLSAPL+SRRN XXXXXXXXXXXXXXXXXXXXX      
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSXXXXXXXXXXXXXXXXXXXXXGRRRRS 60

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGV--GAGGDD 120
                   XXXXXXXXXXX  STTAKM T+SLVMGQVKILKRGEILTP RGV        
Sbjct: 61  ASVGLKANXXXXXXXXXXXXXSTTAKMTTKSLVMGQVKILKRGEILTPGRGVXXXXXXXX 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSV 180
            CGKRRLESK EEVDLVLGSTDRLGPD DLMQKQVVLT+FKDGMYAGSGAFFASPPPSSV
Sbjct: 121 XCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFKDGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFAVKNGIATTDLRRLLRLDLE 204
           PLPSF VKNGIATTDLRRLLRLDLE
Sbjct: 181 PLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of CsGy2G002370.1 vs. NCBI nr
Match: XP_022143251.1 (uncharacterized protein LOC111013161 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 3.0e-50
Identity = 128/206 (62.14%), Postives = 142/206 (68.93%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MATVILPPQDCLG GLR QGLVLSAPL SRRN                            
Sbjct: 1   MATVILPPQDCLGNGLRRQGLVLSAPLKSRRNSKPNPSSSTNPNFNHDVSSGRRRRSPAV 60

Query: 61  XXXXXXXXXXXXXXXXXXXES-STTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDS 120
                    XXXXXXX    + S  AK++ ++LVMGQVKILKRGE+LTPDRGV  GG D 
Sbjct: 61  GVKSNRQANXXXXXXXEPSTAPSAAAKVSPKALVMGQVKILKRGEMLTPDRGV--GGVD- 120

Query: 121 CGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSS 180
           CGKRRLE K +++DL LGSTDRLGPD DLMQKQVV ++ K  DG+YAGSGAFFASPPPSS
Sbjct: 121 CGKRRLELKADDMDLGLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSS 180

Query: 181 VPLPSFAVKNGIATTDLRRLLRLDLE 204
           VPLPSF   NG AT+DLRRLLRLDL+
Sbjct: 181 VPLPSFLGNNGTATSDLRRLLRLDLD 203

[Close]

BLAST of CsGy2G002370.1 vs. NCBI nr
Match: XP_022937911.1 (uncharacterized protein LOC111444161 [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 123/204 (60.29%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 3   TVILPPQDCLGKGLRHQGLVLSA-PLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
           TVIL PQDCLG GLRHQGLVLS+ PL SRRN      XXXX                   
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSXXXXANPNFNQDDATCSGRRRSS 63

Query: 63  XXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSCG 122
                             E+ST AK++ ++LVMGQVKILKRGE+L PD GVG G     G
Sbjct: 64  EVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG-----G 123

Query: 123 KRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSVP 182
           KR LESK E++DLVLGSTDRLGPD DLMQKQVV ++ K  DG+YAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFAVKNGIATTDLRRLLRLDLE 204
           LPSF  KNG AT DLRRLLRLDL+
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of CsGy2G002370.1 vs. NCBI nr
Match: XP_022965945.1 (uncharacterized protein LOC111465671 [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 123/204 (60.29%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 3   TVILPPQDCLGKGLRHQGLVLSA-PLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
           TVIL PQDCLG GLRHQGLVLS+ PL SRRN      XXXX                   
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSXXXXANPNFNQDDATCSGRRRSS 63

Query: 63  XXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSCG 122
                             E+ST AK++ ++LVMGQVKILKRGE+L PD GVG G     G
Sbjct: 64  EVGVKANRRVNRGRSRVIETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG-----G 123

Query: 123 KRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSVP 182
           KR LESK E++DLVLGSTDRLGPD DLMQKQVV ++ K  DG+YAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFAVKNGIATTDLRRLLRLDLE 204
           LPSF  KNG AT DLRRLLRLDL+
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDLD 202

[Close]

BLAST of CsGy2G002370.1 vs. TAIR10
Match: AT4G32020.1 (unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 50/128 (39.06%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 83  TTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSCGKRRLESKGEEVDLV-----LG 142
           T  K  + ++ + QV+ILKRGE                     E   E  DLV     LG
Sbjct: 77  TLKKSLSNTVAVSQVRILKRGE---------------------EIPKETSDLVVEMSDLG 136

Query: 143 STDRLGPDADLMQKQVVLTDFKD---GMYAGSGAFFASPPPSSVPLPSFAVKNGIATTDL 202
           ST R+GPD  L+  Q+ L+  K      YAG      SPPPS VPLP+F  K   AT DL
Sbjct: 137 STRRIGPDPGLIPGQIRLSGRKSKSAPFYAGP-VTMTSPPPSDVPLPAFFTKK--ATNDL 180

[Close]

BLAST of CsGy2G002370.1 vs. TAIR10
Match: AT4G02040.1 (unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 80  ESSTTAK--MATRSLVMGQVKILKRGEILTP--DRGVGAGGDDSCGKRRLESKGEEVDLV 139
           +S T  K   A  +LVM QVKILKRGE L+           DD+  +R +    ++VDL+
Sbjct: 41  QSPTVVKSPAANPNLVMEQVKILKRGETLSAFNKNKENISSDDT--RRPVLKMIKDVDLI 100

Query: 140 LGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPLPSF-AVKNGI 190
           + +T+R+GP+ +++ KQ+     +   +AG+     SPPPS VP+P F   KN +
Sbjct: 101 VSATNRIGPEPEILMKQIGALGLQS--FAGANCSL-SPPPSCVPIPCFLGTKNNL 150

[Close]

BLAST of CsGy2G002370.1 vs. TAIR10
Match: AT3G21570.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 160 DGMYAGSGAFFASPPPSSVPLPSFAVK-----------NGIATTDLRRLLRL 201
           D +YAGS  F  SP PSS+PLPSF+ K           +  A+ DLRRLLRL
Sbjct: 83  DDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQDLRRLLRL 134

[Close]

BLAST of CsGy2G002370.1 vs. TrEMBL
Match: tr|A0A0A0LG41|A0A0A0LG41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.4e-75
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CsGy2G002370.1 vs. TrEMBL
Match: tr|A0A1S3C5D8|A0A1S3C5D8_CUCME (uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 7.9e-63
Identity = 171/205 (83.41%), Postives = 174/205 (84.88%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MATVILPPQDCLGKGLRHQGLVLSAPL+SRRN XXXXXXXXXXXXXXXXXXXXX      
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSXXXXXXXXXXXXXXXXXXXXXGRRRRS 60

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPDRGV--GAGGDD 120
                   XXXXXXXXXXX  STTAKM T+SLVMGQVKILKRGEILTP RGV        
Sbjct: 61  ASVGLKANXXXXXXXXXXXXXSTTAKMTTKSLVMGQVKILKRGEILTPGRGVXXXXXXXX 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSV 180
            CGKRRLESK EEVDLVLGSTDRLGPD DLMQKQVVLT+FKDGMYAGSGAFFASPPPSSV
Sbjct: 121 XCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFKDGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFAVKNGIATTDLRRLLRLDLE 204
           PLPSF VKNGIATTDLRRLLRLDLE
Sbjct: 181 PLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of CsGy2G002370.1 vs. TrEMBL
Match: tr|M5VR81|M5VR81_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009094mg PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.1e-30
Identity = 115/207 (55.56%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M T IL  QDCL    RH+ L L+ P S  R       XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 102 MGTAILRSQDCLRGRFRHEALTLT-PRSGSRRSPNFSNXXXXXXXXXXXXXXXXXXXXXX 161

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           XX                 + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 162 XXPMGFQSNQHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 221

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 222 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 281

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 282 PSSVPLPAFLGRNGTATSDLRRLLRLD 304

[Close]

BLAST of CsGy2G002370.1 vs. TrEMBL
Match: tr|A0A251NJP0|A0A251NJP0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G253300 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.1e-30
Identity = 115/207 (55.56%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M T IL  QDCL    RH+ L L+ P S  R       XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MGTAILRSQDCLRGRFRHEALTLT-PRSGSRRSPNFSNXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           XX                 + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 61  XXPMGFQSNQHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 120

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 121 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 180

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 181 PSSVPLPAFLGRNGTATSDLRRLLRLD 203

[Close]

BLAST of CsGy2G002370.1 vs. TrEMBL
Match: tr|A0A2P6RID7|A0A2P6RID7_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086511 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 75/124 (60.48%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 85  AKMATRSLVMGQVKILKRGEILTP----DRGVGAGGDDSCGKRRLESKGEEVDLVLGSTD 144
           AK+  ++LVMGQVKIL+RGE L P     R VG GG D    R    +  + DLVLGSTD
Sbjct: 105 AKVPGKNLVMGQVKILRRGEALNPATEDKRVVGVGGRDDRKAREESVECSDSDLVLGSTD 164

Query: 145 RLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSVPLPSFAVKNGIATTDLRRLL 203
           RLGPD + +QKQ+ + +FK  D +YAGSGA++ASPPPSSVPLP+F  KNG AT+DLRRLL
Sbjct: 165 RLGPDPETVQKQIKVAEFKVMDAIYAGSGAYYASPPPSSVPLPAFLAKNGAATSDLRRLL 224

The following BLAST results are available for this feature:

BLAST of CsGy2G002370.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648719.1	3.6e-75	100.00	PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus] >KGN60738.1 hy...	[more]
XP_008456814.1	1.2e-62	83.41	PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]	[more]
XP_022143251.1	3.0e-50	62.14	uncharacterized protein LOC111013161 [Momordica charantia]	[more]
XP_022937911.1	2.6e-49	60.29	uncharacterized protein LOC111444161 [Cucurbita moschata]	[more]
XP_022965945.1	2.6e-49	60.29	uncharacterized protein LOC111465671 [Cucurbita maxima]	[more]

BLAST of CsGy2G002370.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32020.1	4.9e-10	39.06	unknown protein	[more]
AT4G02040.1	1.4e-09	36.52	unknown protein	[more]
AT3G21570.1	1.1e-04	50.00	unknown protein	[more]

BLAST of CsGy2G002370.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy2G002370.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LG41\|A0A0A0LG41_CUCSA	2.4e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1	[more]
tr\|A0A1S3C5D8\|A0A1S3C5D8_CUCME	7.9e-63	83.41	uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=...	[more]
tr\|M5VR81\|M5VR81_PRUPE	5.1e-30	55.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009094mg PE=4 SV=1	[more]
tr\|A0A251NJP0\|A0A251NJP0_PRUPE	5.1e-30	55.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G253300 PE=4 SV=1	[more]
tr\|A0A2P6RID7\|A0A2P6RID7_ROSCH	1.1e-29	60.48	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086511 PE=4...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy2G002370	CsGy2G002370	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002370.1.CDS.1	CsGy2G002370.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002370.1.exon.1	CsGy2G002370.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy2G002370.1	CsGy2G002370.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..89
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 1..202
None	No IPR available	PANTHER	PTHR33670:SF3	SUBFAMILY NOT NAMED	coord: 1..202