CsGy2G002320.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCAAGAGTACTTTATTTATTGATATTAAATTTGGTTAAGGGTTGTATGATACAACACATCAGACCTATAAATGGTGGGGTTGGGTTTATTTAATTCAATTACTCTTTCTTACACTATCTATTCAACTGTGGGGGGAAAAAATGGAAACTTTTTAGATTTTATGTTGTTTTGTTACATTACAATACAACCCCATTAAATTTTTCAATACACCGACTCCTCCAGAAGAAATTTTGTTAGCTAAAGTTTTTTTATTTTGTTGGTTTTTTCCATTCATTTCATTGGTTTCTTTCAGACTTTCACTGCTGCAATTAGATCTCAGTTCCTCACTTTCTCAGTAACGCGGAAAGGGAGAGGAAAATCACGACGAAAAAAGAAAGAAAAACAAGAATCAAAGAGGAAGATCAAGGTGAGAAATGTCACGCCGATCTGGGGCTTGCTTAAGGTGTTGTCTCGTGTTTTTTGCTGTAGTTTCTGCTTTGGCTGTTTGTGGACCAGCTTTGTATTGGAGATTCAAGAAGGCTTTGCAATTGGGAGATTCAAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTAATAATAATCGTTAATCTCTTCTGGGTTGCTTTGCATTTCTGTTTTTGTTGGCTTAGTTGTGAAATTTAGTGAAATTAACAGATACCCATTTGAAGAATTTGGTGTTTTGATCTGTTTTCATTCATGATTTTGATTCTTAGCTGTTTCTTTCTTTGTTTGTGTGTTGCTGTGGCTGGGGAAAAGTTGACCCATGTTAGATTTGGATTTGTACTTCTTTTGTTACCTTCTGTTGGGCTTAATGGAGCTAGATTAAGCCCTATGTCCGGTTAGATTATTGGTTTTTTTGTTGGGAAACTTTTCAAGAATTTATGATGTTCTTCACCGGTGCCTTTTGGAGTAACAACACTTGTCGATAGCTGGAATTTTACTACACTTTTTGCATGTTGTACTCCTTGAATTGATTTTTTGTTGATTCTTAACTGAAGTATATCATAAGTGGCATTCGATCTGAAATTATGAACTTGGATTTCTTTCTTATAATTTGCTTTGAGTTCATGTTTCTGTTTCCCTGGATTGGTAAATTTTCTCAAATCTGTACACTGTAATTTTCAAAGAAAATTCACTTGGTCTTCAATTATAGATTAATTAAAAGTTGTTGTCATTAAATGAAATGATAATACCACCATGACCAATCAATGGTTCTTTCTTTGTGGGTTTCTGTAAATATTGCTTTTAGGTCCTCTTCATATTTTACTATCACAATTAACTTCTTGAAGTATCAATTTGCTAGCTAATTTTGCTAGAAAAGAATTCTACATAACTCTATAGATCATGCTTACTGCCTATTCCTGCTTCATAACTGTTAAGTTAACAATGGTTGTGTGGCATTGCATCTTAAATGAATATTATTCTGAACCTAGTTTTATCTTTTTGGAAAAAGAAAAAGCTATTTTTATTATAAATTGCATCCTAGTAGCAATGGTTTCAGATATTTTGGGGTAAGTCCCCTTAAGGGTCTTGGGTTGAAGCCTCTAGGGGAAAGCTAATATCCTTGATGTCTCTTGGAACTGATGTTAGCGCATCAACATGTGTTGTGAAGTTTTTGTGTTAAAATTGATATACAGACTGCATATAAAATGGCTCCAACCTTATTTACCACATGCAGATTCTTTTATTAAATTTATGTTCTCTCTTAGAAATACTTTATTTGATTCCATGTAATTGTCAACTTGATTTTGTGTTCTTACCAGATTCGTTGTTGCTTCCTCACTAATACGTCTTTTTTTTTTCTTGATTATTCATTTTTAGGTCTGGCCAATCTCTCCGTTACAGGTTAGAATTTATCCCTCCAAATCAACTTGCAAATGAACTTAGCAGTCATTATGTGACAATCGTGATTCTTTACTTATTTTAGTACCATCAGAATGCTTGTTATGGTTTACTGAGCTAAATTTATCTTATTTCTGTTTTTATGGAGAAATATTACATTTTTCTTCCATTATCCATTTTCATGACATCTGATACTATTGAAGGTTAATTTTGTTCGTTTTAAATTCAACATTTTCTTGTTCTGCATTCTATGATGAATCAGAACTCCTGAAGAAATTGTGTCTTCTGCACTTCTTTAAAGGGATTTGCCAACCATTTTCTTATGGTTATTGATGTTCCTCGATTTAATGCTTGCACACTACTTGTTACTGTGGGCACCCATGATCACACGTCCAAAAATCTCTCTTCCAATATTTGTTGTGTCCAGAGAAGTCTCAACTCCCTTTTCCTGTCTTCTATCTTTATGATATGAACCGGACAATCTAAGGAGACCATTTATCTAGAATTTAACATCATTCAAGTTTCTTTGGAATTCAAATGTTCTAGAGTTGGGTCGGTTTCCTTTAAGATTAATCAAAATATACTTTAGCTGACACACGTTTATATATATAAAAGAGAAAGAAAAGGGCTGCAGTTTCTTCACTTCTCGGGTTGGAAACTTTTCAAGTAGAATCACATAGGCTTTTAGGTACTTCTTACTAGGAGTTTATCTTGTTGAATCTTGAAACTTATTTTGATATTTGTGTTATTTCCAAACTTGATTTCAGCTAGTTATTCAAAATCTGTGATATAACTTGCTTATTTGTTTCTTGATATTTTTTTTATGCACATGCTCACTTGTTTTTACAATACAGACTGTGGGAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAAGAATTGAAGCTTCAAGAAGCAGTTTCCGGCGAACACACTCGCCATATGAACATCACTTTGTTTGAGGCAAAAAGAGCTGCTTCTCAGTATCAGAGAGAGGCTGAAAAGTGCATTGCTGCCACAGAAACTTGTGAAGAAGCCCGAGAACGTGCCGAAGCATTGATGATCAAGGAGAGGAAGGTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGGGAATAAATCTATAATTTCAAAGGCAACCTCTTAGTTCAACTAGTCGTCAAGTTATTCAATCCACAAGATCAGTAGAAACTGGCAAGCGAAGTGCTTGGTTCTTCAGTCTGTCAAAGGCATAATGTTCTTCTCTTTTCCTCCATTGATTGTATTGCACCTTTTCTGGAAACATGTCAATTCTACATCATAATTCCTACATGACAATGTTATAGATCCCACTCTTCTGCATTTGCTAATATATAATATATATGATTATCGCCTCTTCAACCTTTTCTGGAAACATGTCAAT AAGCAAGAGTACTTTATTTATTGATATTAAATTTGGTTAAGGGTTGTATGATACAACACATCAGACCTATAAATGGTGGGGTTGGGTTTATTTAATTCAATTACTCTTTCTTACACTATCTATTCAACTGTGGGGGGAAAAAATGGAAACTTTTTAGATTTTATGTTGTTTTGTTACATTACAATACAACCCCATTAAATTTTTCAATACACCGACTCCTCCAGAAGAAATTTTGTTAGCTAAAGTTTTTTTATTTTGTTGGTTTTTTCCATTCATTTCATTGGTTTCTTTCAGACTTTCACTGCTGCAATTAGATCTCAGTTCCTCACTTTCTCAGTAACGCGGAAAGGGAGAGGAAAATCACGACGAAAAAAGAAAGAAAAACAAGAATCAAAGAGGAAGATCAAGGTGAGAAATGTCACGCCGATCTGGGGCTTGCTTAAGGTGTTGTCTCGTGTTTTTTGCTGTAGTTTCTGCTTTGGCTGTTTGTGGACCAGCTTTGTATTGGAGATTCAAGAAGGCTTTGCAATTGGGAGATTCAAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTCTGGCCAATCTCTCCGTTACAGACTGTGGGAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAAGAATTGAAGCTTCAAGAAGCAGTTTCCGGCGAACACACTCGCCATATGAACATCACTTTGTTTGAGGCAAAAAGAGCTGCTTCTCAGTATCAGAGAGAGGCTGAAAAGTGCATTGCTGCCACAGAAACTTGTGAAGAAGCCCGAGAACGTGCCGAAGCATTGATGATCAAGGAGAGGAAGGTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGGGAATAAATCTATAATTTCAAAGGCAACCTCTTAGTTCAACTAGTCGTCAAGTTATTCAATCCACAAGATCAGTAGAAACTGGCAAGCGAAGTGCTTGGTTCTTCAGTCTGTCAAAGGCATAATGTTCTTCTCTTTTCCTCCATTGATTGTATTGCACCTTTTCTGGAAACATGTCAATTCTACATCATAATTCCTACATGACAATGTTATAGATCCCACTCTTCTGCATTTGCTAATATATAATATATATGATTATCGCCTCTTCAACCTTTTCTGGAAACATGTCAAT ATGTCACGCCGATCTGGGGCTTGCTTAAGGTGTTGTCTCGTGTTTTTTGCTGTAGTTTCTGCTTTGGCTGTTTGTGGACCAGCTTTGTATTGGAGATTCAAGAAGGCTTTGCAATTGGGAGATTCAAAAGCCTCCTGTCCTCCTTGCATCTGCGATTGTCCACCCCCATTATCCCTTTTGAAGATTTCCCCTGGTCTGGCCAATCTCTCCGTTACAGACTGTGGGAGTAATGACCCAGATCTCAAGCAGGAGATGGAAAAACAATTTGTGGACCTTTTGACAGAAGAATTGAAGCTTCAAGAAGCAGTTTCCGGCGAACACACTCGCCATATGAACATCACTTTGTTTGAGGCAAAAAGAGCTGCTTCTCAGTATCAGAGAGAGGCTGAAAAGTGCATTGCTGCCACAGAAACTTGTGAAGAAGCCCGAGAACGTGCCGAAGCATTGATGATCAAGGAGAGGAAGGTTACATCATTGTGGGAGCGACGAGCCCGCCAAATGGGTTGGGAAGGGGAATAA MSRRSGACLRCCLVFFAVVSALAVCGPALYWRFKKALQLGDSKASCPPCICDCPPPLSLLKISPGLANLSVTDCGSNDPDLKQEMEKQFVDLLTEELKLQEAVSGEHTRHMNITLFEAKRAASQYQREAEKCIAATETCEEARERAEALMIKERKVTSLWERRARQMGWEGE
BLAST of CsGy2G002320.1 vs. NCBI nr
Match: XP_004139277.1 (PREDICTED: uncharacterized protein LOC101212944 [Cucumis sativus] >KGN60733.1 hypothetical protein Csa_2G008730 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 3.9e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. NCBI nr
Match: XP_008457359.1 (PREDICTED: uncharacterized protein LOC103497063 [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 8.7e-91 Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. NCBI nr
Match: XP_022143173.1 (uncharacterized protein LOC111013108 [Momordica charantia]) HSP 1 Score: 333.6 bits (854), Expect = 4.1e-88 Identity = 166/172 (96.51%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. NCBI nr
Match: XP_022938183.1 (uncharacterized protein LOC111444344 [Cucurbita moschata] >XP_023537618.1 uncharacterized protein LOC111798603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 321.2 bits (822), Expect = 2.1e-84 Identity = 158/171 (92.40%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. NCBI nr
Match: XP_023547119.1 (uncharacterized protein LOC111806024 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319.7 bits (818), Expect = 6.1e-84 Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 271.9 bits (694), Expect = 2.6e-73 Identity = 136/174 (78.16%), Postives = 155/174 (89.08%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 255.0 bits (650), Expect = 3.3e-68 Identity = 127/175 (72.57%), Postives = 152/175 (86.86%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28 Identity = 71/171 (41.52%), Postives = 104/171 (60.82%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25 Identity = 68/164 (41.46%), Postives = 92/164 (56.10%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 102.1 bits (253), Expect = 3.6e-22 Identity = 63/166 (37.95%), Postives = 86/166 (51.81%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TrEMBL
Match: tr|A0A0A0LG38|A0A0A0LG38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008730 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.6e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TrEMBL
Match: tr|A0A1S3C6L6|A0A1S3C6L6_CUCME (uncharacterized protein LOC103497063 OS=Cucumis melo OX=3656 GN=LOC103497063 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 5.8e-91 Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TrEMBL
Match: tr|A0A1R3KXD9|A0A1R3KXD9_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00298 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 2.1e-80 Identity = 152/172 (88.37%), Postives = 160/172 (93.02%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TrEMBL
Match: tr|A0A2H5PWQ0|A0A2H5PWQ0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_174330 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79 Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of CsGy2G002320.1 vs. TrEMBL
Match: tr|A0A061GJK9|A0A061GJK9_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037096 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79 Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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