CsGy2G002300.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G002300.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	temperature-induced lipocalin-1-like
Location	Chr2 : 1507735 .. 1510246 (-)
Sequence length	2243

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCACTTACCTTGTTTGGCAAGCAAGAAAAGAAAAGCAAAATTTCTCTCAACTAGGCCTCTGCTGATTTCTAGACCACAGAAAACCCTCTTCCCCACAACCATAATATCTCTCCACGTCTCCCCTTTTCCCAAATCCACATATTCTTCTTCAATAAACCCAAAATTTTCAAATCAAATCACCACCGACTCCCTCTGAGATCAATCGTCTCAGAAGCTCATCATACAACAATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGGTATGACATTGATTTTCTTCTTTGGCAGTTCGTTTTACTACTGGGTGATTGGTGAGATCAGAAAAGTGATGTCAATTCCCGTTTAGTTAGCAATTGATTTTCTATGGGTATGACATTGATTTTCTTTCGAGGAGTTTTTGGATGCTTGTGAACTGTTACAGGTTTGATGTTGTGGGTGGGAGATTTGAACCTTTAAACAACCAAAGGGGTGTTGAGTTATGATAAGTGGGAGATTCTGAATTGTGATTTCATGGTGTTTCTTTTGACAGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATCAAGGTTTGAAGAAGAGTTAAATTGAATTTTGTACCATTGAGTTCAATGGTTTTGGTAAATTTCCCCACTTTGGTTTGTATCCAGTGAAGATTTTGTGCTTGGTTTTGTCGAATGGTTGAAACGAATCCTTTGTGCTGTTCGTATAGAGTCTTCCAGATATTGTATTAGCTGAATAATTTAGGATAAAGCTGGGTTGTGAGCTCTCCACATTTTCCTTTTAGACTGCCTGATTCTGAAGTTTCATAATACTGTAAAAATGAAATTTGAGGAGAGATGCAATTTATTTACTCAAAGTTTAACCTGTGGCTGAGCCTTTCTGTGCAAAACAAAACTATAACACTTTTCAGTTCGCATATCTTGGCAATGCTGAAGAGAGAGAGTAAAGCTTTTCCTAAAAGTATAGGAGTTTTGTTTTTTCCTATTTCTTGGAACATCTAAAAGTATCTTTATTTTGAAGGGGACTCATTTTTAAATTCCTTCTCTCTCCTAAAAGCTACTTCAAATCTGCATAAATATTCTAAGTCTCATTCCTGTGAAAGGGTCCCACTCAAGAACCTTGTTCAAATAGAGAAGCAAAGAAGAGATGCAAAATGGTTGAGAGATGAGAAGGTATATGAAGAGTCTCCAGTTTGGGTGCTCTTTAGTTTGGCAAACAATGTGAGAGCTTCATACAAGAACTGGCAAAAGCAACCCACGAATTAACATGTAGATCCATCTTTCTCGGCCTTATGACTAAGATCAGGTTTAGAATACGTCCTTATCAGTGTAATAGCACGTTGGTAAATGTTCTGAGTTCAGCATGGCTATGAATCCATGGCCTCAGGTTTTAAGCACATACAAAATAGAAGAAGTTCAATCAACTGTGATATTTGCAGAAAAGCCAAATGCGGTGTTGAAGGAAAAGGTGTTTTTGAACACAGTTTAAAAGACACTTTTTTTTAAGAAATAATAATAATAATGACTCTAAAGAAGAGACAGTAATGGACCGTTTCATCTTTAAATAATGTTGCAAATAATGTTGGGATTTTCAAAAAGCACTTTTGGTCATGCAACAGATTCAAAATTAGGACTTGGCGAGGACCAAGTCCATCCTTCCATTCTGAAAGCCCTTTACTTCTTTTGAGCTTTTTCTATAAGCATGACCATCCATAGTTATTTCACTTCAACTGAAATTCATGTTCGAGTTATACTAGAACAATTCCAAAAATGGGATTCAGATTAATTTATTAAGATGACTTGATTCAAAAGGCAGTTCCTACTCAATTGATAGAATATTTATATGTCAAAATCATTGCATTCAGAGGGACCCAAATCATGAACTAGATCTTTTAAATTTACATAGTGAGTGAATGATTTCAAGTCACTTTCATGTTCGATAAGTGTAAACATCCCTTCTCTAACAATAAGAATCAAATCACTAGGAAACTAATGGCTGACAAAAAAAAAAAAAAGA

mRNA sequence

CCCCACTTACCTTGTTTGGCAAGCAAGAAAAGAAAAGCAAAATTTCTCTCAACTAGGCCTCTGCTGATTTCTAGACCACAGAAAACCCTCTTCCCCACAACCATAATATCTCTCCACGTCTCCCCTTTTCCCAAATCCACATATTCTTCTTCAATAAACCCAAAATTTTCAAATCAAATCACCACCGACTCCCTCTGAGATCAATCGTCTCAGAAGCTCATCATACAACAATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATCAAGGTTTGAAGAAGAGTTAAATTGAATTTTGTACCATTGAGTTCAATGGTTTTGGTAAATTTCCCCACTTTGGTTTGTATCCAGTGAAGATTTTGTGCTTGGTTTTGTCGAATGGTTGAAACGAATCCTTTGTGCTGTTCGTATAGAGTCTTCCAGATATTGTATTAGCTGAATAATTTAGGATAAAGCTGGGTTGTGAGCTCTCCACATTTTCCTTTTAGACTGCCTGATTCTGAAGTTTCATAATACTGTAAAAATGAAATTTGAGGAGAGATGCAATTTATTTACTCAAAGTTTAACCTGTGGCTGAGCCTTTCTGTGCAAAACAAAACTATAACACTTTTCAGTTCGCATATCTTGGCAATGCTGAAGAGAGAGAGTAAAGCTTTTCCTAAAAGTATAGGAGTTTTGTTTTTTCCTATTTCTTGGAACATCTAAAAGTATCTTTATTTTGAAGGGGACTCATTTTTAAATTCCTTCTCTCTCCTAAAAGCTACTTCAAATCTGCATAAATATTCTAAGTCTCATTCCTGTGAAAGGGTCCCACTCAAGAACCTTGTTCAAATAGAGAAGCAAAGAAGAGATGCAAAATGGTTGAGAGATGAGAAGGTATATGAAGAGTCTCCAGTTTGGGTGCTCTTTAGTTTGGCAAACAATGTGAGAGCTTCATACAAGAACTGGCAAAAGCAACCCACGAATTAACATGTAGATCCATCTTTCTCGGCCTTATGACTAAGATCAGGTTTAGAATACGTCCTTATCAGTGTAATAGCACGTTGGTAAATGTTCTGAGTTCAGCATGGCTATGAATCCATGGCCTCAGGTTTTAAGCACATACAAAATAGAAGAAGTTCAATCAACTGTGATATTTGCAGAAAAGCCAAATGCGGTGTTGAAGGAAAAGGTGTTTTTGAACACAGTTTAAAAGACACTTTTTTTTAAGAAATAATAATAATAATGACTCTAAAGAAGAGACAGTAATGGACCGTTTCATCTTTAAATAATGTTGCAAATAATGTTGGGATTTTCAAAAAGCACTTTTGGTCATGCAACAGATTCAAAATTAGGACTTGGCGAGGACCAAGTCCATCCTTCCATTCTGAAAGCCCTTTACTTCTTTTGAGCTTTTTCTATAAGCATGACCATCCATAGTTATTTCACTTCAACTGAAATTCATGTTCGAGTTATACTAGAACAATTCCAAAAATGGGATTCAGATTAATTTATTAAGATGACTTGATTCAAAAGGCAGTTCCTACTCAATTGATAGAATATTTATATGTCAAAATCATTGCATTCAGAGGGACCCAAATCATGAACTAGATCTTTTAAATTTACATAGTGAGTGAATGATTTCAAGTCACTTTCATGTTCGATAAGTGTAAACATCCCTTCTCTAACAATAAGAATCAAATCACTAGGAAACTAATGGCTGACAAAAAAAAAAAAAAGA

Coding sequence (CDS)

ATGGTGAAGACAGAGATGGATGTTATGAAGGATGTTGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCTTCTAGGTTTCAGCCGAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAAAGGACGGTGAATGTTCTAAATGAGACATGGGTTGATGGTAAGAGGGGTTTCATTGAAGGCACTGCTGTTAAAGCTAATCCTGACAGTGATGAAGCCAAGCTTAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATTATTCCTGTTGTTGGTGATTACTGGGTTTTGTATCTTGATCATGATTATCATCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAATTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGTAGGACAACACATACTGATCCTCCACCAGAAGGAGATGAAGGCCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGA

Protein sequence

MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSIFGK

Homology

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BLAST of CsGy2G002300.1 vs. NCBI nr
Match: XP_004139285.1 (PREDICTED: apolipoprotein D-like [Cucumis sativus] >KGN60731.1 Apolipoprotein d [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 5.5e-107
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of CsGy2G002300.1 vs. NCBI nr
Match: XP_008457325.1 (PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 7.4e-104
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EMDVMK VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of CsGy2G002300.1 vs. NCBI nr
Match: XP_022999303.1 (temperature-induced lipocalin-1-like [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 7.2e-99
Identity = 170/185 (91.89%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+R FIEGTA KANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAFKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LV+KAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEEIYNELVKKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

[Close]

BLAST of CsGy2G002300.1 vs. NCBI nr
Match: XP_023545355.1 (temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-98
Identity = 169/185 (91.35%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M   EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNG NTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MANKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGVNTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEEIYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           S+FGK
Sbjct: 181 SMFGK 184

[Close]

BLAST of CsGy2G002300.1 vs. NCBI nr
Match: XP_022946158.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 2.1e-98
Identity = 170/185 (91.89%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EM+VMKDVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+R FIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLD DYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDRDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

[Close]

BLAST of CsGy2G002300.1 vs. TAIR10
Match: AT5G58070.1 (temperature-induced lipocalin)

HSP 1 Score: 289.7 bits (740), Expect = 1.3e-78
Identity = 129/183 (70.49%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RGFIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNXAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

[Close]

BLAST of CsGy2G002300.1 vs. Swiss-Prot
Match: sp|Q9FGT8|TIL_ARATH (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-77
Identity = 129/183 (70.49%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RGFIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNXAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

[Close]

BLAST of CsGy2G002300.1 vs. Swiss-Prot
Match: sp|Q46036|BLC_CITFR (Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  R   +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGY-NPDREMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            T  KA    D   A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  KTEGKAYFTGDPSTAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSKL 155
           L R   + +E+  Q++  A  +G++V+KL
Sbjct: 150 LSRTPTISDEMKQQMLAIATREGFEVNKL 169

[Close]

BLAST of CsGy2G002300.1 vs. Swiss-Prot
Match: sp|P0A902|BLC_ECO57 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  RG  +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGY-NPDRGMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            +  KA        A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  QSEGKAYFTGAPTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]

BLAST of CsGy2G002300.1 vs. Swiss-Prot
Match: sp|P0A901|BLC_ECOLI (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 8   VMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRGFIE 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  RG  +
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGY-NPDRGMWQ 89

Query: 68  GTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            +  KA        A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  QSEGKAYFTGAPTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]

BLAST of CsGy2G002300.1 vs. Swiss-Prot
Match: sp|Q5URA7|YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.8e-16
Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K ++     +D++RYMG WYEIA  P+ FQ K   N+ A Y L +   + V N   ++G+
Sbjct: 19  KRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGR 78

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVG--DYWVLYLDHDYHHALIGQPSR 122
              + GTA+ A       ++   F  P  + +    G   Y V+++D +Y +A++     
Sbjct: 79  INSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGGN 138

Query: 123 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRR 157
           + LWIL R  ++++  YNQLV     QGYDV+ L R
Sbjct: 139 DTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168

[Close]

BLAST of CsGy2G002300.1 vs. TrEMBL
Match: tr|A0A0A0LL45|A0A0A0LL45_CUCSA (Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.6e-107
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of CsGy2G002300.1 vs. TrEMBL
Match: tr|A0A1S3C5X6|A0A1S3C5X6_CUCME (temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.9e-104
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EMDVMK VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRGFIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of CsGy2G002300.1 vs. TrEMBL
Match: tr|B9SBY6|B9SBY6_RICCO (Apolipoprotein d, putative OS=Ricinus communis OX=3988 GN=RCOM_0700620 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.8e-88
Identity = 151/183 (82.51%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 3   KTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K EM+V+K +D+KRYMGRWYEIASFPSRFQPKNG NTRATYTL ++ TV+VLNETW DGK
Sbjct: 5   KNEMEVVKGLDIKRYMGRWYEIASFPSRFQPKNGVNTRATYTLNEDGTVHVLNETWSDGK 64

Query: 63  RGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           RG+IEGTA KANP SDEAKLKVKFYVPPF+PIIPVVGDYWVLYLD DY +ALIGQPSRNY
Sbjct: 65  RGYIEGTAYKANPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYSYALIGQPSRNY 124

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWILCR+ HLD+EIYNQLVEKAKE+GYDVSKL +T  +DPPPEG+EGPKDTKGIWWIKSI
Sbjct: 125 LWILCRRTHLDDEIYNQLVEKAKEEGYDVSKLHKTQQSDPPPEGEEGPKDTKGIWWIKSI 184

Query: 183 FGK 186
            G+
Sbjct: 185 LGR 187

[Close]

BLAST of CsGy2G002300.1 vs. TrEMBL
Match: tr|A0A2N9FQS8|A0A2N9FQS8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20959 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86
Identity = 148/185 (80.00%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M   EM+V+K V+L+RYMGRWYEIASFPSRFQPKNG NTRATYTLR++ TVNVLNETW D
Sbjct: 1   MANKEMEVVKGVNLERYMGRWYEIASFPSRFQPKNGMNTRATYTLREDGTVNVLNETWND 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKRG+IEG+A KA+P+SDEAKLKVKFYVPPF+PIIPVVGDYWVLYLD DYHHALIGQP+R
Sbjct: 61  GKRGYIEGSAYKADPNSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDDDYHHALIGQPTR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
            YLWILCR+ HLD+EIYNQLV++A++QGYDVSKL++T  +D PPEGDEGPKDTKGIWW K
Sbjct: 121 KYLWILCREPHLDDEIYNQLVQRARDQGYDVSKLQKTPQSDSPPEGDEGPKDTKGIWWFK 180

Query: 181 SIFGK 186
           SI GK
Sbjct: 181 SILGK 185

[Close]

BLAST of CsGy2G002300.1 vs. TrEMBL
Match: tr|A0A2R6R4V6|A0A2R6R4V6_ACTCH (Temperature-induced lipocalin-1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10065 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.5e-86
Identity = 147/185 (79.46%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M K EM+V+K +DL+RYMGRWYEIASFPSRFQPK+G NTRATYTLR++  VNVLNETW D
Sbjct: 1   MAKKEMEVVKGLDLERYMGRWYEIASFPSRFQPKSGINTRATYTLREDGIVNVLNETWTD 60

Query: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
            KRGFIEGTA KA+P SDEAKLKVKFYVPPF+PIIPVVGDYWVL++D DY +ALIGQPSR
Sbjct: 61  DKRGFIEGTAYKADPKSDEAKLKVKFYVPPFLPIIPVVGDYWVLFIDDDYQYALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
            YLWILCRQNH+ EE Y QLV++AK++GYDVSKL +TTHTDPPPEG++GPKDTKGIWW K
Sbjct: 121 KYLWILCRQNHIAEETYKQLVQRAKDEGYDVSKLHQTTHTDPPPEGEDGPKDTKGIWWFK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

The following BLAST results are available for this feature:

BLAST of CsGy2G002300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139285.1	5.5e-107	100.00	PREDICTED: apolipoprotein D-like [Cucumis sativus] >KGN60731.1 Apolipoprotein d ...	[more]
XP_008457325.1	7.4e-104	96.76	PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 P...	[more]
XP_022999303.1	7.2e-99	91.89	temperature-induced lipocalin-1-like [Cucurbita maxima]	[more]
XP_023545355.1	1.6e-98	91.35	temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946158.1	2.1e-98	91.89	temperature-induced lipocalin-1-like [Cucurbita moschata]	[more]

BLAST of CsGy2G002300.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58070.1	1.3e-78	70.49	temperature-induced lipocalin	[more]

BLAST of CsGy2G002300.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGT8\|TIL_ARATH	2.4e-77	70.49	Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1	[more]
sp\|Q46036\|BLC_CITFR	1.3e-19	38.93	Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1	[more]
sp\|P0A902\|BLC_ECO57	2.9e-19	38.51	Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 ...	[more]
sp\|P0A901\|BLC_ECOLI	2.9e-19	38.51	Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc ...	[more]
sp\|Q5URA7\|YR877_MIMIV	6.8e-16	32.69	Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R8...	[more]

BLAST of CsGy2G002300.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LL45\|A0A0A0LL45_CUCSA	3.6e-107	100.00	Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1	[more]
tr\|A0A1S3C5X6\|A0A1S3C5X6_CUCME	4.9e-104	96.76	temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=...	[more]
tr\|B9SBY6\|B9SBY6_RICCO	3.8e-88	82.51	Apolipoprotein d, putative OS=Ricinus communis OX=3988 GN=RCOM_0700620 PE=3 SV=1	[more]
tr\|A0A2N9FQS8\|A0A2N9FQS8_FAGSY	1.2e-86	80.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20959 PE=3 SV=1	[more]
tr\|A0A2R6R4V6\|A0A2R6R4V6_ACTCH	3.5e-86	79.46	Temperature-induced lipocalin-1 like OS=Actinidia chinensis var. chinensis OX=15...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **INTERPRO**
Term	Definition
IPR022272	Lipocalin_CS
IPR000566	Lipocln_cytosolic_FA-bd_dom
IPR012674	Calycin
IPR022271	Lipocalin_ApoD
IPR002446	Lipocalin_bac

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005215	transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy2G002300	CsGy2G002300	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy2G002300.1	CsGy2G002300.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002300.1.five_prime_UTR.1	CsGy2G002300.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002300.1.exon.2	CsGy2G002300.1.exon.2	exon
CsGy2G002300.1.exon.1	CsGy2G002300.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002300.1.CDS.2	CsGy2G002300.1.CDS.2	CDS
CsGy2G002300.1.CDS.1	CsGy2G002300.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy2G002300.1.three_prime_UTR.1	CsGy2G002300.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002446	Lipocalin, bacterial	PRINTS	PR01171	BCTLIPOCALIN	coord: 148..158 score: 38.66 coord: 121..132 score: 48.99 coord: 106..114 score: 54.09 coord: 12..26 score: 60.55
IPR022271	Lipocalin, ApoD type	PIRSF	PIRSF036893	Lipocalin_ApoD	coord: 1..170 e-value: 3.6E-51 score: 171.3
IPR012674	Calycin	GENE3D	G3DSA:2.40.128.20		coord: 1..163 e-value: 5.4E-49 score: 168.2
IPR012674	Calycin	SUPERFAMILY	SSF50814	Lipocalins	coord: 5..163
IPR000566	Lipocalin/cytosolic fatty-acid binding domain	PFAM	PF08212	Lipocalin_2	coord: 12..158 e-value: 3.1E-53 score: 179.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..173
None	No IPR available	PANTHER	PTHR10612	APOLIPOPROTEIN D	coord: 1..185
None	No IPR available	PANTHER	PTHR10612:SF32	SUBFAMILY NOT NAMED	coord: 1..185
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 11..24