CsGy1G031540.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G031540.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Location	Chr1 : 30488775 .. 30493956 (-)
Sequence length	3921

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGCCATCAACCCTTCTCTTCCATTTCCTCCTTACCAAACTTTCCCCAATTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCACATTCTCAATCTCAACATCCTCCTCTCGACTTGTCTTCGTCCTTTTCCTCCCTCAATAATCTCATCCATTTCGCCAACCAAACCCTTCAATCTCTCTCCTACCTCACCCCATCTGATTTCGCGAACCATTCTCATCTCCTTCACTGCCATTTTGATCGTCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGCCACTCCCTTCTCTGCCCTTCTGCTTCCCTGCCTCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCATTCATCTCGTCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATTCTGATGCCACTTCCAATTTCTTCTATGTTGATTGCCCTGGCGTCGTTGCCTTGTCTAACCTTGATGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCTGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTCGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCATCTGACTTGTGGAATCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAGTAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGGCTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATCGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATTTATAAGGAAGCTTTGGGGTTTCAAGTTGCGTTGGAAAAAGGTAATGGAATGGAGGGTGAATCAGGGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTGGCATCGCAGCTTTCCGTGCTGTACGGGGAAACAAACGGGAACTTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATCGGGGTTGTTGCTTTTACAGTCCGAACAAAAATCTACGGAGAGTCTGACTTTAGGAGAGGGTTCTCATGATCTGGAAATTAGTTGTAGTGACACACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCCATGCGGTCAATTGTAGTGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCGTTACGCTTTGCTCATCTGCAAACTAAATATCAGCGGTATGTTACTTCTACAATTACTAGTTCTGTTTTTCGTGTAGGTACTAGTTTTGATCAAGTTGATGTTTTCCTTACTGTTATGATTGTGATATCATGTGTACAACAAATTTATGCTTGTTGTCTATTTTGGGAAGAAAAATAGTTGTTAGAAGACTTTAAAGGTAATGGGTCTACATCCATTGTGGTCTCCTACCTAGGATAGTAAAATTTTGGCAAGGGTTCATGTGAAATGCATGGAAGTGTTGACTTTCTTAGATATTATGTGAAAAAAATGACCAAAGGTGGGTCCCTTCGAGGACATACGGTATAATTGGAATGATGCAGAGAAGATTAGCATGGTCCCTATCACCCTGTGCAAGGATGACATGCACAAAAAAAGATGACCAAAAGAATTCTTGAGTCTCTGTCTTTGGGGCATAATACAGATAAAGAAAACTACAGAGGAGGAAAGTGAGGCAGCCTCTTGATTTTATTGATTGTAATTTCTTAGGGTTAAAACGAAACCTTTTCTATATAAAAAAAAAAGTAAACAAAACTATAGATTGAGGCATTGAATCTAACTTCAATCAAATTAATAAAGATTAGAGTAGTTTACCTGAATTTGTAGAGTCTCAGTTATTTACCCCATGCCTTTGATTTTATCAAAAGGATTTCTGTAAAAAGAAATGAGGATCTCACTTTTCAGGTAGGCAATTTTTGGAATCAGACTAATCCATTCTTAACTATTTTAGGGTTTCGGAGTATAATGATATCTTTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATAATGAGGTATTTCTGAACTCTTTACTGTTCTGGTTATTAATCATGCAGTTTTTAATTTTTTCTGCCTGTCTAGTTTTTCTGTTCATCTATTGATGATTTTAAATCTCATGAATTCTTCCTATTGACTGCTCTGAATTGGGATACCATGGGAATAGAACATAAAAATTTGTAGATTCTCTAATTCCAACGGAGCTTATGAGATGGCTGTTTTGTCATTCTTATCTTGCATTTTGTTCACCTCCTTAGTCCTTCCATATTATTTTATATAAAAAAGAATAAACCTCCTGTGGCAATAAATGATGAAGCAGCAGCAGCTGGCAGATTGCTTAATGTTCAGTGGCCCATGATGTTTCCTGTCTGTTTGTTTATAAAAAGCAGGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAGAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAAGCAAAGCGATCAACTTTACAGGTAACATCTTGTTAGAGTTATCTCTTGTAGGATGATTCTTATTTGCTATGATGAAGTTTTGCCTATATTGATGAAAAGGGATGATTCTTATTCATATACTTCAACCTTGCTTTTGTTATCTCTCTATTCTGTAATAGTTATGGGCATAGGGTCTAACTGTGGCATGCCAATTCCTTTTCTTATGATCTTTTATGGAAAAATATGAGATTATATATGTTTTCTAGCTTCTGCTTCAACTTTTGCCACCAGAAGTTTCTATGTTAGGTGATATCCTCACTCAAGTTTTTGCTAATTTTACTTTCCGTGGAAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGACGCTTTGTGAAAGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCACAACCTTACAAAAAATATTACTGCTGACGTGCACACAAGAGGAAGCAACGACTCATATGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTAATTATGATAGTAGATACTTGGCTTCTGAGAAGCCACAAAAAAGTCATTATGGGCACTATGTCTCTCCGGAAGATGAAAGGAAAATTTCCAGTAAGGACAAATATGATCGAGATCACTATCATAGGTTCTTAGATCAAAGCAGTGGTCCTAGCCAGTCACACAAATGGAAGAGATATCCTAATGATCGAGATGATGAGGTGACAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGACTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGGGTGGTTCAAGTGCAAGGAAAGTTAGCAATAAGTTGAGAGCCAGTGATAGTTGGAAGATGAACACGGCTGATAATCATAGTTCAGAGCATTTGGTGTTTAATTCATTTAATGATAGGTATACCCCATCTGATTGTCATGATGAATTGGAAGATGAGTACTCCACTGTCAGCAGATTATCTAAGTCCAGATGAACTTTAATTTTATGATCATTGAATGATGGGAAGGTGTGCTGCATGCCGTGCCATACTTCTTAACCTAACAAATCTCTACCTTGTGGTAAGTTTTTCTTTTATGCTACATCCCAAGAATCTTTAGCTGTGCGTTCTTCTATTACGGTTTTTCTTTAACATTTTTGTTTCACACAACCTTGCAGCATGAAGTTTTATCTGGCTTGAGAAATTTTATCCTCACCTGTATCCTCCATAGTATCCTTGAAGTTTATATCCCATTTTCTTATACATTGAATCTGTCTCAATCTCTACTCTTTCATTTATGTTTCTGAGAGATTTGCTACTAACTTAATGTTGCACTTGCATTTATTTGATTTACATCATCATCGTATAAAAGATACCAATTTTACATCCACTTTTTCTGTTCTGGGGTTGTCTTATAATTCTCGATTAATTACGAAGACAGATTAATGAAGTCGTCAGAAAAATGATTCATAAATAACATTTTATGGAGGGTGCAACCAACTGTTAGTTATGGTTATGAAATTACCATGTTATACGGTTGTTTCTTTTTGTACTCCTTGTTTGCTATGGTTTACACATTTTGGTGTTGCATCACTTGACCTTTACCTCTGCTTTTCGGTTGCAATTGGAGTTGGTCATTCAAAATCTTGTGGAAAATTAAAAAAATGATATACTCAGAAAAAAGATCGTAGAGTTTAGGCATTATAAACTGGTTAGTGAGGCAATATCATTGAATAAGCCAAACTTGTTTCCGGTCTCTTCCTAGTGAGATGAAAAGTAGTATAAGCTTTGGAGGGCTTATTGATGCATAATGATTTCACTTCAAAAACTTACTCATGTTCGTTATGGAGTGGTATGAAAGATTAATCTAGCAACTTAACAAACATTTTAGGCAATTACACTCAGTACTAGAACTCAACCTTATTACTGATATTCTATTAGTTCTAACTTTTGTATTGCATTTAGTGTTTTGATCAACAGCCCAGTTTATCAGTAAAGTATTGAAGGCAGTCTGGTGATGAATTTGATCAGAGACCTACAACCCACAGCGTTTCAGATCGTCTGTTGCAGGTTGCTTCATTCTACATTTATGCTCACATCGTCTGTTGCAGGTTGCTTCATCCTACATTTATGCTCACAGGAATTTCAGCACAAACAAAATTATCGTACTGATCAGCATTTGTTATTTTGTTGTTCCTATGGAAAATTATTAAAATATGGGCATGTGGTAATTCAATGACATAAACATATGCTGCAACCTTACTAAAAAATTGTTTTTTGAAGAGTTTATCTTTAAGATCTTGGAGTTTTGCTCGAAAAACTCGAGCAGTGAGATATGGTCTATCTTGTGGTCGTTGTCCCAGTAAAAGCTCATCTTGAATTTCTATCCAATATGAATTGCACGTCATTGTAATAAAAAGATCAGGTTTTCTAAATCGTTGTACAAAGGCCATTGCATCTAAGTATCGTTGTCGCATATCTCTTGGACCACCAACAAAAGTGCTAG

mRNA sequence

ATGAGAGCCATCAACCCTTCTCTTCCATTTCCTCCTTACCAAACTTTCCCCAATTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCACATTCTCAATCTCAACATCCTCCTCTCGACTTGTCTTCGTCCTTTTCCTCCCTCAATAATCTCATCCATTTCGCCAACCAAACCCTTCAATCTCTCTCCTACCTCACCCCATCTGATTTCGCGAACCATTCTCATCTCCTTCACTGCCATTTTGATCGTCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGCCACTCCCTTCTCTGCCCTTCTGCTTCCCTGCCTCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCATTCATCTCGTCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATTCTGATGCCACTTCCAATTTCTTCTATGTTGATTGCCCTGGCGTCGTTGCCTTGTCTAACCTTGATGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCTGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTCGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCATCTGACTTGTGGAATCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAGTAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGGCTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATCGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATTTATAAGGAAGCTTTGGGGTTTCAAGTTGCGTTGGAAAAAGGTAATGGAATGGAGGGTGAATCAGGGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTGGCATCGCAGCTTTCCGTGCTGTACGGGGAAACAAACGGGAACTTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATCGGGGTTGTTGCTTTTACAGTCCGAACAAAAATCTACGGAGAGTCTGACTTTAGGAGAGGGTTCTCATGATCTGGAAATTAGTTGTAGTGACACACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCCATGCGGTCAATTGTAGTGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCGTTACGCTTTGCTCATCTGCAAACTAAATATCAGCGGGTTTCGGAGTATAATGATATCTTTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATAATGAGTTTTTCTGTTCATCTATTGATGATTTTAAATCTCATGAATTCTTCCTATTGACTGCTCTGAATTGGGATACCATGGGAATAGAACATAAAAATTTATTCTCTAATTCCAACGGAGCTTATGAGATGGCTGTTTTGTCATTCTTATCTTGCATTTTGTTCACCTCCTTAAATAAACCTCCTGTGGCAATAAATGATGAAGCAGCAGCAGCTGGCAGATTGCTTAATGTTCAGTGGCCCATGATGTTTCCTGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAGAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAAGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGACGCTTTGTGAAAGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCACAACCTTACAAAAAATATTACTGCTGACGTGCACACAAGAGGAAGCAACGACTCATATGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTAATTATGATAGTAGATACTTGGCTTCTGAGAAGCCACAAAAAAGTCATTATGGGCACTATGTCTCTCCGGAAGATGAAAGGAAAATTTCCAGTAAGGACAAATATGATCGAGATCACTATCATAGGTTCTTAGATCAAAGCAGTGGTCCTAGCCAGTCACACAAATGGAAGAGATATCCTAATGATCGAGATGATGAGGTGACAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGACTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGGGTGGTTCAAGTGCAAGGAAAGTTAGCAATAAGTTGAGAGCCAGTGATAGTTGGAAGATGAACACGGCTGATAATCATAGTTCAGAGCATTTGGTGTTTAATTCATTTAATGATAGGTATACCCCATCTGATTGTCATGATGAATTGGAAGATGAGTACTCCACTGTCAGCAGATTATCTAAGTCCAGATGAACTTTAATTTTATGATCATTGAATGATGGGAAGGTGTGCTGCATGCCGTGCCATACTTCTTAACCTAACAAATCTCTACCTTGTGCATGAAGTTTTATCTGGCTTGAGAAATTTTATCCTCACCTGTATCCTCCATAGTATCCTTGAAGTTTATATCCCATTTTCTTATACATTGAATCTGTCTCAATCTCTACTCTTTCATTTATGTTTCTGAGAGATTTGCTACTAACTTAATGTTGCACTTGCATTTATTTGATTTACATCATCATCGTATAAAAGATACCAATTTTACATCCACTTTTTCTGTTCTGGGGTTGTCTTATAATTCTCGATTAATTACGAAGACAGATTAATGAAGTCGTCAGAAAAATGATTCATAAATAACATTTTATGGAGGGTGCAACCAACTGTTAGTTATGGTTATGAAATTACCATGTTATACGGTTGTTTCTTTTTGTACTCCTTGTTTGCTATGGTTTACACATTTTGGTGTTGCATCACTTGACCTTTACCTCTGCTTTTCGGTTGCAATTGGAGTTGGTCATTCAAAATCTTGTGGAAAATTAAAAAAATGATATACTCAGAAAAAAGATCGTAGAGTTTAGGCATTATAAACTGGTTAGTGAGGCAATATCATTGAATAAGCCAAACTTGTTTCCGGTCTCTTCCTAGTGAGATGAAAAGTAGTATAAGCTTTGGAGGGCTTATTGATGCATAATGATTTCACTTCAAAAACTTACTCATGTTCGTTATGGAGTGGTATGAAAGATTAATCTAGCAACTTAACAAACATTTTAGGCAATTACACTCAGTACTAGAACTCAACCTTATTACTGATATTCTATTAGTTCTAACTTTTGTATTGCATTTAGTGTTTTGATCAACAGCCCAGTTTATCAGTAAAGTATTGAAGGCAGTCTGGTGATGAATTTGATCAGAGACCTACAACCCACAGCGTTTCAGATCGTCTGTTGCAGGTTGCTTCATTCTACATTTATGCTCACATCGTCTGTTGCAGGTTGCTTCATCCTACATTTATGCTCACAGGAATTTCAGCACAAACAAAATTATCGTACTGATCAGCATTTGTTATTTTGTTGTTCCTATGGAAAATTATTAAAATATGGGCATGTGGTAATTCAATGACATAAACATATGCTGCAACCTTACTAAAAAATTGTTTTTTGAAGAGTTTATCTTTAAGATCTTGGAGTTTTGCTCGAAAAACTCGAGCAGTGAGATATGGTCTATCTTGTGGTCGTTGTCCCAGTAAAAGCTCATCTTGAATTTCTATCCAATATGAATTGCACGTCATTGTAATAAAAAGATCAGGTTTTCTAAATCGTTGTACAAAGGCCATTGCATCTAAGTATCGTTGTCGCATATCTCTTGGACCACCAACAAAAGTGCTAG

Coding sequence (CDS)

ATGAGAGCCATCAACCCTTCTCTTCCATTTCCTCCTTACCAAACTTTCCCCAATTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCACATTCTCAATCTCAACATCCTCCTCTCGACTTGTCTTCGTCCTTTTCCTCCCTCAATAATCTCATCCATTTCGCCAACCAAACCCTTCAATCTCTCTCCTACCTCACCCCATCTGATTTCGCGAACCATTCTCATCTCCTTCACTGCCATTTTGATCGTCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGCCACTCCCTTCTCTGCCCTTCTGCTTCCCTGCCTCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCATTCATCTCGTCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATTCTGATGCCACTTCCAATTTCTTCTATGTTGATTGCCCTGGCGTCGTTGCCTTGTCTAACCTTGATGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCTGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTCGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCATCTGACTTGTGGAATCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAGTAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGGCTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATCGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATTTATAAGGAAGCTTTGGGGTTTCAAGTTGCGTTGGAAAAAGGTAATGGAATGGAGGGTGAATCAGGGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTGGCATCGCAGCTTTCCGTGCTGTACGGGGAAACAAACGGGAACTTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATCGGGGTTGTTGCTTTTACAGTCCGAACAAAAATCTACGGAGAGTCTGACTTTAGGAGAGGGTTCTCATGATCTGGAAATTAGTTGTAGTGACACACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCCATGCGGTCAATTGTAGTGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCGTTACGCTTTGCTCATCTGCAAACTAAATATCAGCGGGTTTCGGAGTATAATGATATCTTTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATAATGAGTTTTTCTGTTCATCTATTGATGATTTTAAATCTCATGAATTCTTCCTATTGACTGCTCTGAATTGGGATACCATGGGAATAGAACATAAAAATTTATTCTCTAATTCCAACGGAGCTTATGAGATGGCTGTTTTGTCATTCTTATCTTGCATTTTGTTCACCTCCTTAAATAAACCTCCTGTGGCAATAAATGATGAAGCAGCAGCAGCTGGCAGATTGCTTAATGTTCAGTGGCCCATGATGTTTCCTGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAGAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAAGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGACGCTTTGTGAAAGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCACAACCTTACAAAAAATATTACTGCTGACGTGCACACAAGAGGAAGCAACGACTCATATGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTAATTATGATAGTAGATACTTGGCTTCTGAGAAGCCACAAAAAAGTCATTATGGGCACTATGTCTCTCCGGAAGATGAAAGGAAAATTTCCAGTAAGGACAAATATGATCGAGATCACTATCATAGGTTCTTAGATCAAAGCAGTGGTCCTAGCCAGTCACACAAATGGAAGAGATATCCTAATGATCGAGATGATGAGGTGACAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGACTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGGGTGGTTCAAGTGCAAGGAAAGTTAGCAATAAGTTGAGAGCCAGTGATAGTTGGAAGATGAACACGGCTGATAATCATAGTTCAGAGCATTTGGTGTTTAATTCATTTAATGATAGGTATACCCCATCTGATTGTCATGATGAATTGGAAGATGAGTACTCCACTGTCAGCAGATTATCTAAGTCCAGATGA

Protein sequence

MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSKKQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRYPNDRDDEVTAETRHHETKKLTSSSSHGRSSSSSRSGGGSSARKVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKSR

Homology

[Close]

BLAST of CsGy1G031540.1 vs. NCBI nr
Match: XP_008443753.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo])

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 666/839 (79.38%), Postives = 681/839 (81.17%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           MRA+NPSLPFPP QTFP+FLPPNXXXXXXXXXXXXXXXX   LDL SSFSSLN LIH AN
Sbjct: 1   MRAVNPSLPFPPNQTFPSFLPPNXXXXXXXXXXXXXXXXHPSLDLPSSFSSLNTLIHLAN 60

Query: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSL 120
           QTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 120

Query: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180
           LYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFY DCPGVVALSNLDEM
Sbjct: 121 LYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLDEM 180

Query: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240
           SKVFTLPRVLAVHCANFVGNDH EMNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFVV
Sbjct: 181 SKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVV 240

Query: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300
           LRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL
Sbjct: 241 LRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300

Query: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360
           EKGNGMEG S NSCFKCPILIQVLMWLASQLSVLYGETNG FFAVNMLRQCILDAA   L
Sbjct: 301 EKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL-RL 360

Query: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVILVS 420
           LL SEQKSTE LTLG+G HDLEISCSD QSVKMNELDQKVVNNG+      VNC VILVS
Sbjct: 361 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 420

Query: 421 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEH 480
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKRRCNYRPIIEH
Sbjct: 421 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 480

Query: 481 DGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLS 540
           DGLPKQQS+NE                                                 
Sbjct: 481 DGLPKQQSYNE------------------------------------------------- 540

Query: 541 CILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYR 600
                                             DANKTKTREELLAEERDYKRRRMSYR
Sbjct: 541 ----------------------------------DANKTKTREELLAEERDYKRRRMSYR 600

Query: 601 GKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVH 660
           GKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQPSDHN+T+NI ADVH
Sbjct: 601 GKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVH 660

Query: 661 TRGSNDSYGDARHSSGHSKKQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRD 720
           TRGSND  GDARHSSGHSKKQS +DSRYL S+KPQK HY HY SPEDERKIS KDKYDRD
Sbjct: 661 TRGSNDPCGDARHSSGHSKKQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRD 720

Query: 721 HYHRFLDQSSGPSQSHKWKRYPNDRDDEVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           HYHRF DQSS PSQSHKWKRYPNDRDDEV               XXXXXXXXXXXXXXXX
Sbjct: 721 HYHRFSDQSSIPSQSHKWKRYPNDRDDEVPAETRHHETKKLASSXXXXXXXXXXXXXXXX 755

Query: 781 XXXXVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKS 835
           XXXX             NTADNHSSEHLV NSF+DRYTPS+CHDELEDEYSTVSRLSKS
Sbjct: 781 XXXXXXXXXXXXXXXXRNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of CsGy1G031540.1 vs. NCBI nr
Match: XP_011660240.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 961.1 bits (2483), Expect = 2.5e-276
Identity = 523/611 (85.60%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60

Query: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSL 120
           QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180
           LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180

Query: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240
           SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV
Sbjct: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240

Query: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300
           LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL
Sbjct: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300

Query: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360
           EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL
Sbjct: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360

Query: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420
           LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA
Sbjct: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420

Query: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEHDGLPK 480
           VAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKR CNYRPIIEHDGLPK
Sbjct: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPIIEHDGLPK 480

Query: 481 QQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFT 540
           QQSHNE                                                      
Sbjct: 481 QQSHNE------------------------------------------------------ 529

Query: 541 SLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAK 600
                                        DANKTKTREELLAEERDYKRRRMSYRGKKAK
Sbjct: 541 ----------------------------QDANKTKTREELLAEERDYKRRRMSYRGKKAK 529

Query: 601 RSTLQVTRDII 612
           RSTLQVTRDI+
Sbjct: 601 RSTLQVTRDIL 529

[Close]

BLAST of CsGy1G031540.1 vs. NCBI nr
Match: XP_004142553.2 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus] >KGN66714.1 hypothetical protein Csa_1G662780 [Cucumis sativus])

HSP 1 Score: 960.7 bits (2482), Expect = 3.3e-276
Identity = 523/611 (85.60%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60

Query: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSL 120
           QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180
           LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180

Query: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240
           SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV
Sbjct: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240

Query: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300
           LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL
Sbjct: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300

Query: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360
           EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL
Sbjct: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360

Query: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420
           LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA
Sbjct: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420

Query: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEHDGLPK 480
           VAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKR CNYRPIIEHDGLPK
Sbjct: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPIIEHDGLPK 480

Query: 481 QQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFT 540
           QQSHNE                                                      
Sbjct: 481 QQSHNE------------------------------------------------------ 528

Query: 541 SLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAK 600
                                        DANKTKTREELLAEERDYKRRRMSYRGKKAK
Sbjct: 541 -----------------------------DANKTKTREELLAEERDYKRRRMSYRGKKAK 528

Query: 601 RSTLQVTRDII 612
           RSTLQVTRDI+
Sbjct: 601 RSTLQVTRDIL 528

[Close]

BLAST of CsGy1G031540.1 vs. NCBI nr
Match: XP_023530557.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita pepo subsp. pepo] >XP_023530558.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 960.3 bits (2481), Expect = 4.3e-276
Identity = 564/842 (66.98%), Postives = 619/842 (73.52%), Query Frame = 0


Query: 4   INPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFANQTL 63
           +NPSLP     TFPNFL  N                  PLDLSSS SSL NLIH ANQTL
Sbjct: 1   MNPSLP-SSNLTFPNFLLSN---PNPNPNFSLPESRDPPLDLSSSLSSLRNLIHVANQTL 60

Query: 64  QSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQS 123
           QSLSYL    TPS   + S  + C+FDRRHRVPPHSLF HSLLCPSA  P IDPTQL QS
Sbjct: 61  QSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQS 120

Query: 124 LLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDE 183
           LLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DYSD +SNFFY+DCPGVVALSN DE
Sbjct: 121 LLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDE 180

Query: 184 MSKVFTLPRVLAVHCANFVGND--HFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYS 243
           MSKVFTLPRVLAV CANFV +D    EM  +L GIR+LPSDLW LRSEVE+WNDYPS YS
Sbjct: 181 MSKVFTLPRVLAVECANFVCDDDGDREMKCSLKGIRMLPSDLWALRSEVEMWNDYPSVYS 240

Query: 244 FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 303
            +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 241 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 300

Query: 304 VALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAAS 363
           +ALE GNGMEG SGN  FKCPIL+QVL+WLASQLSVLYGE NG FFA+NMLRQ IL AAS
Sbjct: 301 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMNGKFFAINMLRQRILYAAS 360

Query: 364 GLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVI 423
           GL LL  EQK  ES TL EGSH+L  S SDTQSV + ELD+KV+NN +      VNC VI
Sbjct: 361 GLSLLPYEQKRVESPTLVEGSHNLVSSFSDTQSVNLKELDKKVINNVYVTGEETVNCRVI 420

Query: 424 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPI 483
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+N I QRACEERKRRCNYRPI
Sbjct: 421 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYICQRACEERKRRCNYRPI 480

Query: 484 IEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLS 543
           IEHDGLPKQQSH+E                                              
Sbjct: 481 IEHDGLPKQQSHDE---------------------------------------------- 540

Query: 544 FLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRM 603
                                                D +KTKT+EELLAEERDYKRRRM
Sbjct: 541 ------------------------------------QDRDKTKTKEELLAEERDYKRRRM 600

Query: 604 SYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITA 663
           SYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVKG EERGIKSEQP+DH +T++  A
Sbjct: 601 SYRGKKAKRSTLQVTRDIIEEYMDEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIA 660

Query: 664 DVHTRGSNDSYGDAR-HSSGHSKKQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDK 723
           D HT+GSN SYG+ R H+S HS+KQSNYD+RY ASEKP K  YGHY SPEDERK   KDK
Sbjct: 661 DGHTKGSNSSYGETRHHTSSHSRKQSNYDNRYSASEKPPKGRYGHYGSPEDERKSVGKDK 720

Query: 724 YDRDHYHRFLDQSSGPSQSHKWKRYPNDRDDE---VTXXXXXXXXXXXXXXXXXXXXXXX 783
           YDR+HYHRF D+SS PS+SHKWKRYP+DRDDE    T       XXXXXXXXXXXXXXXX
Sbjct: 721 YDREHYHRFSDRSSSPSESHKWKRYPSDRDDEEPAETRHHKSRGXXXXXXXXXXXXXXXX 756

Query: 784 XXXXXXXXXXXVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTV 831
           XXXXXXXXXXX  +KLRASDSWK NTADNHSS+  V NSFNDRYTPS CHD+LED++ST 
Sbjct: 781 XXXXXXXXXXXDGHKLRASDSWKRNTADNHSSDSSVLNSFNDRYTPSKCHDQLEDDHSTG 756

[Close]

BLAST of CsGy1G031540.1 vs. NCBI nr
Match: XP_022927551.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita moschata])

HSP 1 Score: 952.6 bits (2461), Expect = 9.0e-274
Identity = 560/845 (66.27%), Postives = 616/845 (72.90%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           +RA+NPSLP     T+P F P N     XXX          PLDLSSS  SL NLIH AN
Sbjct: 22  LRAMNPSLP-SSNLTYPKFQPSN---PNXXXNFSLPESREPPLDLSSSLYSLRNLIHVAN 81

Query: 61  QTLQSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQL 120
           QTLQSLSYL    TPS   + S  + C+FD RHRVPPHSLF HSLLC SA  P IDPTQL
Sbjct: 82  QTLQSLSYLTLIQTPSPKPDDSGFVQCNFDLRHRVPPHSLFHHSLLCTSAPPPRIDPTQL 141

Query: 121 FQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSN 180
            QSLLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DYSD +SNFFY+DCPGVVALSN
Sbjct: 142 LQSLLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSN 201

Query: 181 LDEMSKVFTLPRVLAVHCANFVGND--HFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPS 240
            DEMSKVFTLPRVLAV CANFV +D    EM S+L GI +LPSDLW LRSEVE+WNDYPS
Sbjct: 202 RDEMSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIIMLPSDLWALRSEVEMWNDYPS 261

Query: 241 KYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEAL 300
            YS +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+
Sbjct: 262 VYSHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAM 321

Query: 301 GFQVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILD 360
           GFQ+ALE GNGMEG SGN  FKCPIL+QVL+WLASQLSVLYGE NG FFA+NMLRQ IL 
Sbjct: 322 GFQIALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMNGKFFAINMLRQRILY 381

Query: 361 AASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNC 420
           AASGL LL  EQK  ES TL EGSH+L  SCSDT+SV + ELD+KV+NN +      VNC
Sbjct: 382 AASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTRSVNLKELDKKVINNVYVSGEETVNC 441

Query: 421 SVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNY 480
            VI VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+N I QRACEERKRRCNY
Sbjct: 442 RVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCNY 501

Query: 481 RPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMA 540
           RPIIEHDGLPKQQSH+E                                           
Sbjct: 502 RPIIEHDGLPKQQSHDE------------------------------------------- 561

Query: 541 VLSFLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKR 600
                                                   D +KTKT+EELLAEERDYKR
Sbjct: 562 ----------------------------------------DRDKTKTKEELLAEERDYKR 621

Query: 601 RRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKN 660
           RRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVKG EERGIKSEQP+DH +T++
Sbjct: 622 RRMSYRGKKAKRSTLQVTRDIIEEYMDEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRD 681

Query: 661 ITADVHTRGSNDSYGDARHS-SGHSKKQSNYDSRYLASEKPQKSHYGHYVSPEDERKISS 720
             AD HT+GSN SYG+ RH  S HS+KQSNYD+RY ASEKP K  YGHY SPEDERK   
Sbjct: 682 SIADGHTKGSNSSYGETRHHISSHSRKQSNYDNRYSASEKPPKGRYGHYGSPEDERKSVG 741

Query: 721 KDKYDRDHYHRFLDQSSGPSQSHKWKRYPNDRDDE---VTXXXXXXXXXXXXXXXXXXXX 780
            DKYDR+HYHRF D+SS PSQSHKWKRYP+DRDDE    T         XXXXXXXXXXX
Sbjct: 742 IDKYDREHYHRFSDRSSSPSQSHKWKRYPSDRDDEKPAETRHHKSRGLSXXXXXXXXXXX 779

Query: 781 XXXXXXXXXXXXXXVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEY 831
           XXXXXXXXXXXXX   +KLRASDSWK NTADNHSS+  V N FNDRYTPS CHD+LED++
Sbjct: 802 XXXXXXXXXXXXXKDGHKLRASDSWKRNTADNHSSDSSVLNPFNDRYTPSKCHDQLEDDH 779

[Close]

BLAST of CsGy1G031540.1 vs. TAIR10
Match: AT3G04160.2 (unknown protein)

HSP 1 Score: 362.1 bits (928), Expect = 9.4e-100
Identity = 257/668 (38.47%), Postives = 340/668 (50.90%), Query Frame = 0


Query: 44  DLSSSFSSLNNLIHFANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHRVPPH 103
           +LS + SSL +L+    +TL SLS     D   HS LL          C FD  H +PP 
Sbjct: 56  ELSGTLSSLKSLLSECQRTLDSLSQNLALD---HSSLLQKDENGCFVRCPFDSNHFMPPE 115

Query: 104 SLFRHSLLCPSASLPPIDPTQLFQSL-LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSL 163
           +LF HSL CP+     +D   L +S   Y  TL    +L         L + D DLC SL
Sbjct: 116 ALFLHSLRCPNT----LDLIHLLESFSSYRNTLELPCEL--------QLNNGDGDLCISL 175

Query: 164 TDYSDATSNFFYVDCPGVVALSNLDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNG-I 223
            D +D  SNFFY DCPG V  S LD   +  TLP VL+V C++FVG+D       L+  +
Sbjct: 176 DDLADFGSNFFYRDCPGAVKFSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCL 235

Query: 224 RILPSDLWNLRSEVEIWNDYPSKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDV 283
            +LPSDL  +++E++ W D+PS YS  VL SI+GS++   S L  WI+ NS RYGV+ID 
Sbjct: 236 GVLPSDLCAMKNEIDQWRDFPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDT 295

Query: 284 ALRDHIFLLFRLCFMAIYKEALGFQV---ALEKGNGMEGESGNSCFKCPILIQVLMWLAS 343
            +RDHIFLLFRLC  +  KEA GF++   A + G        +S F+CP+ IQVL WLAS
Sbjct: 296 FMRDHIFLLFRLCLKSAVKEACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLAS 355

Query: 344 QLSVLYGETNGNFFAVNMLRQCILDAASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQ 403
           QL+VLYGE NG FFA++M +QCI+++AS ++L + E   ++   + E   D  +   D  
Sbjct: 356 QLAVLYGEGNGKFFALDMFKQCIVESASQVMLFRLEGTRSKCSGVVEDLDDARLRNKDV- 415

Query: 404 SVKMNELDQKVVNNGHAVNC-------SVILVSQVAAAVAALHERFLLEEKIKALRFAHL 463
                 + +K   N     C        VI VS+V+AAVAAL+ER LLEEKI+A+R+A  
Sbjct: 416 ------IMEKPFENSSGGECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQP 475

Query: 464 QTKYQRVSE--YNDIFQRACEERKRRCNYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEF 523
            T+YQR+    +  +      ER RRC+YRPII+HDG P+Q+S N+              
Sbjct: 476 LTRYQRIISCLHLSLIPHDVSERNRRCSYRPIIDHDGRPRQRSLNQ-------------- 535

Query: 524 FLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFTSLNKPPVAINDEAAAAGRLL 583
                                                                       
Sbjct: 536 ------------------------------------------------------------ 595

Query: 584 NVQWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMK 643
                    D +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  
Sbjct: 596 ---------DMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLHDMIEEYTEEIKL 618

Query: 644 AGGIGRFVKGP--EERGIKSEQPSDHNLTKNI-TADVHTRGSN----DSYGDARHSSGHS 682
           AGGIG F KG   + R        + +   +I + D   +G N    +   D R +S   
Sbjct: 656 AGGIGCFEKGMPLQSRSPIGNDQKESDFGYSIPSTDKQWKGENRADIEYPIDNRQNSDKV 618

[Close]

BLAST of CsGy1G031540.1 vs. Swiss-Prot
Match: sp|Q9M8X2|U1148_ARATH (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP48 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.6e-101
Identity = 260/666 (39.04%), Postives = 343/666 (51.50%), Query Frame = 0


Query: 44  DLSSSFSSLNNLIHFANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHRVPPH 103
           +LS + SSL +L+    +TL SLS     D   HS LL          C FD  H +PP 
Sbjct: 56  ELSGTLSSLKSLLSECQRTLDSLSQNLALD---HSSLLQKDENGCFVRCPFDSNHFMPPE 115

Query: 104 SLFRHSLLCPSASLPPIDPTQLFQSL-LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSL 163
           +LF HSL CP+     +D   L +S   Y  TL    +L         L + D DLC SL
Sbjct: 116 ALFLHSLRCPNT----LDLIHLLESFSSYRNTLELPCEL--------QLNNGDGDLCISL 175

Query: 164 TDYSDATSNFFYVDCPGVVALSNLDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNG-I 223
            D +D  SNFFY DCPG V  S LD   +  TLP VL+V C++FVG+D       L+  +
Sbjct: 176 DDLADFGSNFFYRDCPGAVKFSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCL 235

Query: 224 RILPSDLWNLRSEVEIWNDYPSKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDV 283
            +LPSDL  +++E++ W D+PS YS  VL SI+GS++   S L  WI+ NS RYGV+ID 
Sbjct: 236 GVLPSDLCAMKNEIDQWRDFPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDT 295

Query: 284 ALRDHIFLLFRLCFMAIYKEALGFQV---ALEKGNGMEGESGNSCFKCPILIQVLMWLAS 343
            +RDHIFLLFRLC  +  KEA GF++   A + G        +S F+CP+ IQVL WLAS
Sbjct: 296 FMRDHIFLLFRLCLKSAVKEACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLAS 355

Query: 344 QLSVLYGETNGNFFAVNMLRQCILDAASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQ 403
           QL+VLYGE NG FFA++M +QCI+++AS ++L + E   ++   + E   D  +   D  
Sbjct: 356 QLAVLYGEGNGKFFALDMFKQCIVESASQVMLFRLEGTRSKCSGVVEDLDDARLRNKDV- 415

Query: 404 SVKMNELDQKVVNNGHAVNC-------SVILVSQVAAAVAALHERFLLEEKIKALRFAHL 463
                 + +K   N     C        VI VS+V+AAVAAL+ER LLEEKI+A+R+A  
Sbjct: 416 ------IMEKPFENSSGGECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQP 475

Query: 464 QTKYQRVSEYNDIFQRACEERKRRCNYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFL 523
            T+YQR +E   +  +A EER RRC+YRPII+HDG P+Q+S N+                
Sbjct: 476 LTRYQRAAELGFMTAKADEERNRRCSYRPIIDHDGRPRQRSLNQ---------------- 535

Query: 524 LTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFTSLNKPPVAINDEAAAAGRLLNV 583
                                                                       
Sbjct: 536 ------------------------------------------------------------ 595

Query: 584 QWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAG 643
                  D +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AG
Sbjct: 596 -------DMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLHDMIEEYTEEIKLAG 616

Query: 644 GIGRFVKGP--EERGIKSEQPSDHNLTKNI-TADVHTRGSN----DSYGDARHSSGHSKK 682
           GIG F KG   + R        + +   +I + D   +G N    +   D R +S   K+
Sbjct: 656 GIGCFEKGMPLQSRSPIGNDQKESDFGYSIPSTDKQWKGENRADIEYPIDNRQNSDKVKR 616

[Close]

BLAST of CsGy1G031540.1 vs. TrEMBL
Match: tr|A0A1S3B9I2|A0A1S3B9I2_CUCME (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487266 PE=4 SV=1)

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 666/839 (79.38%), Postives = 681/839 (81.17%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           MRA+NPSLPFPP QTFP+FLPPNXXXXXXXXXXXXXXXX   LDL SSFSSLN LIH AN
Sbjct: 1   MRAVNPSLPFPPNQTFPSFLPPNXXXXXXXXXXXXXXXXHPSLDLPSSFSSLNTLIHLAN 60

Query: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSL 120
           QTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 120

Query: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180
           LYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFY DCPGVVALSNLDEM
Sbjct: 121 LYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLDEM 180

Query: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240
           SKVFTLPRVLAVHCANFVGNDH EMNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFVV
Sbjct: 181 SKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVV 240

Query: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300
           LRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL
Sbjct: 241 LRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300

Query: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360
           EKGNGMEG S NSCFKCPILIQVLMWLASQLSVLYGETNG FFAVNMLRQCILDAA   L
Sbjct: 301 EKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL-RL 360

Query: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVILVS 420
           LL SEQKSTE LTLG+G HDLEISCSD QSVKMNELDQKVVNNG+      VNC VILVS
Sbjct: 361 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 420

Query: 421 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEH 480
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKRRCNYRPIIEH
Sbjct: 421 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 480

Query: 481 DGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLS 540
           DGLPKQQS+NE                                                 
Sbjct: 481 DGLPKQQSYNE------------------------------------------------- 540

Query: 541 CILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYR 600
                                             DANKTKTREELLAEERDYKRRRMSYR
Sbjct: 541 ----------------------------------DANKTKTREELLAEERDYKRRRMSYR 600

Query: 601 GKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVH 660
           GKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQPSDHN+T+NI ADVH
Sbjct: 601 GKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVH 660

Query: 661 TRGSNDSYGDARHSSGHSKKQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRD 720
           TRGSND  GDARHSSGHSKKQS +DSRYL S+KPQK HY HY SPEDERKIS KDKYDRD
Sbjct: 661 TRGSNDPCGDARHSSGHSKKQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRD 720

Query: 721 HYHRFLDQSSGPSQSHKWKRYPNDRDDEVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           HYHRF DQSS PSQSHKWKRYPNDRDDEV               XXXXXXXXXXXXXXXX
Sbjct: 721 HYHRFSDQSSIPSQSHKWKRYPNDRDDEVPAETRHHETKKLASSXXXXXXXXXXXXXXXX 755

Query: 781 XXXXVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKS 835
           XXXX             NTADNHSSEHLV NSF+DRYTPS+CHDELEDEYSTVSRLSKS
Sbjct: 781 XXXXXXXXXXXXXXXXRNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of CsGy1G031540.1 vs. TrEMBL
Match: tr|A0A0A0M085|A0A0A0M085_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662780 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 2.2e-276
Identity = 523/611 (85.60%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60
           MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNXXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFAN 60

Query: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQSL 120
           QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180
           LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDEM 180

Query: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240
           SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV
Sbjct: 181 SKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFVV 240

Query: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300
           LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL
Sbjct: 241 LRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVAL 300

Query: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360
           EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL
Sbjct: 301 EKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGLL 360

Query: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420
           LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA
Sbjct: 361 LLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGHAVNCSVILVSQVAAA 420

Query: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIEHDGLPK 480
           VAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKR CNYRPIIEHDGLPK
Sbjct: 421 VAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPIIEHDGLPK 480

Query: 481 QQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYEMAVLSFLSCILFT 540
           QQSHNE                                                      
Sbjct: 481 QQSHNE------------------------------------------------------ 528

Query: 541 SLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDYKRRRMSYRGKKAK 600
                                        DANKTKTREELLAEERDYKRRRMSYRGKKAK
Sbjct: 541 -----------------------------DANKTKTREELLAEERDYKRRRMSYRGKKAK 528

Query: 601 RSTLQVTRDII 612
           RSTLQVTRDI+
Sbjct: 601 RSTLQVTRDIL 528

[Close]

BLAST of CsGy1G031540.1 vs. TrEMBL
Match: tr|M5W6C9|M5W6C9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa001825mg PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 2.1e-125
Identity = 327/812 (40.27%), Postives = 423/812 (52.09%), Query Frame = 0


Query: 42  PLDLSSSFSSLNNLIHFANQTLQSLSYLTPSDFANH----SHLLHCHFDRRHRVPPHSLF 101
           P DLS++ SSL++L+  + QTL SLS L P    N+    S L+ C F+  HRV PHSLF
Sbjct: 45  PPDLSTTISSLDSLVRDSYQTLDSLSALLPLQNPNYDNPQSSLIPCPFNPHHRVHPHSLF 104

Query: 102 RHSLLCPSASLPPIDPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTD-Y 161
            HSL CPS   P          L YP+TL SS Q   E  F Q L  S+ADL  SL   Y
Sbjct: 105 SHSLHCPSHPHP-------LPHLNYPKTLKSSDQSQTEKSFLQTLHGSEADLRLSLEHYY 164

Query: 162 SDATSNFFYVDCPGVVALSNLDEMSKVFTLPRVLAVHCANFVGNDHFE-MNSTLNGIRIL 221
           +D  SNFFY DCPGVV  S LD ++++FTLP +L+V CANF+G    E M+      RIL
Sbjct: 165 ADFGSNFFYSDCPGVVNFSGLDGVNRMFTLPLILSVECANFIGRGEREIMDFEKEWCRIL 224

Query: 222 PSDLWNLRSEVEIWNDYPSKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALR 281
           PS+LW +++EVE WN++P  YS+ VL +ILG  +     + TWII NSP+YG+VIDVA+R
Sbjct: 225 PSELWAIKTEVEGWNEFPFTYSYRVLCAILGLGVVKEYDVGTWIIANSPQYGIVIDVAMR 284

Query: 282 DHIFLLFRLCFMAIYKEALGFQVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLY 341
           DHIFLL RLC  AI +EAL            EG+  ++ F+CP L+Q LMWLASQLS+LY
Sbjct: 285 DHIFLLSRLCLKAILREAL--------SKVKEGDPESTHFECPTLVQALMWLASQLSILY 344

Query: 342 GETNGNFFAVNMLRQCILDAASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVK-MN 401
           G  NG  F +N+L++C+LDAA G L    EQ+ TE   L EG  +L+ + S  +  + M 
Sbjct: 345 GAQNGKLFVINVLKKCLLDAALGSLTFPLEQQVTEYPALEEGLLNLDANGSGVRDAEVMK 404

Query: 402 ELDQKVVNNG---HAVNCSVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSE 461
            L      N      +    + VSQVAAAVAALHERFLLEEK+KA R +   T+YQR+ +
Sbjct: 405 PLSTHGGENSMVKENIFSREVFVSQVAAAVAALHERFLLEEKLKAQRVSQTFTRYQRMVD 464

Query: 462 YNDIFQRACEERKRRCNYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTM 521
           +  + QRA EERK R  YRPII+HDGLP+QQS N+                         
Sbjct: 465 HEYVSQRADEERKNRSQYRPIIDHDGLPRQQSCNQ------------------------- 524

Query: 522 GIEHKNLFSNSNGAYEMAVLSFLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDA 581
                                                                     + 
Sbjct: 525 ----------------------------------------------------------ET 584

Query: 582 NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP 641
           NK KTREELLAEERDYKRRRMSYRGKK KR+TLQV RDIIEEYMEEI +AGGIG F KG 
Sbjct: 585 NKPKTREELLAEERDYKRRRMSYRGKKVKRTTLQVMRDIIEEYMEEIKQAGGIGCFEKGT 644

Query: 642 EERG-IKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSKKQSNY--------DSR 701
           E  G    E PS   +T +  A+  T+ + DS G +   S      S Y        D+ 
Sbjct: 645 EGEGSFPFELPSAPEITTD--AEKPTKSNYDSAGCSPSRSRKRSHSSYYAIDSVTSRDAS 704

Query: 702 YLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRYPNDRDD 761
              SEKP++S  GH+   ED R   S+D+ D   + R  +    P  +H   R+  +RDD
Sbjct: 705 AKGSEKPRRSLQGHHHYLEDHRS-DSRDRRDMVKHSRSPESRRNPGWAHGQTRHHRERDD 747

Query: 762 EVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNKLRASDSWKMNTADNHSSEH 821
                                                 ++K+R        T +NH+S  
Sbjct: 765 ----LEVRKTKHREISRSSSSISKYRDNRSSSHSNSGENSKVRRD----RYTYENHNSNS 747

Query: 822 LVFNSFNDRYTPSDCHDELEDEYSTVSRLSKS 835
           +V N+F DRY P    D  E++ ST  + +++
Sbjct: 825 VVQNTFEDRYDPLISRDIYEEDLSTDRKYARA 747

[Close]

BLAST of CsGy1G031540.1 vs. TrEMBL
Match: tr|A0A2P5FYV9|A0A2P5FYV9_9ROSA (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Trema orientalis OX=63057 GN=TorRG33x02_010370 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121
Identity = 329/808 (40.72%), Postives = 426/808 (52.72%), Query Frame = 0


Query: 42  PLDLSSSFSSLNNLIHFANQTLQSLSYLTPSDFANHSH---LLHCHFDRRHRVPPHSLFR 101
           P DLS++ S+LN LI  + QTLQSL  L P    N S+   ++ C F+ +H + P SLF 
Sbjct: 45  PPDLSATLSTLNGLIQRSQQTLQSLFTLLPLQNPNQSNFNGVVPCPFNPQHLMQPESLFA 104

Query: 102 HSLLCPSASLPPIDPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTD-YS 161
           H L C S+  P      L   L YPQTL S +    EN F +    SD++LCFSL + Y+
Sbjct: 105 HFLNCSSSPCPL--QADLLPPLNYPQTLKSPKSTQAENGFLRTFHGSDSELCFSLDEFYA 164

Query: 162 DATSNFFYVDCPGVVALSNLDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIR-ILP 221
           D  SN FY DCPGVV+LS+LD +++ F+LP VL+V CAN V     E NS     R ILP
Sbjct: 165 DFGSNLFYHDCPGVVSLSDLDGVNRTFSLPAVLSVQCANVVSQGDRETNSFERERRKILP 224

Query: 222 SDLWNLRSEVEIWNDYPSKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRD 281
           S+LW  R+EVE WN+YP  YS+ VL +ILG ++     L  W+I +SPRYGVVID A+RD
Sbjct: 225 SELWATRAEVEAWNEYPIVYSYRVLYAILGLDLTKARGLARWVIASSPRYGVVIDAAMRD 284

Query: 282 HIFLLFRLCFMAIYKEALGFQVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYG 341
           HIFLL RLC  AI  EAL     L      E  S +  F CPI++QVLMWL SQLSVLYG
Sbjct: 285 HIFLLCRLCLKAILMEAL----TLVDNRDRETISESMNFSCPIVVQVLMWLRSQLSVLYG 344

Query: 342 ETNGNFFAVNMLRQCILDAASGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNEL 401
           E NG  FA+N+ +QCIL+A SGL++   EQK TES  L       +++ +D + +++   
Sbjct: 345 EINGKLFAINIFKQCILEAVSGLVIFSLEQKVTESPALEGVGRSSDVNSNDIRGLEVQNP 404

Query: 402 DQKVVNN------GHAVNCSVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVS 461
            +K  +         +V   VI VSQV AAVAALHER LLEEKIK LRF      YQR++
Sbjct: 405 SEKNTDGEQSSIVEESVTSGVIFVSQVVAAVAALHERSLLEEKIKGLRFYRPLNNYQRMA 464

Query: 462 EYNDIFQRACEERKRRCNYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDT 521
           E++ + QRA EERK+R  YRPIIEHDGLP+ +  NE                        
Sbjct: 465 EHDYVSQRADEERKKRPQYRPIIEHDGLPQLKLSNE------------------------ 524

Query: 522 MGIEHKNLFSNSNGAYEMAVLSFLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPD 581
                                                                      +
Sbjct: 525 -----------------------------------------------------------E 584

Query: 582 ANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKG 641
             KTKTREELLAEERDYKRRRMSYRGKKAKRS L+V RDIIE+YM+EI +AGGIG F KG
Sbjct: 585 TGKTKTREELLAEERDYKRRRMSYRGKKAKRSHLEVMRDIIEDYMDEIKQAGGIGCFEKG 644

Query: 642 PEERGIKSEQPSDHNLTKNITADVH-TRGSNDSYGDARHSSGHSKKQ--SNYDSRYLAS- 701
               G++   PS      ++T  V   +  N     A  S  + +KQ  S+Y S+   S 
Sbjct: 645 ---TGVEDVLPSKPPYASDMTVHVDMPKIRNYVSSTAGDSPNYHRKQLHSDYTSQATTSK 704

Query: 702 -------EKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRYPND 761
                  E+ ++  YG++ S ED+  + S+DK DR++Y R    S    +S +  R   +
Sbjct: 705 GHLDKDYEQSRRDFYGYHESVEDQTGV-SRDKRDREYYSR----SPRQVRSSERPRKLRE 749

Query: 762 RDDEVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSNKLRASDSWKMNTADNHS 821
            + EVT                           XXXXXXX             +  +N S
Sbjct: 765 HEMEVT------GSKHHETKHSSSRMSKYRDNRXXXXXXXXXXXXXXXXXXXXDKYENRS 749

Query: 822 SEHLVFNSFNDRYTPSDCHDELEDEYST 828
           SE L+ N+F+DRY PS+ H+  ED  ST
Sbjct: 825 SEPLLRNTFSDRYDPSESHEIYEDNDST 749

[Close]

BLAST of CsGy1G031540.1 vs. TrEMBL
Match: tr|W9S254|W9S254_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006471 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-120
Identity = 340/854 (39.81%), Postives = 445/854 (52.11%), Query Frame = 0


Query: 8   LPFPPYQTFPNFLPPN-----XXXXXXXXXXXXXXXXXXPLDLSSSFSSLNNLIHFANQT 67
           LP P  Q   +FLPPN     XXXXXXXXXXXXX     PLD S++ SSLN LIH + QT
Sbjct: 4   LPTPFSQPSFHFLPPNXXXXXXXXXXXXXXXXXXNLTPQPLDFSATLSSLNGLIHHSEQT 63

Query: 68  LQSLSYLTPSDFANHSH---LLHCHFDRRHRVPPHSLFRHSLLCPSASLPPIDPTQLFQS 127
           L++L  L P    N +H   ++ C F+ +H + P SLF H L C S+  P      L   
Sbjct: 64  LRALFSLLPLQNPNQAHSNGVVPCPFNSQHLMHPSSLFSHFLHCSSSPCP--IQFDLLPQ 123

Query: 128 LLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTD-YSDATSNFFYVDCPGVVALSNLD 187
           L Y +TL+SS     E  F Q L  SD++LCFSL D YS    NFFY DC GVV LS LD
Sbjct: 124 LNYTETLNSSDSSKAERGFLQTLHGSDSELCFSLDDFYSQFGFNFFYNDCHGVVNLSALD 183

Query: 188 EMSKVFTLPRVLAVHCANFVGNDHFEMNS-TLNGIRILPSDLWNLRSEVEIWNDYPSKYS 247
            +S+ FTLP  L+V CANFV N+  E  S      +ILPS+LW +R+E+E WN+YP+ YS
Sbjct: 184 GISRTFTLPVFLSVECANFVSNNEEERKSFERKNRKILPSELWAIRAEIEAWNEYPNVYS 243

Query: 248 FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 307
           + VL +ILG +      L  W+I NSP+YGVVID A+RDHIFLL RLC  AI KEAL   
Sbjct: 244 YRVLYAILGLDFISVCDLARWVIANSPQYGVVIDTAMRDHIFLLCRLCLKAILKEALNL- 303

Query: 308 VALEKGNGMEGESGNSC-FKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAA 367
                GN    +  NS  F CPIL+Q LMWLASQLS+LYGE NG FFA+N+L+QC+LDAA
Sbjct: 304 ----VGNCNSVKILNSMNFSCPILVQALMWLASQLSILYGEMNGKFFALNILKQCVLDAA 363

Query: 368 SGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQ--KVVNNG-------HAV 427
           SGL+    E+  TE+  L E    L    S+   +K +E+ +  ++  NG        + 
Sbjct: 364 SGLVFFSLEKSVTETPALEEVPQSL--VDSNGNGIKGSEVQKPLEIRRNGEVNSVVEESF 423

Query: 428 NCSVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRC 487
              VILVSQ+AAA+AALHER LLE KIK LRF      YQRV+E++ +  RA EER++R 
Sbjct: 424 TSGVILVSQLAAAIAALHERSLLEGKIKGLRFHQPLNNYQRVAEHDYVSHRADEEREKRP 483

Query: 488 NYRPIIEHDGLPKQQSHNEFFCSSIDDFKSHEFFLLTALNWDTMGIEHKNLFSNSNGAYE 547
            YRPIIEHDGLP+ +  NE                                         
Sbjct: 484 QYRPIIEHDGLPRLKVSNE----------------------------------------- 543

Query: 548 MAVLSFLSCILFTSLNKPPVAINDEAAAAGRLLNVQWPMMFPDANKTKTREELLAEERDY 607
                                                     + +KTKTREELLAE+RDY
Sbjct: 544 ------------------------------------------ETSKTKTREELLAEDRDY 603

Query: 608 KRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLT 667
           KRRRMSYR KK KR+ L+V RDIIE++M+EI +AGGIG F KG +       +PS     
Sbjct: 604 KRRRMSYRAKKVKRTNLEVMRDIIEDFMDEIKQAGGIGCFEKGAKAEDTLLLKPS---YA 663

Query: 668 KNITADVH-TRGSNDSYGDARHSSGHSKKQSNYDSRYLAS----------EKPQKSHYGH 727
             IT+D++ +   N     A  S    +KQS +D    A+          E+ ++  YG 
Sbjct: 664 SEITSDINMSEKRNYDSSAAGDSPDRHRKQSGFDYGARATTFKGYTHKDYEQTKRGLYGD 723

Query: 728 YVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRYPNDRDDEVTXXXXXXXXXXX 787
           +  P+D+++  S+DK DR++Y R          +H  +R  N+R+   T           
Sbjct: 724 H-EPKDDQRSISRDKRDREYYSRSPRHDRSSDWTHH-RREQNEREGSGTKRHESKHSSSR 752

Query: 788 XXXXXXXXXXXXXXXXXXXXXXXVSNKLRASDSWKMNTADNHSSEHLVFNSFNDRYTPSD 831
                                    +K ++ D    +  +N SS   + N+F DRY PS+
Sbjct: 784 KSKYYVNRLSTFGLTS--------EHKSKSKDRHHGDRYENRSSALFLRNTFEDRYDPSE 752

The following BLAST results are available for this feature:

BLAST of CsGy1G031540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443753.1	0.0e+00	79.38	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo]	[more]
XP_011660240.1	2.5e-276	85.60	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cu...	[more]
XP_004142553.2	3.3e-276	85.60	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cu...	[more]
XP_023530557.1	4.3e-276	66.98	U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita pepo subsp. pe...	[more]
XP_022927551.1	9.0e-274	66.27	U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita moschata]	[more]

BLAST of CsGy1G031540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04160.2	9.4e-100	38.47	unknown protein	[more]

BLAST of CsGy1G031540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M8X2\|U1148_ARATH	3.6e-101	39.04	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of CsGy1G031540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9I2\|A0A1S3B9I2_CUCME	0.0e+00	79.38	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0M085\|A0A0A0M085_CUCSA	2.2e-276	85.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662780 PE=4 SV=1	[more]
tr\|M5W6C9\|M5W6C9_PRUPE	2.1e-125	40.27	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa001825mg PE=4 SV=1	[more]
tr\|A0A2P5FYV9\|A0A2P5FYV9_9ROSA	1.1e-121	40.72	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Trema orientalis OX=63...	[more]
tr\|W9S254\|W9S254_9ROSA	2.6e-120	39.81	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006471 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR032845	Snrnp48

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G031540	CsGy1G031540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G031540.1	CsGy1G031540.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G031540.1.CDS.7	CsGy1G031540.1.CDS.7	CDS
CsGy1G031540.1.CDS.6	CsGy1G031540.1.CDS.6	CDS
CsGy1G031540.1.CDS.5	CsGy1G031540.1.CDS.5	CDS
CsGy1G031540.1.CDS.4	CsGy1G031540.1.CDS.4	CDS
CsGy1G031540.1.CDS.3	CsGy1G031540.1.CDS.3	CDS
CsGy1G031540.1.CDS.2	CsGy1G031540.1.CDS.2	CDS
CsGy1G031540.1.CDS.1	CsGy1G031540.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G031540.1.exon.8	CsGy1G031540.1.exon.8	exon
CsGy1G031540.1.exon.7	CsGy1G031540.1.exon.7	exon
CsGy1G031540.1.exon.6	CsGy1G031540.1.exon.6	exon
CsGy1G031540.1.exon.5	CsGy1G031540.1.exon.5	exon
CsGy1G031540.1.exon.4	CsGy1G031540.1.exon.4	exon
CsGy1G031540.1.exon.3	CsGy1G031540.1.exon.3	exon
CsGy1G031540.1.exon.2	CsGy1G031540.1.exon.2	exon
CsGy1G031540.1.exon.1	CsGy1G031540.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G031540.1.three_prime_UTR.2	CsGy1G031540.1.three_prime_UTR.2	three_prime_UTR
CsGy1G031540.1.three_prime_UTR.1	CsGy1G031540.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 816..835
None	No IPR available	PANTHER	PTHR21402	UNCHARACTERIZED	coord: 571..719
None	No IPR available	PANTHER	PTHR21402	UNCHARACTERIZED	coord: 44..485
IPR032845	U11/U12 small nuclear ribonucleoprotein 48kDa protein	PANTHER	PTHR21402:SF10	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN	coord: 571..719
IPR032845	U11/U12 small nuclear ribonucleoprotein 48kDa protein	PANTHER	PTHR21402:SF10	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN	coord: 44..485