CsGy1G029840.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGAAGATAAATTTGTAATATAATTTTAAGAATCTTTTTGAATTTTCGTAAGAGAGGGAGACTTCAAAAGAGTCCCCCTCTGCCCTATCTATCGAGAGTCGAGACTTCCGAGTCTAATTTCAATTCCCTTCTCCATCCGACCCTTTCATGGTTCTTCCAAATTTACCCCAAATTTCTCAAGCTTTCTGTTTACAGACACGTATGTAAACGGACCCTCAATCTTCTCCTTCCTCACTGCTCCCCAATTTTCAAACCCTATCATGGATTCCCTCCGTTCTACTTACAAAGACGAAGACGATGAAGAAGATGAGTCCGTTCGCCCTTCTGAGATCGACCCTCCTGAGCTTGCTGATCCACCAATGGATACTAACGTCAGCGGCTCCTCAACTGACCCCCAGGACGGTACCAGACAAGACCCACCTGATGCCTCTGAAGAAATATCCGAAGAGGAACCCGCCTCCGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAATGAAGACGATGATGAAGACCCACCTTCGAAAAAGCAAAAGCAATTATCTTCGCTTAACCAACCGGTGGAGGAGGATAAATCGGCATTACCCGGATCGAATTCTGCTAAAAACGACGGTTCCGCCGGTGGCAATGCTGCTCCGGTGGCCACGGCTTTGAATCCGAAGAAATCAAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACCCGGAAAGGGAAAAAGAAGAACAAAGCTAATAACAATAACAATGCTCCAACTGAGGACCCTGTGTTGATCACTCCAGTTCCGAGGTTCCCTGACAAAGGAGATGACAATAACGATATGCAAATATGTTTGTCAAAGGTTTACAAAGCGGAGAAAGTTGAATTGAGTGATGATAGAATGAGTGCTGGTAGTACAAAAGGGTATAGAATGGTGAGAGCCACAAGAGGGGTGGAGGAAGGGGCGTGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACCGGGCATACTCGACTTGGATGGTCGACGGATAAAGGGGACTTGCAGGCTCCGGTGGGGTACGACGGGAACAGTTTTGGGTATAGAGATATTGATGGAAGTAAAGTGCATAAGGCTTTAAGAGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTATCGGTTTCTATATCAATTTGCCTGATGGGGCTCTGTATGCGCCCAAGCCACCTCATTTTGTTTGGTATAAGGGACAGAGGTATATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGTATGTTAGATTGCTTTACTAAATGTTGACAATTTTTGCATTCTATGTTCATTTTACTTTGAAGTGAAATAGTTTAGGTTCTGCTATATGTTCTATCATCTATGCAAGCTCTATGGAATACATTGCTACTGCATCTTGATTGTAATGTAAATAGTTCATCTGCTCTTGTACTTTTGATATGCTATGCTTTTTTTTTCTCAATTTTTAATTGATTGTCAGAGTTAGTTGGGCAAAAATGTTTCGGTTCCTAATGTTTAAAATGCCTTCAACATCTCCTAGTGTTAGCCAGTTCTGCTGGGCTATGAAACAATTGATGAGAAGAAACAAAAGTTTCGCCCATGAGGCAAGATCTCACTGGCTCGCAAGCAGGGCTGAGGTTTTTAGCAAATTTGTGCAGTTGATCTAGGATGAAAATATAGTTTTTTTATTGTTATTGTTTTATTTGAAGCTTGCTACTATAGTGACATTCGTTTTAAACTAAGGCTCCTCTAGGCATATGCTTGTGTTTCTTGACACTGACATAGTTGGGAAAATTCTTAAATGAGTTTTGGAGGGGGGAGGGTTGTGTTCTGACCATTCCTTGGTTTGCAACTTGCAAGGGAGAAACCATTTGGAAAAACAGTTTCAGAGACAGCAAAGAAAAGTGATATAAAAATAGAATGTCCAGATCAATAAGTTAAAACTCAAGATATTGTACTAAATACAAGATGCATGCTGTTTCCACCTTATTTGGAGACATCGAATGCCTGCAATTGGTTGTATTTGTAAGTGATAAAACTGAAGCCGCAATTCACTTATTCCAAGATGAATAAACACTTCAAAGTGTATCAGGCAGGGCACAAACATAAATGTCCCTGGTAGAGCAGTACATTATCTGTGAACAGGGAGAAATCACCCTCTCGTCCCAACTTTGTCTGCCGAAATCAGGCTCGAGGCTAGGATCGCCCTGTTGACCATCTATAATGTTCTGTCTTAAGGTTGAACTTGTCAACTGTGCCATTTGGGAAGTAATTTCCCCTATCACCACCGGTATGTTCACATGTTCCAAGTCGTAATATATATGGGATGGGAGAGGAGTTAGCTCATTAATAGTAGTGCAATTAAATCATAGAAGTGAAGGACTGTAAGGGGGCTGTTTGGTCAAGAGGGTGTAGTGGGGTTGGCCCATTTGGTTATTTTGTCAGTAACGAAATGAAAGAAGTTGCATTGCTTTTACTTGAATTCAGTTGAGTGCTGATTTATTTTAACTTCAGCACAATTCAGTGAGTTTGGGCCCTGTCTGTTTTTTTGGGTAACATCTATTTTTGTCTAATACCCAACCATTTTCCACATTATGAGGCAACTGTCATTTTGGTTATATAGTGATTGATTGAGAATCAGGGATTAGGGAAAAATGCCCATGAAATCTGTTGTGTTTTTCATTCTCTTTTCTGTTTTATGTTTACCTAGTTCAAATCTTGATTGAAATATCATCTCCTTTATGAAGTTGCATGATGTATCCGACATTCGTTATGCAGGAAGCGAAATTTCTTTCTTCAAAAACGGAGTGTGCCAAGGGATTGCTTTTACAGATCTAAATGGAGGCCGCTATTATCCTGCAGCCTCCATGTACACTCTCCCTAATCAACCAAATTGTGTTGTCAAGTTCAACTTTGGCCCCGATTTTGAATGCTTTCCAGAGGACTTACAAGGTCGTCCTTTGCCACAACCCATGATCGCAGTACCTTACCACGGATTCGACAACCAAGTTGAGAACGGAGTTTCAAGTGAGAAAAACACATTAGTCACGAAGTAGTACCATTTTTTTTAACCACACCAACCACTTTTAGAACTACATGACTTGAATATTATATATTTTTTCAAATGTATTGTTAGCTCATGTGCATTAGGACTGATAGATGGAAGATGAGTGGTGTAAATTTTTCTAGTTACCATCAGGTGAAGAGAGCAATTTATTTGAGAGATGTGTAGAGATAGACAGTGCATAAGCCCAACATTATTTATATAATTTGCTTCTTTTTCCAGACTTCAACTTTGCATTGGTTAGTTGATTGGATAGTTAAATGATTC GAAGAAGATAAATTTGTAATATAATTTTAAGAATCTTTTTGAATTTTCGTAAGAGAGGGAGACTTCAAAAGAGTCCCCCTCTGCCCTATCTATCGAGAGTCGAGACTTCCGAGTCTAATTTCAATTCCCTTCTCCATCCGACCCTTTCATGGTTCTTCCAAATTTACCCCAAATTTCTCAAGCTTTCTGTTTACAGACACGTATGTAAACGGACCCTCAATCTTCTCCTTCCTCACTGCTCCCCAATTTTCAAACCCTATCATGGATTCCCTCCGTTCTACTTACAAAGACGAAGACGATGAAGAAGATGAGTCCGTTCGCCCTTCTGAGATCGACCCTCCTGAGCTTGCTGATCCACCAATGGATACTAACGTCAGCGGCTCCTCAACTGACCCCCAGGACGGTACCAGACAAGACCCACCTGATGCCTCTGAAGAAATATCCGAAGAGGAACCCGCCTCCGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAATGAAGACGATGATGAAGACCCACCTTCGAAAAAGCAAAAGCAATTATCTTCGCTTAACCAACCGGTGGAGGAGGATAAATCGGCATTACCCGGATCGAATTCTGCTAAAAACGACGGTTCCGCCGGTGGCAATGCTGCTCCGGTGGCCACGGCTTTGAATCCGAAGAAATCAAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACCCGGAAAGGGAAAAAGAAGAACAAAGCTAATAACAATAACAATGCTCCAACTGAGGACCCTGTGTTGATCACTCCAGTTCCGAGGTTCCCTGACAAAGGAGATGACAATAACGATATGCAAATATGTTTGTCAAAGGTTTACAAAGCGGAGAAAGTTGAATTGAGTGATGATAGAATGAGTGCTGGTAGTACAAAAGGGTATAGAATGGTGAGAGCCACAAGAGGGGTGGAGGAAGGGGCGTGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACCGGGCATACTCGACTTGGATGGTCGACGGATAAAGGGGACTTGCAGGCTCCGGTGGGGTACGACGGGAACAGTTTTGGGTATAGAGATATTGATGGAAGTAAAGTGCATAAGGCTTTAAGAGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTATCGGTTTCTATATCAATTTGCCTGATGGGGCTCTGTATGCGCCCAAGCCACCTCATTTTGTTTGGTATAAGGGACAGAGGTATATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGAAGCGAAATTTCTTTCTTCAAAAACGGAGTGTGCCAAGGGATTGCTTTTACAGATCTAAATGGAGGCCGCTATTATCCTGCAGCCTCCATGTACACTCTCCCTAATCAACCAAATTGTGTTGTCAAGTTCAACTTTGGCCCCGATTTTGAATGCTTTCCAGAGGACTTACAAGGTCGTCCTTTGCCACAACCCATGATCGCAGTACCTTACCACGGATTCGACAACCAAGTTGAGAACGGAGTTTCAAGTGAGAAAAACACATTAGTCACGAAGTAGTACCATTTTTTTTAACCACACCAACCACTTTTAGAACTACATGACTTGAATATTATATATTTTTTCAAATGTATTGTTAGCTCATGTGCATTAGGACTGATAGATGGAAGATGAGTGGTGTAAATTTTTCTAGTTACCATCAGGTGAAGAGAGCAATTTATTTGAGAGATGTGTAGAGATAGACAGTGCATAAGCCCAACATTATTTATATAATTTGCTTCTTTTTCCAGACTTCAACTTTGCATTGGTTAGTTGATTGGATAGTTAAATGATTC ATGGATTCCCTCCGTTCTACTTACAAAGACGAAGACGATGAAGAAGATGAGTCCGTTCGCCCTTCTGAGATCGACCCTCCTGAGCTTGCTGATCCACCAATGGATACTAACGTCAGCGGCTCCTCAACTGACCCCCAGGACGGTACCAGACAAGACCCACCTGATGCCTCTGAAGAAATATCCGAAGAGGAACCCGCCTCCGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAATGAAGACGATGATGAAGACCCACCTTCGAAAAAGCAAAAGCAATTATCTTCGCTTAACCAACCGGTGGAGGAGGATAAATCGGCATTACCCGGATCGAATTCTGCTAAAAACGACGGTTCCGCCGGTGGCAATGCTGCTCCGGTGGCCACGGCTTTGAATCCGAAGAAATCAAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACCCGGAAAGGGAAAAAGAAGAACAAAGCTAATAACAATAACAATGCTCCAACTGAGGACCCTGTGTTGATCACTCCAGTTCCGAGGTTCCCTGACAAAGGAGATGACAATAACGATATGCAAATATGTTTGTCAAAGGTTTACAAAGCGGAGAAAGTTGAATTGAGTGATGATAGAATGAGTGCTGGTAGTACAAAAGGGTATAGAATGGTGAGAGCCACAAGAGGGGTGGAGGAAGGGGCGTGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACCGGGCATACTCGACTTGGATGGTCGACGGATAAAGGGGACTTGCAGGCTCCGGTGGGGTACGACGGGAACAGTTTTGGGTATAGAGATATTGATGGAAGTAAAGTGCATAAGGCTTTAAGAGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTATCGGTTTCTATATCAATTTGCCTGATGGGGCTCTGTATGCGCCCAAGCCACCTCATTTTGTTTGGTATAAGGGACAGAGGTATATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGAAGCGAAATTTCTTTCTTCAAAAACGGAGTGTGCCAAGGGATTGCTTTTACAGATCTAAATGGAGGCCGCTATTATCCTGCAGCCTCCATGTACACTCTCCCTAATCAACCAAATTGTGTTGTCAAGTTCAACTTTGGCCCCGATTTTGAATGCTTTCCAGAGGACTTACAAGGTCGTCCTTTGCCACAACCCATGATCGCAGTACCTTACCACGGATTCGACAACCAAGTTGAGAACGGAGTTTCAAGTGAGAAAAACACATTAGTCACGAAGTAG MDSLRSTYKDEDDEEDESVRPSEIDPPELADPPMDTNVSGSSTDPQDGTRQDPPDASEEISEEEPASDDTEKSAKLAKSPGNEDDDEDPPSKKQKQLSSLNQPVEEDKSALPGSNSAKNDGSAGGNAAPVATALNPKKSKKKNNNVWVTKSTRKGKKKNKANNNNNAPTEDPVLITPVPRFPDKGDDNNDMQICLSKVYKAEKVELSDDRMSAGSTKGYRMVRATRGVEEGAWYFEIKVVSLGETGHTRLGWSTDKGDLQAPVGYDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDVIGFYINLPDGALYAPKPPHFVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGIAFTDLNGGRYYPAASMYTLPNQPNCVVKFNFGPDFECFPEDLQGRPLPQPMIAVPYHGFDNQVENGVSSEKNTLVTK
BLAST of CsGy1G029840.1 vs. NCBI nr
Match: XP_004139041.1 (PREDICTED: protein TRAUCO [Cucumis sativus] >KGN66500.1 hypothetical protein Csa_1G615190 [Cucumis sativus]) HSP 1 Score: 617.5 bits (1591), Expect = 3.5e-173 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. NCBI nr
Match: XP_008450408.1 (PREDICTED: protein TRAUCO [Cucumis melo]) HSP 1 Score: 612.1 bits (1577), Expect = 1.5e-171 Identity = 428/433 (98.85%), Postives = 430/433 (99.31%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. NCBI nr
Match: XP_022154374.1 (protein TRAUCO [Momordica charantia]) HSP 1 Score: 580.5 bits (1495), Expect = 4.8e-162 Identity = 411/434 (94.70%), Postives = 420/434 (96.77%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. NCBI nr
Match: XP_023516888.1 (protein TRAUCO-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 579.7 bits (1493), Expect = 8.2e-162 Identity = 410/434 (94.47%), Postives = 420/434 (96.77%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. NCBI nr
Match: XP_022988119.1 (protein TRAUCO-like [Cucurbita maxima]) HSP 1 Score: 578.9 bits (1491), Expect = 1.4e-161 Identity = 410/434 (94.47%), Postives = 421/434 (97.00%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TAIR10
Match: AT1G51450.1 (TRAUCO) HSP 1 Score: 459.1 bits (1180), Expect = 2.9e-129 Identity = 209/257 (81.32%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TAIR10
Match: AT2G22010.2 (related to KPC1) HSP 1 Score: 42.7 bits (99), Expect = 6.5e-04 Identity = 47/162 (29.01%), Postives = 67/162 (41.36%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. Swiss-Prot
Match: sp|Q9C8J7|TRO_ARATH (Protein TRAUCO OS=Arabidopsis thaliana OX=3702 GN=TRO PE=1 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 5.3e-128 Identity = 209/257 (81.32%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. Swiss-Prot
Match: sp|Q9UBL3|ASH2L_HUMAN (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens OX=9606 GN=ASH2L PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.4e-40 Identity = 88/216 (40.74%), Postives = 130/216 (60.19%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. Swiss-Prot
Match: sp|Q91X20|ASH2L_MOUSE (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus OX=10090 GN=Ash2l PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.1e-40 Identity = 87/216 (40.28%), Postives = 129/216 (59.72%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. Swiss-Prot
Match: sp|Q94545|ASH2_DROME (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Drosophila melanogaster OX=7227 GN=ash2 PE=1 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 9.2e-32 Identity = 79/207 (38.16%), Postives = 116/207 (56.04%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. Swiss-Prot
Match: sp|G5EFZ3|ASH2_CAEEL (Set1/Ash2 histone methyltransferase complex subunit ash-2 OS=Caenorhabditis elegans OX=6239 GN=ash-2 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.4e-26 Identity = 72/213 (33.80%), Postives = 103/213 (48.36%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TrEMBL
Match: tr|A0A0A0LXF1|A0A0A0LXF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615190 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 2.3e-173 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TrEMBL
Match: tr|A0A1S3BPT9|A0A1S3BPT9_CUCME (protein TRAUCO OS=Cucumis melo OX=3656 GN=LOC103492020 PE=4 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 9.8e-172 Identity = 428/433 (98.85%), Postives = 430/433 (99.31%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TrEMBL
Match: tr|A0A1U8I7K0|A0A1U8I7K0_GOSHI (protein TRAUCO-like OS=Gossypium hirsutum OX=3635 GN=LOC107891419 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 2.9e-139 Identity = 232/258 (89.92%), Postives = 243/258 (94.19%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TrEMBL
Match: tr|A0A0D2SWK7|A0A0D2SWK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G127000 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 2.9e-139 Identity = 232/258 (89.92%), Postives = 243/258 (94.19%), Query Frame = 0
BLAST of CsGy1G029840.1 vs. TrEMBL
Match: tr|A0A2P5RCC7|A0A2P5RCC7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD18594 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 2.9e-139 Identity = 232/258 (89.92%), Postives = 243/258 (94.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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