CsGy1G029800.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCTTTTCCCCTACACAATTGACTTTAGGATGCTTAAACGACAATCAATAACATTAAAACTCCTCTTCTTCATAGTTTTGTAGGCAAATAGCTTCACATTTATTTGCAAACTTAAACATGAAACATGGTTTCTACCTCAAACTATTCCTTTCCAGAAAGTCTTTCTTTAATGAAAACATACCCTTTAATTTAGGATTAAGCTTTCTTCTATAATGGCCTTTTGTAAATCTTATTAATCTTTATTCCATCTTGCTATGTAAATTCATACCCTTTTCTTCAAACTCCTTTCATCTTGTTCTTCAACATGTCTTCTCCACTATCAATGAACTCCACCATAGCAAAGTTTCGAACCAAACTTTCTTCAATATCTCAAGGAGATGTTTGCAAAGTTTTGGCATTCTTAGGACTAACCTTGTTTATGATCTATGTTTTCATCTTTTCACCTCCAAACTACCAACCATCTGATCTTCTTACAACCCTCAAACAAAAATTTCCAATAATCAACACTTCTCCATTGTCAACATCTCTGTCGCTCACCGATCCTCCAACTAATGCCTCCCACATTATGTTCAGCATCGTTGGGTCAATGAACACATGGAAGTACAAGAGATATTATAGCGAGTCATGGTGGCGACCCAATGTAACTCGTGGCCATGTCTTCTTGGATCGATCACCTTCTGCCGAGTTCCTTCCATGGTCGGATTCCTCTGCTCCATTTCGAGTCAACGAAGATATCAGAGGCTTTGCAGTGTACCCAAGAATCAAATGGCCAGATCAGGTTGGTTAAGCTAACATTTACTGAAAAGCTTATGCCTACTCATATTATAACATACTTAATAATATTGAGTAAATTAGGAATTTAATTGTACGTAACTATTTAGTTATAAAGTTTTAGAAGTACTTTTAATTAGCTCTTTAATTTGCTAATACATTTATAATTTGTTAAATCTTCTATTATGTGTCCAATAAGTACCTTTTTTTACTTATTAACCTTGTTAGTACGTGGTCTGTTACTTGCGTAGATAAACTACTATGTTATTTGAGATATTACTTGAAATTAGTCTATTGCATGAACCAAACATAATAATCTATTATTTCTTTTGAAAGTACAGAGATAAAATAGGTTGTACCTTCAAAGTTGTGAGAGACTAAATATGTATAAACATCTAAAAGTTATAACTCATGAATTGATCAGCTTTCTATGTTTTTATTTAACGTATCACAAAGGCTTAATTAATTTGATAATTTGCACTGTATTATACTTCATACAGGTGAGGATTTTTCGAACGGTGATGGAGTCATTTAGAGAAGGTGACAAAGACACGAGATGGTTCGTAATGACAGATGACGATACAATAATATTTGTAGATAATTTAGTGAAGACATTAGGAAAGTATGATCACAAGAAACATTGGTACATTGGGATGAATTCAGAGTGTGTGAAGTCAAACTTCGATTTCTCCTTTGATATGGCTTTTGGAGGAGCTGGTTATGCTTTGAGTTACCCACTTGCTGCTTTGGTAGCAAAAAGGTTGGATGGTTGCATTGAGAGATATCCCCATTTAAGGGTTAGTGATCAAATGTTGTTCTTCTGTTTGTCTGATTTGGGATTCACTATTACTCATGAAATGGGGTTTCATCAGGTAACTCATATTATATTATTACCTCTAATAATTGCATTTTATTGTTTTATTTCGGTAAGTTTGTAAAAATAAAAAAAAAAATTATGATAATATAGTTCATGTCACTCACATTTTCAAAATTACAAAAATAACAAATTTAAAAACAGATTATCATCATATTTCTGGTCATTGTCATATTTGTCAAATTTACAATATATGTAAGAAAGAGGTGCTATGAACGGGTTTTTAAAAAAAAATTTTTTTTGTTATGTTAGCAATTTTTCTTTATTATTTGCATTCTATTACTTTTTTAGAAAATCAAGTTGAATGTTAAAGAAAACACTGCTTTTAAAAGGCAGTCGTTATTGTTTTTAGAACAAAATTAATGCATGTTAATTTCTTCAAGAAATGGGAAACTATTGCTTGACATTTACGAGAATATAAAATATATTTTTCAACTGGTTTCGTACTTTAAAACTAAAAATTAGTTTAGGTTATCTTTTTGGTTTCCCCACACACACATATATTTGTGTATTTAATATATTTCAACTTACCATTATGAATGTCAGAATGTGTACTATAAAACAAAATGTTTGTCATCGGCATGAAACTAATTTAGGGATACTATTCATTATAGTTTTTCGAGTTCTTCATTATTTTTGCGTAATCATCACCATTTTTTATATTAGAGCACACGTTGCTTGATGTCTTAACTTCTTTAAAGGTGAAATTCAAACATATAATTCTTTGTGTGCATGATTTTGACAGATTGATCTACGAGGTGATGCATCAGGTTATCTATCATACCATCCACAAACCCCCCTCCTCTCCCTCCATCACATAGACCTAATCAATCCCATCTATCCAAACATGGACCGTCCCGCGGCGATCAGACATTTGATGAAAGCGGGAGCGGTCGACCAGTCCCGACTACTTCAACAAACGATATGCTACCACCGTCCCTTAAATTGGACATTTTCAATGTCATGGGGTTACTCAGCCACATCTATGAGGCCATAATGTCTAGAAATTATTTGAAGAGACCATTGGAGACATTTGCACCATTTGAAAGAACTCATGCTCCCGTTTTCATGTTCAACACAAGGTGGGGAGTTCTTGATAACCCATGTGAAGCTCCTCATGTGTTGTTTTTTGAGTCCATTGAAAGAGATGGAGAAGATAGGATTGTTACTACTTATTTGAGGAAATGGGCACGTAATCTCCCTCCTTGTGCTTTTTCTGGCAACCACTCTGCTGAATCCATTTCCAAGATTAGGGTTTTTTCTTCTGCCAAGATCCCTTTAGAGGTTTGCCTTTCACTTTCTCATTTTCTTCTGTTTCTATCCATGGTTAAAAGCAACTTTAAACTTTTGGATTGCTTGATCATATAGAGCTGCTTCCAGATGACATTAGAGAGGCTAAAAGCAATTATAAAATTAAAATTGAAGTTAACCTTTTGAACTGTTTGTTGAGAAGGTTAATCTATCACACATTATTAATAGGTCAAACAATGTTGTAACAAGATCAATAACAATGTGAACAAACAGTAGAGACAAGAGACAATAATAAAGACACGTAAGAATTGATAATCCAAATCAGTGCAATACCTTCTTCGTCTGAGGAAGGGTGTGCCCGATGAAAGAAACTTCAGTACAATAAAGTAAAGCAATTACAACAAACATCTACAAAGACTAACAAACAACCCAGCTTTCAAAGAATAATGCTAATTTAGACTCCCTCTATACGTGAGACTTCCTCTCAAACATTCTCTTTTATCTTTCCTTACTTCATAAGAAAAACCTTTCAAATGAGAAACTTAGCCTCTCCCTGAATGTGAGAATTACCCACTAAAAGTTGGCTTTATATCAAGATGATATACGAAGAATACACCTTTTGTCTATTAATAGATAAACAAGCCTCTCATACGATCCACGTAAATTAAAATACAGAAGAGTGACCAATCAAAGCATGACCACATATATATAGTGAAAATATACACATCACTTACACAAACACTCACAAAAAAACCCACATGAAAACAATTGTTCAATAAGCAACATCCCTAAACCAATTGTTCAATGAACGATTATTGTTTCAGGAGTAACATAAAGCTATAAAAAGAATCTACACAGAACAAAAAATTTTAAAGACACCAACTGCGTGGACGTTGTTGAAGTAACAATTTACGGTGTGTTTGAATAATTATATTTTCAAGTGTTTAATTTAAAAAATAAGTTATTTAAAAAAAAAATTAAAGCGTTTAAAAGCTATTCAAAACTATTTTTCTAAACGTATTTTAAACAATTTTCACAAAAATGAGTTTAAACAAATATGAATATCTTGAACAACATATTTTTCTCAAGTCAATCTAAACAACCGTTCGTCTTTTACTTTAATACGTAGCAATTTAGTTTGACAAACACATAATTAGGAAATGTTAGACTTACTCAAGTCATGCTCAATTATTTGCAGGCAGGAGGAGCAGAGTGTTGTGATGTAAGAATGTTGGACGCCAATGTTACTGAAGTGAATTATAGACCTTGTTATAGTGGGGAAGTCATGGCTTAAATCCTTTATATATATATGTGTGTGTGTGTATGGCCTCTCTTTCTTTTGTTGGCTATGAGAGTTTTAACTTTAGCAAAGATATTGTTTCAAATTTAGATGGCAAAAACTGAGTATTATTTTACCAAACTGTTTTGATATAGTCAATAATAATTAAGTTCAATTTATAATAATTATAGTGGAAATTCAACAAACATATTTTTGACTCAATTTTGTGTATATGTATATTATATGTTATATATGTTTTTGTCCATCTTTATGTATGTGATATGGCA CTCCCTTTTCCCCTACACAATTGACTTTAGGATGCTTAAACGACAATCAATAACATTAAAACTCCTCTTCTTCATAGTTTTGTAGGCAAATAGCTTCACATTTATTTGCAAACTTAAACATGAAACATGGTTTCTACCTCAAACTATTCCTTTCCAGAAAGTCTTTCTTTAATGAAAACATACCCTTTAATTTAGGATTAAGCTTTCTTCTATAATGGCCTTTTGTAAATCTTATTAATCTTTATTCCATCTTGCTATGTAAATTCATACCCTTTTCTTCAAACTCCTTTCATCTTGTTCTTCAACATGTCTTCTCCACTATCAATGAACTCCACCATAGCAAAGTTTCGAACCAAACTTTCTTCAATATCTCAAGGAGATGTTTGCAAAGTTTTGGCATTCTTAGGACTAACCTTGTTTATGATCTATGTTTTCATCTTTTCACCTCCAAACTACCAACCATCTGATCTTCTTACAACCCTCAAACAAAAATTTCCAATAATCAACACTTCTCCATTGTCAACATCTCTGTCGCTCACCGATCCTCCAACTAATGCCTCCCACATTATGTTCAGCATCGTTGGGTCAATGAACACATGGAAGTACAAGAGATATTATAGCGAGTCATGGTGGCGACCCAATGTAACTCGTGGCCATGTCTTCTTGGATCGATCACCTTCTGCCGAGTTCCTTCCATGGTCGGATTCCTCTGCTCCATTTCGAGTCAACGAAGATATCAGAGGCTTTGCAGTGTACCCAAGAATCAAATGGCCAGATCAGGTGAGGATTTTTCGAACGGTGATGGAGTCATTTAGAGAAGGTGACAAAGACACGAGATGGTTCGTAATGACAGATGACGATACAATAATATTTGTAGATAATTTAGTGAAGACATTAGGAAAGTATGATCACAAGAAACATTGGTACATTGGGATGAATTCAGAGTGTGTGAAGTCAAACTTCGATTTCTCCTTTGATATGGCTTTTGGAGGAGCTGGTTATGCTTTGAGTTACCCACTTGCTGCTTTGGTAGCAAAAAGGTTGGATGGTTGCATTGAGAGATATCCCCATTTAAGGGTTAGTGATCAAATGTTGTTCTTCTGTTTGTCTGATTTGGGATTCACTATTACTCATGAAATGGGGTTTCATCAGATTGATCTACGAGGTGATGCATCAGGTTATCTATCATACCATCCACAAACCCCCCTCCTCTCCCTCCATCACATAGACCTAATCAATCCCATCTATCCAAACATGGACCGTCCCGCGGCGATCAGACATTTGATGAAAGCGGGAGCGGTCGACCAGTCCCGACTACTTCAACAAACGATATGCTACCACCGTCCCTTAAATTGGACATTTTCAATGTCATGGGGTTACTCAGCCACATCTATGAGGCCATAATGTCTAGAAATTATTTGAAGAGACCATTGGAGACATTTGCACCATTTGAAAGAACTCATGCTCCCGTTTTCATGTTCAACACAAGGTGGGGAGTTCTTGATAACCCATGTGAAGCTCCTCATGTGTTGTTTTTTGAGTCCATTGAAAGAGATGGAGAAGATAGGATTGTTACTACTTATTTGAGGAAATGGGCACGTAATCTCCCTCCTTGTGCTTTTTCTGGCAACCACTCTGCTGAATCCATTTCCAAGATTAGGGTTTTTTCTTCTGCCAAGATCCCTTTAGAGGCAGGAGGAGCAGAGTGTTGTGATGTAAGAATGTTGGACGCCAATGTTACTGAAGTGAATTATAGACCTTGTTATAGTGGGGAAGTCATGGCTTAAATCCTTTATATATATATGTGTGTGTGTGTATGGCCTCTCTTTCTTTTGTTGGCTATGAGAGTTTTAACTTTAGCAAAGATATTGTTTCAAATTTAGATGGCAAAAACTGAGTATTATTTTACCAAACTGTTTTGATATAGTCAATAATAATTAAGTTCAATTTATAATAATTATAGTGGAAATTCAACAAACATATTTTTGACTCAATTTTGTGTATATGTATATTATATGTTATATATGTTTTTGTCCATCTTTATGTATGTGATATGGCA ATGCTACCACCGTCCCTTAAATTGGACATTTTCAATGTCATGGGGTTACTCAGCCACATCTATGAGGCCATAATGTCTAGAAATTATTTGAAGAGACCATTGGAGACATTTGCACCATTTGAAAGAACTCATGCTCCCGTTTTCATGTTCAACACAAGGTGGGGAGTTCTTGATAACCCATGTGAAGCTCCTCATGTGTTGTTTTTTGAGTCCATTGAAAGAGATGGAGAAGATAGGATTGTTACTACTTATTTGAGGAAATGGGCACGTAATCTCCCTCCTTGTGCTTTTTCTGGCAACCACTCTGCTGAATCCATTTCCAAGATTAGGGTTTTTTCTTCTGCCAAGATCCCTTTAGAGGCAGGAGGAGCAGAGTGTTGTGATGTAAGAATGTTGGACGCCAATGTTACTGAAGTGAATTATAGACCTTGTTATAGTGGGGAAGTCATGGCTTAA MLPPSLKLDIFNVMGLLSHIYEAIMSRNYLKRPLETFAPFERTHAPVFMFNTRWGVLDNPCEAPHVLFFESIERDGEDRIVTTYLRKWARNLPPCAFSGNHSAESISKIRVFSSAKIPLEAGGAECCDVRMLDANVTEVNYRPCYSGEVMA
BLAST of CsGy1G029800.1 vs. NCBI nr
Match: XP_004139115.1 (PREDICTED: uncharacterized protein LOC101213989 [Cucumis sativus] >KGN66496.1 hypothetical protein Csa_1G615150 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 9.4e-73 Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. NCBI nr
Match: XP_008450413.1 (PREDICTED: uncharacterized protein LOC103492025 [Cucumis melo]) HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72 Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. NCBI nr
Match: XP_022933482.1 (uncharacterized protein LOC111440887 [Cucurbita moschata]) HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67 Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. NCBI nr
Match: XP_023530356.1 (uncharacterized protein LOC111792955 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262.3 bits (669), Expect = 1.0e-66 Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. NCBI nr
Match: XP_023530357.1 (uncharacterized protein LOC111792956 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.2 bits (666), Expect = 2.2e-66 Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TAIR10
Match: AT5G12460.1 (Protein of unknown function (DUF604)) HSP 1 Score: 117.9 bits (294), Expect = 5.6e-27 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TrEMBL
Match: tr|A0A0A0M2U4|A0A0A0M2U4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615150 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 6.2e-73 Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TrEMBL
Match: tr|A0A1S3BPU4|A0A1S3BPU4_CUCME (uncharacterized protein LOC103492025 OS=Cucumis melo OX=3656 GN=LOC103492025 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.1e-72 Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TrEMBL
Match: tr|W9RTJ7|W9RTJ7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015317 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.7e-39 Identity = 78/139 (56.12%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TrEMBL
Match: tr|A0A2P4MLG5|A0A2P4MLG5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37881 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-37 Identity = 80/136 (58.82%), Postives = 100/136 (73.53%), Query Frame = 0
BLAST of CsGy1G029800.1 vs. TrEMBL
Match: tr|A0A2P4MLH2|A0A2P4MLH2_QUESU (Glycoprotein-n-acetylgalactosamine 3-beta-galactosyltransferase 1-a OS=Quercus suber OX=58331 GN=CFP56_37880 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 8.0e-36 Identity = 77/139 (55.40%), Postives = 100/139 (71.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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