CsGy1G029790.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACAAACGATCTTGGGTGTGCTCACAATCTTGAAGCTTACCTACACTTAATCGATGGGTACCACGGTAAGGGGCGAAAGTTTCGACTAGAGACAAAGAGAGACATAGCTTTAGTGAACAAGAGTTGTGACTTTTTGAGAAAGGAGTACGGTGTGCCACCGTGTTGGCGACAAGACGAAAATAAAGGGATGGTTAGAAACAATGAAGGGCGGTGGGTGGTGCCAGATAGACCGAGGCTAGAGGATCATCCGCCCGATACTGCACACCACCTTCAACAAGTGCTCAAAGATGTTTTTGGTTCATAG ATGTCGACAAACGATCTTGGGTGTGCTCACAATCTTGAAGCTTACCTACACTTAATCGATGGGTACCACGGTAAGGGGCGAAAGTTTCGACTAGAGACAAAGAGAGACATAGCTTTAGTGAACAAGAGTTGTGACTTTTTGAGAAAGGAGTACGGTGTGCCACCGTGTTGGCGACAAGACGAAAATAAAGGGATGGTTAGAAACAATGAAGGGCGGTGGGTGGTGCCAGATAGACCGAGGCTAGAGGATCATCCGCCCGATACTGCACACCACCTTCAACAAGTGCTCAAAGATGTTTTTGGTTCATAG ATGTCGACAAACGATCTTGGGTGTGCTCACAATCTTGAAGCTTACCTACACTTAATCGATGGGTACCACGGTAAGGGGCGAAAGTTTCGACTAGAGACAAAGAGAGACATAGCTTTAGTGAACAAGAGTTGTGACTTTTTGAGAAAGGAGTACGGTGTGCCACCGTGTTGGCGACAAGACGAAAATAAAGGGATGGTTAGAAACAATGAAGGGCGGTGGGTGGTGCCAGATAGACCGAGGCTAGAGGATCATCCGCCCGATACTGCACACCACCTTCAACAAGTGCTCAAAGATGTTTTTGGTTCATAG MSTNDLGCAHNLEAYLHLIDGYHGKGRKFRLETKRDIALVNKSCDFLRKEYGVPPCWRQDENKGMVRNNEGRWVVPDRPRLEDHPPDTAHHLQQVLKDVFGS
BLAST of CsGy1G029790.1 vs. NCBI nr
Match: XP_011660136.1 (PREDICTED: phospholipase A1-Igamma3, chloroplastic [Cucumis sativus] >KGN66495.1 hypothetical protein Csa_1G614650 [Cucumis sativus]) HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. NCBI nr
Match: XP_008450415.1 (PREDICTED: phospholipase A1-Igamma3, chloroplastic [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 1.5e-53 Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. NCBI nr
Match: XP_022154317.1 (phospholipase A1-Igamma3, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47 Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. NCBI nr
Match: XP_022154316.1 (phospholipase A1-Igamma3, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47 Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. NCBI nr
Match: XP_018830942.1 (PREDICTED: phospholipase A1-Igamma3, chloroplastic-like [Juglans regia]) HSP 1 Score: 184.1 bits (466), Expect = 2.4e-43 Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TAIR10
Match: AT1G51440.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-40 Identity = 76/102 (74.51%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TAIR10
Match: AT2G30550.2 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 128.3 bits (321), Expect = 2.8e-30 Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TAIR10
Match: AT1G06800.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 124.8 bits (312), Expect = 3.1e-29 Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TAIR10
Match: AT1G30370.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 83.6 bits (205), Expect = 7.9e-17 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TAIR10
Match: AT2G42690.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 83.6 bits (205), Expect = 7.9e-17 Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. Swiss-Prot
Match: sp|Q9C8J6|PLA17_ARATH (Phospholipase A1-Igamma3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g51440 PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 3.1e-39 Identity = 76/102 (74.51%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. Swiss-Prot
Match: sp|Q3EBR6|PLA16_ARATH (Phospholipase A1-Igamma2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g30550 PE=1 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 5.0e-29 Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. Swiss-Prot
Match: sp|Q941F1|PLA15_ARATH (Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06800 PE=1 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 5.6e-28 Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. Swiss-Prot
Match: sp|Q9SJI7|PLA20_ARATH (Phospholipase A1-IIdelta OS=Arabidopsis thaliana OX=3702 GN=At2g42690 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15 Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. Swiss-Prot
Match: sp|A2WTA0|PLA3_ORYSI (Phospholipase A1-II 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_03088 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14 Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TrEMBL
Match: tr|A0A0A0LXE2|A0A0A0LXE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614650 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TrEMBL
Match: tr|A0A1S3BNJ8|A0A1S3BNJ8_CUCME (phospholipase A1-Igamma3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492026 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 9.7e-54 Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TrEMBL
Match: tr|A0A2I4FH25|A0A2I4FH25_9ROSI (phospholipase A1-Igamma3, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108998721 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43 Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TrEMBL
Match: tr|A0A067JRF6|A0A067JRF6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25940 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43 Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of CsGy1G029790.1 vs. TrEMBL
Match: tr|B9RIE5|B9RIE5_RICCO (Triacylglycerol lipase, putative OS=Ricinus communis OX=3988 GN=RCOM_1578410 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.5e-43 Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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