CsGy1G029690.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGACAAGATGGTGAAATGGCAGAAGTTGATTGGTTGTGATGAAGAGAAGGGGGCGATGCTTGTTGGTGTTTGTTGGTGGTGAGAAAAGAGGGTTGAAAGTGAAGAAATTCAATTCATTAACTTTATTTTTTCTATCATTTCCTCATTAAGCTTTCACGAGCGTTCCCCAATTTTTCTTCTTCGCAAACAAAACGCACCCACGGGGGCGAAGTAGCAACGGGAACAAATCAAAATTTCCCCTTTTTTCTTCATTTTTAATCAAATCGGTTTGTGAGATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGGTTTGCCTTCTTTGCTGTCCTTTTTTTTTCCCTCTAACATCTTCATTTCTCCTCTAATTTTTTTGTTTTCTGATCTGGGTTTTTCTTGCCTTCAAGAGAGAACATTGCTTTCAGTGTGATTATTTGTTTGATTCTACCATGACCCAATTGCCGTATCCTTGCCATATGGACATTTGATGTGTTTTTGGACATGTTCTATGAATCTCTCTTTTGGATTCTTATATTTGCCTTTTTGCTTTTCCGAGAAATGATTGATGGACGTAAAGTTTTCATAATCTGAAATGGGTGGTGGCGTGTGATTGGAGGATTCATTAACTCTACCATCTATTTCCAAGATCGTGCTAGCGAGCATCCATTGTTTTGGTTCCTTATTGAAGAAAATAAAGGAAAAGGGAGTGATTAATGTGAATGAACTGCAAAAGGGTTTTTGTAGTTTCTCAGTTTTGCAGCTTTGTAGTGTAGGTAGATGAGCAACTAGAAGTTCAAATTGTAAAAGTAAAATAGCCTGGGCTTCAATGGATCGGATTTACATTCTCCCATGTGGGCGTTGTTAATTGTTATTTTATGGTTTGAATGTAGAAAAAGTGTGACTTATGAGGTTCCATCACTCTGAATCAATTTGCAGTTTGAGCGTAGTTTTATGTTTTAGTTACGAGAAATGAATTGTAATTTAATCGTAATTTAGCAACAAGCAACAATATGATATGATTGTGCTGAAAGCGGCCATTATTTTTTTACAACGTGGGGTGTTTGGGGATCCATAATAGGATTGGTTTGTCATGTAATGTGATCCAAATCCCATGTTTAGATTAATCCGACAATTTTTAAGCCAACCTCTTTCTCACCGTTTTCATGCTTTACAATCTCATTTTCATTCCATCTTCTACCGCTAACATTTTCCAGCACTCCTCTAATTTCTACTAACCCTGATGACATTCTAGCTCCCCAAATAGCCCTTGATTCTTCTTAGTTTCCTTAGATGGATGAGAAACGTCTTAAATTACAGTGTGATGGTTATTAGGAAGTGAGTTCTTGAGTTAAAAGAGAGGGTAAGGTTAAAATGTGTGCGTTTTTGTTTCTAATAAGTTCTATTATCTCTGTAACGCTATGAGTTTAGGAGATAGTTTAGGGGAGGTTCATGAATGAAATCGATATCACCTCTGAATGAGAGAGATTCTGAAGACATGAAAGTAAGGTTGAGAAATGCTTAAAAGAATTAAAAATTACTACCTATACCAACAAGGTGCACCTCCCTTTTCGGTGACTCAATCAGAAGAACTCCAAGGTTAAGCGTGCTTAGGTTGGAACAATTCTATGTTAGGTGACCTCCTGAAAATTTTCCTCAAATGCATGTAAGTGAGGACAAAGCATGCTGAAAGAATCCGTGTAGGTTCGTGGGAAAAATTTTCAAAAGCCCTTAAGACAAGTAAGGATGATGTTTTTTACAACCTCTATCTTGTGCGTTTTTGTATTGGATTTTTCTGCCTTTTGGCTATCAATCACCAAATAACTATCTCCAACATTATGCTGAGTAAATAATCTTTGTGTGACTATCTGAGTATGATAAGGATTGGGGATGGTTTTGTTTATTTTTCTGAATTTTAACTTTCCGCGTCGCTGCAGGTCATGAATTGGTTGTTGGTGTCTACTTTTTTTTTCTTCTTTTAAATCAGTTTTCTAAATTTTTTTATTTCATTTTATCTGTCGCTGTTATCTCATCGTGGTTATCCTCACATGTATACTTTTACTTTTCAGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTTACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGTGCGGATTTTTTTTATGCATTATGTATTTCTTTTAAAGTTGGAGGTCTCATCCCTTTTCTCTTAAAAAAAAAAAAGAAACTAGCTTTCATAAGGAAAAAGCCCACAAAGGGCCTCCGATCATGTAAAACAATCCCTATTTAATAATTATGAGAAATCTTGATAACTAAAGTAAGAATGGGAACATGAAATCTAGCCAGGGACCATACACCCATCATATCCCTTTTCAAGCCTCTAAACACTATTGTTACTCTCCCTCAAAGATCCTCATATAATGCACCCACACCAACAAGCCACGCTTCTCTCTTAAATAGATGATATTCTTGCTGATATGGATGTGTTTATAAATTCAGCCTCCTTAATGCAAATCTAAGCAATTGAGCAAGAAAGTTAATTACCAACCTGTTTCATAATTTAGTTTAATATCGTATATTCATATTCTCCGACCATTTTCCAGGTTCTGAATGTGCAACTCACTCTTGCAGGATCAGGTGTTCTCTGAACAGGATGCCTTTTTTGCTTGGACATTTGTTAAGCGGAGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATGTAGGTCATACAGCCCTTTTCACTGCCTTATTTTTGTGTTGTTCTTTTATATATCGATAAGTCATTCATATGCCCTTGTATTATTTCATTTTTTTCTCAATGAAGCAATTGTTTCTACCCAAATAAATCATTCATATAGTTTTGTTAATAACTTAATTTTGGGAGTGCTGCATCTGAAGCATTATGGTAGGATGCTATCAAAATTTTTTTAATGTGTCTACTTTTATTGGCTATGTTTAAGTTATAAATATGTCTGCTTTTATCGGCTACGTTTAAGTTATAAATGTGTCTACTTTTATTGGCTATGTTGGTTGACCTTTCTCTCTCTTTTTTATTTTTATTTTTATTTTTAAATTTTTAAATATTGTGAGTGATTGAGTGAGGTTTATGTGCACCTCGGCTATGAACTTTTTCTCCTTTTTTTAGTCAACATTTTTTTGGTCCTTTTCTAGAAGTAGTGTATGGGGAGAGCATAATTTCGTTTCATATTTTTATTTATTATTATTTTAAAAATAAGAAGGGCGGAGCACAAATCTTTTGACCTCCTTAAGTTGTTCCTTTAAGGATTGGACAACATCATAAAGTAATAATTGTTGGATAGCTTGGGTGGCAAAGTCAGCGAATGATTGCAACTCTTTCTAAATTCTTGATTGTTATTTGTGGTAGCTTGGTTGGTCTTGGTTGATTTGTTGATTTATTGTGGTTCTTCTTTGTACGTATACATTAACATTCACTTCGCTAGCACAATAAAAGGTTCTCTATTATTTTAGGGGTTCCCAATTGGCTTGAGCATTAGTAAAGTAATTCATGTTTTGAATTGCTCAACTGCTCAAGTAAATTGGAACTTCTGTAGCCTTTACTATCACTTTGTGGTTCTTATCAAAATGGCTTAGAAACTTTTATATATGACACCAATTGTTGCATTGATGAATTAAACATCAGCATACCTTTGAAATGCTTATGCTGCATCTTATGCTTTCGTTTAAATTTGTAGTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGGTTTGTGTCATACTCATACCTTTCTGAAATTTTATACAACTGAAGATAGAGTAGAGAAGTCTATAACAACAATCTATTAAGAACCGGCCTAGCAGGTTAGAATGTGGATCGGTTGCACATCGGTGTAGCATAAGAAAACAATTTGACAGCCAAATGTTATCTGACTTGAAAGTTTTCTGTTATGTATGGGCATCTGCTCCATTTAATTTCTCACTTGCTTTCTGTTCTTGTCATGAACTGCGTTGGCCAATGCAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAGGCCTGTGAATCTTTTGAGGAAGAGAAGAACCATGATAAACGTGTTCCTATATGAGCTTTGTTTAATTATTATTTTTTGTTTTAAAAAACAGTTGGTTTTTGTTACTTATAACCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCTAAACTAAAGTGAGCTTTTCTTACTAAATTCCTTCTCGATTTACACCAAAAATCATCTGTGAGTTGTGTCATGTACATGTAAAACTTTTCTTTGAAATGCTTCCTTCCAATCAAGTCACCTCTTTTTTTTGTGGCAGTCGTTTTCAGTGTTCGTTAGAAGTTTCTTCAACCTTGCCTGATTTCGATCGTTCCTTGCTGAGTTTTTCTTCTGTGAACCTGTCTTTCCATATCCTTGGCTTGTAATTTTGTCATTGTCCAGATTTATACAACTCTCCCAACCTCTCTTCAGGTTTCACTCATACAGCACTCGTAGGAGGCAATTCTCTTTTTGATGGATGAGGTTTTGGGAATAAGAAACATCAAACAATTTTTTGGTGAAGCTTGTTGTTTCCATGAAGTTTCTTCTCACAGGATCTAAAATGTGAGGGATAGAACTTTCAACGATCTATAGAACTCAAGAACATAGTTGTACAATCTATAAAATAGATCCTATTTAAGTAAAGGCATGATAAAACTTATGATATGATGGAACAAGATAGCATATGCTATGTCGTAGGTTAACACTAGTAAACTTGTAATTGGATCAATTTGATTATCCCAATTTGATTAGAAGTGATAATTTAGTTCATAAGTTTGAAGTTAGTAGT AGGACAAGATGGTGAAATGGCAGAAGTTGATTGGTTGTGATGAAGAGAAGGGGGCGATGCTTGTTGGTGTTTGTTGGTGGTGAGAAAAGAGGGTTGAAAGTGAAGAAATTCAATTCATTAACTTTATTTTTTCTATCATTTCCTCATTAAGCTTTCACGAGCGTTCCCCAATTTTTCTTCTTCGCAAACAAAACGCACCCACGGGGGCGAAGTAGCAACGGGAACAAATCAAAATTTCCCCTTTTTTCTTCATTTTTAATCAAATCGGTTTGTGAGATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTTACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAGGCCTGTGAATCTTTTGAGGAAGAGAAGAACCATGATAAACGTGTTCCTATATGAGCTTTGTTTAATTATTATTTTTTGTTTTAAAAAACAGTTGGTTTTTGTTACTTATAACCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCTAAACTAAAGTGAGCTTTTCTTACTAAATTCCTTCTCGATTTACACCAAAAATCATCTGTGAGTTGTGTCATGTACATGTAAAACTTTTCTTTGAAATGCTTCCTTCCAATCAAGTCACCTCTTTTTTTTGTGGCAGTCGTTTTCAGTGTTCGTTAGAAGTTTCTTCAACCTTGCCTGATTTCGATCGTTCCTTGCTGAGTTTTTCTTCTGTGAACCTGTCTTTCCATATCCTTGGCTTGTAATTTTGTCATTGTCCAGATTTATACAACTCTCCCAACCTCTCTTCAGGTTTCACTCATACAGCACTCGTAGGAGGCAATTCTCTTTTTGATGGATGAGGTTTTGGGAATAAGAAACATCAAACAATTTTTTGGTGAAGCTTGTTGTTTCCATGAAGTTTCTTCTCACAGGATCTAAAATGTGAGGGATAGAACTTTCAACGATCTATAGAACTCAAGAACATAGTTGTACAATCTATAAAATAGATCCTATTTAAGTAAAGGCATGATAAAACTTATGATATGATGGAACAAGATAGCATATGCTATGTCGTAGGTTAACACTAGTAAACTTGTAATTGGATCAATTTGATTATCCCAATTTGATTAGAAGTGATAATTTAGTTCATAAGTTTGAAGTTAGTAGT ATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTTACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAG MRKTGGTEKKRVRRQSTAVQNAAKDPNSDTPPRKQAAKKDVFQLFSEKVRDHKDLESRWAVLQETRVEYFRGKDFVSFLRNHPELKDILDSDKNLETEDIGNALLSKNLLVRCDRVVKTVRPGKRKLSTWPAHLEIFPAILADTSFILLACVDPCNLLVSCISSSVQAFDTLLMRWVRGAVFGLSYILLGKRMWFFPNILAEEATLRELFRFWPSKDEEEKPKWTTRLFYAVVAVLIILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPRLALSGMMEKQQTVVNATNPDPNMAENPTSDSTGPDSIPDQPEPETIDYVEHSDQYNHDGDHTHQ
BLAST of CsGy1G029690.1 vs. NCBI nr
Match: XP_004139032.1 (PREDICTED: uncharacterized protein LOC101212624 [Cucumis sativus] >KGN66485.1 hypothetical protein Csa_1G613570 [Cucumis sativus]) HSP 1 Score: 500.4 bits (1287), Expect = 4.9e-138 Identity = 310/367 (84.47%), Postives = 314/367 (85.56%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. NCBI nr
Match: XP_008450425.1 (PREDICTED: uncharacterized protein LOC103492034 [Cucumis melo]) HSP 1 Score: 487.3 bits (1253), Expect = 4.3e-134 Identity = 304/367 (82.83%), Postives = 310/367 (84.47%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. NCBI nr
Match: XP_022154351.1 (uncharacterized protein LOC111021636 [Momordica charantia]) HSP 1 Score: 466.5 bits (1199), Expect = 7.8e-128 Identity = 277/367 (75.48%), Postives = 286/367 (77.93%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. NCBI nr
Match: XP_022967663.1 (uncharacterized protein LOC111467106 [Cucurbita maxima]) HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127 Identity = 274/367 (74.66%), Postives = 290/367 (79.02%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. NCBI nr
Match: XP_023530426.1 (uncharacterized protein LOC111793001 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127 Identity = 275/367 (74.93%), Postives = 290/367 (79.02%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TAIR10
Match: AT3G20920.1 (translocation protein-related) HSP 1 Score: 292.7 bits (748), Expect = 2.8e-79 Identity = 209/346 (60.40%), Postives = 242/346 (69.94%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TrEMBL
Match: tr|A0A0A0LXB3|A0A0A0LXB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613570 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 3.2e-138 Identity = 310/367 (84.47%), Postives = 314/367 (85.56%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TrEMBL
Match: tr|A0A1S3BQ77|A0A1S3BQ77_CUCME (uncharacterized protein LOC103492034 OS=Cucumis melo OX=3656 GN=LOC103492034 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 2.8e-134 Identity = 304/367 (82.83%), Postives = 310/367 (84.47%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TrEMBL
Match: tr|A0A2N9GNN6|A0A2N9GNN6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28985 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 8.6e-99 Identity = 238/368 (64.67%), Postives = 269/368 (73.10%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TrEMBL
Match: tr|A0A2I4FH24|A0A2I4FH24_9ROSI (uncharacterized protein LOC108998739 OS=Juglans regia OX=51240 GN=LOC108998739 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97 Identity = 216/368 (58.70%), Postives = 241/368 (65.49%), Query Frame = 0
BLAST of CsGy1G029690.1 vs. TrEMBL
Match: tr|A0A2P4KYF1|A0A2P4KYF1_QUESU (Translocation protein sec62 OS=Quercus suber OX=58331 GN=CFP56_45417 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 8.0e-97 Identity = 244/367 (66.49%), Postives = 273/367 (74.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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