CsGy1G029510.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGGGTTATCTTATTATTATGTTCAAACTATTTAAATGTTATATTTGTAGGTTTTTGCATCCTTTGGTGTATGGAGATTATCCAGCCAGCATGAGACATCTTGTGAACAAGAGATTGCCTAAATTCAAAGATGATGAAATTCTTTTGGTGAAAGGGTCTTATGATTTTATTGGAATAAATTACTATACAGCTAATTATGCAAAGAATAATCCCAATGTTGATCCTCACAAACCAAGTCTAGTGACTGATCCCCATGCTGATGTTTCAAGTATGCATTGTTTAATTACATCAAAATCGTGTTATATATCTTTTACTTTTACATTTCTTTTTCTCATACACATTTAAATTTCTCTAATTTGACTTTGCCCATTTGTTTTTCTGAATTGTAGCTGATCGAGATGGAGTTCCAATTGGTCCGAAGGTAATCAATATTATTTAAAATATATTCATTTGTTTGGTTTTACGTTTTTAAATTTAAATTAGTTGTATGTCATATTTCTTTTCGTAAAAATATCCATTCAAACCTCAAACTAATAGTTATATCACATTAATCCTTGAACTTTCATAAATGCATTAATCTAAATCCTCTAATGATATGAAAGCGATAGAAGAACAAGAAAAACTCAAATAAAAAGTATAATATCTATGCTTGATTTTGTAGGTGAGTAAAGATTCTTGGCTTGCAGTTTATCCACAAGGATTGAAAGATCTTATGATACATATAAAGAACCATTACAGAGATCCACACATCCTCATTACAGAAAATGGTATTTTAACTTACTTTTCTAATTTTACTATATATGTACGTACACACCTGTTTGATATTTATATTAATCTTATTTAATTATTTCATTAATTGACATTTTAAATACAGGATTTTTCGACTATAATTGTTCCAACATCGAGAAATTAATCAAGGATGAAGGCAGAGTTAAATACCACCAACAACATCTCACTAAACTTCACGAGTCAATAAAGTAAGTAACTAAATAAAAAAAATACTTTTAAAGATAAAATTGTTAAAAATATTAAAAACACATCACAATCTATTTATGAAAGATCGCAAATTAGACTACTATCTCTATATAGATAGACATCGAAAGTAATCTATTGCCGTTTACCGTAAATATTTTAGTTCATTTGAAAATGACCTAAATTATATTTACTATGCTCTTAGTTAATGATATATGTTGTGCAATATATTTGTAGGGCTGGAGTAAATATAAAAGGATATTTTGCATGGACATTATTGGACGATTTTGAATGGTCGAGAGGATATACTATGAGGTTTGGTATAACCTACATTGATTTCAAACACAAAACTTTGGAACGAATCCCAAAATATTCAGCAAGGTGGTTCAACCATTTCCTACGCACTTGAAGATATTCACAACCAACCCCTCGAAGCTATTTGCTAAACCCATTATAGTAAAGATCCCCTCAAAGCTATTTGCTATGGCATTATAATAAGGAATTGCAATAAAGCTTCTCAAAGCTATTTGCTACTAAGGCATTATAATAGGCATTGTAATAATAAAGCTTAGCTTCTCAAAGCTATTTGCTACTAAGGCATTGTAATAATAAAGCTTCTCAAAGCTATTTGCTCATAAAGCATTATAACAAAGCTCCTCAAAGTTATTTGCTAATGCATTATGATAAAGACCCTCATAGCTAGTTTCTAAGGCATTATATTGTAAAGTTGTTTTGTATTTGATTTTGCATATATACTTGTTATTCTAATGTTTTGGGTCAATAAAATAAATTAGAATTGAGAATATATACACTACTTTAATTTTCCATTTCACCTTTTTTATTATCATTATTATTAGGGCTAGTTGTATAAATGACATTTAAGCCCACAACTAATAAAATATACAACATAAAAGATAAAATAAATGCATATATAACATAAAAATTGGTAAAAAATTTAAAACCCCACGTCTAACACAACAAAAATTGATAATTGTTATAAGTTGTGACTAATAGTTTCTGGCAATGAATATCATCTATTGTTGCTATTAGTGATATATTTCAATTTAAGAAATGTGCTATCAATTGTCATCACTGTAGTTGTTATCAATTCTTGTGTAATTAATGTAATTAGTCTAGTGTCGTGACACTTCAAAGTTGTAAACTGGAAGAACCCGTATGCATGGCCTAGCATCGCGGTGCTGCCCTAGAACGTCGCAACACCGTTATAATTTTACATTAATAATATGTTCCTAGTTGCAAGCCACTTAACGAACATTATTTACACGCCTTCTTAGACACTCTTGAGAGGATTTTTGCACACTCTTTTGTCTTGCCAATTGAAGTTTTTTTCTTGTTAACTTTCATGCTTTTAACGATGTATCAAGCCTAAGGTACCTTTTATCTAGCTTGTGTTGTTTGAGATTTCCCATTTTTTCTTTGTATTTGTGACTTTTTGAAATAGATATATTTTTATTGATCGAATCCAATTCTATTTTGAATGCTTTAATTCCAATTCCATTTCGAATTTCCATGGATATTTAGTTAGACGCTTGAAAGTTAATTATTTACTCAAACTTGCCCTTGAACTTAATGCACTCAATGTTTATCTGAATTTTGAATGATTTTCATTGGTCATATTAATGTCGATTAGTTGCTTAGGACAATTCAATTGTCTTTTTCAATCGAACTAGGTGTAATCAACATAGAAATTTGGTAATGATAAAGTATGATCAAATGCATAGAATAGGCAAAATCCAATAGACCCAAGCTAGACAATTTTGACATTAAGTCTTTACAATTTCTCGTTGTTTCATGCAATTTATTTTTTTGCAATTAAATTCAACTCAAAATCCACTCTTCAGTTACGTGGTTGCAAATTAGTTCATTTGAGCAATCAGTGTGCTCCTTGGTTCAACCCAAACTTCTCACTAAGACTAGTGTTTGGTGTGTAATTTGGTAATTTATTTGGCACAAATTTGAGCGACGAAATTTGTTTGTCAAATTAGCGACATTGTTAGGGAGGGCCTAGATTTCTCTTGTGAAAAAGTTTTTTTACTTATATATTTTTCTTTATTCTTCTCTTCCTTTGTATGACTTAATATGTAACCCCTACAAATTAAGTAAAATTGAATTTAATTATCTTAATGTTATTTGGTTATGTTGGAATTATTGGACGTTAAGTTGAAGTATTTGATTAAGAATTAATGATCTCGTGAAATTGGAATTAATTAGATATTTATTGGATGAATATTTAAATAATTAGAGAAATTAAATTTATGGTGTTTTTTGAGGATTTAATTTAATTGTATGTTACAAGGATTAAGTAAAGTTGTGGAAATTATTTGGTTTTATGAAAAATGAAATTTATTAAATAATTTAGATTTTATTTAATTAAATTGAAGAGTGAAAATTTTGTTAAAGATTTGATAATTATATGTATATATATTCATATATACATATAATTATTCTCGAAAATGAAAAGATAATTATATTTGTTAAAACATAATTATTTAGAAGGAAGATATTGTATTTTGTACAAAAGACAAAGATAAATTATTTGTGGGAGGCTAATTATTTGGAGAGAGGATATTTGTTTAGAAAAAAGAAAAAATTATATTTTGTAAAATATAATTATTTGTAAAAGTATAATTATATTTATAAAAGAATAAAGTTGATTGGATTTGGTGAGATTTAAATTAAGAAATAAACAAAATAAGTGCACACATATAACTAATTTTACTCTATATCATCTTATAGACCAATAATATATGAGTGTATATTTTCATTTTTCAACGTGTTTATAAAAAAAAACATAGTATATTTTTGAAAAATTATAGAATTTGTAGAATAAAAAAATAAAAATGAAAAAAGGTACATATATTTGTACAAAACTAAAGCAACATAAAAACATAGAAAGAAAAAAGAAAAAAAATATGTAAAAAACCATATTATAGTGACAATAAAAAATAAAATAAATTGAACTTACATGAGAAAGAAAAATAAACCAAATATATTTTAAAAAATAAAAATGTACTATCTCACATTAAAATTTAATTAAACCTAATCTCTTACCGTTAATAAATGTTCAAGATAAAATTAACAATAAATATGTAAAGTAAAATTTGAAATTAAGTAATAAGAAAATTGTTAGTATTATTATTATTTCATATTTGTGTGATTAGTGAATATTCCTCCAATTTTTTCTAAAGGAATTGTGATCTCTAAGCTATAGTAAGTCTGTTTCCATATACAAAATTATCAGTCACATGGCCGCCGTCAAGGTGTGGCCGGATTGATCGATATGTATGCAAAATGCATGGCGGCTCTCAATGTGATATTCTTCAAGCTTCTTCACTAA ATGTTAGGGTTTTTGCATCCTTTGGTGTATGGAGATTATCCAGCCAGCATGAGACATCTTGTGAACAAGAGATTGCCTAAATTCAAAGATGATGAAATTCTTTTGGTGAAAGGGTCTTATGATTTTATTGGAATAAATTACTATACAGCTAATTATGCAAAGAATAATCCCAATGTTGATCCTCACAAACCAAGTCTAGTGACTGATCCCCATGCTGATTCACATGGCCGCCGTCAAGGTGTGGCCGGATTGATCGATATGTATGCAAAATGCATGGCGGCTCTCAATGTGATATTCTTCAAGCTTCTTCACTAA ATGTTAGGGTTTTTGCATCCTTTGGTGTATGGAGATTATCCAGCCAGCATGAGACATCTTGTGAACAAGAGATTGCCTAAATTCAAAGATGATGAAATTCTTTTGGTGAAAGGGTCTTATGATTTTATTGGAATAAATTACTATACAGCTAATTATGCAAAGAATAATCCCAATGTTGATCCTCACAAACCAAGTCTAGTGACTGATCCCCATGCTGATTCACATGGCCGCCGTCAAGGTGTGGCCGGATTGATCGATATGTATGCAAAATGCATGGCGGCTCTCAATGTGATATTCTTCAAGCTTCTTCACTAA MLGFLHPLVYGDYPASMRHLVNKRLPKFKDDEILLVKGSYDFIGINYYTANYAKNNPNVDPHKPSLVTDPHADSHGRRQGVAGLIDMYAKCMAALNVIFFKLLH
BLAST of CsGy1G029510.1 vs. NCBI nr
Match: KGN66464.1 (hypothetical protein Csa_1G612880 [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. NCBI nr
Match: XP_011660115.1 (PREDICTED: beta-glucosidase 24-like [Cucumis sativus]) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. NCBI nr
Match: XP_008450452.1 (PREDICTED: beta-glucosidase 24 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. NCBI nr
Match: AFO12657.1 (beta-glucosidase, partial [Cucumis melo]) HSP 1 Score: 139.0 bits (349), Expect = 8.9e-30 Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. NCBI nr
Match: KGN66457.1 (hypothetical protein Csa_1G612320 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29 Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TAIR10
Match: AT1G51470.1 (beta glucosidase 35) HSP 1 Score: 75.5 bits (184), Expect = 2.2e-14 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TAIR10
Match: AT2G44460.1 (beta glucosidase 28) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TAIR10
Match: AT5G24540.1 (beta glucosidase 31) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-14 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TAIR10
Match: AT3G03640.1 (beta glucosidase 25) HSP 1 Score: 73.9 bits (180), Expect = 6.4e-14 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TAIR10
Match: AT3G18080.1 (B-S glucosidase 44) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. Swiss-Prot
Match: sp|Q75W17|FURH_VIBFR (Furcatin hydrolase OS=Viburnum furcatum OX=237940 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. Swiss-Prot
Match: sp|Q7XKV5|BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. Swiss-Prot
Match: sp|Q7F9K4|BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU10 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.7e-17 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. Swiss-Prot
Match: sp|B8AVF0|BGL12_ORYSI (Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.8e-16 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. Swiss-Prot
Match: sp|Q7XKV4|BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 3.8e-16 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TrEMBL
Match: tr|A0A0A0LZM1|A0A0A0LZM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G612880 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35 Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TrEMBL
Match: tr|A0A1S3BP84|A0A1S3BP84_CUCME (beta-glucosidase 24 OS=Cucumis melo OX=3656 GN=LOC103492048 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TrEMBL
Match: tr|K9LQU3|K9LQU3_CUCME (Beta-glucosidase (Fragment) OS=Cucumis melo OX=3656 GN=BG1 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.9e-30 Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TrEMBL
Match: tr|A0A0A0M004|A0A0A0M004_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G612320 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.9e-29 Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of CsGy1G029510.1 vs. TrEMBL
Match: tr|A0A1S3BPA0|A0A1S3BPA0_CUCME (beta-glucosidase 12 OS=Cucumis melo OX=3656 GN=BG2 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 8.5e-29 Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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