CsGy1G020750.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCCTTCCCAAAACCCTTTTTAAGATCCCAACTGCAAATGCAATTCGTCTTGAAGGAACAAAATTTTCCAATCCATGGCTGTTCTTCCCTCTGTCCATTCCATTTCCCTCTTTCGACCCAAAATTCCCACTCCAAAATCCACCTTCACCCCAAATGCCGAGCTCTTTAGACCCCACAAAATGCGAGTTCCATTCAAGCTCAAGGACGAACAGAACCGCATTTTCCACCAGCTCCCCTCTGGTCTTCAAATGGAGGTTATTGTGCAAAAGGGTTCTCCCAAATCATCCCAATCAATGCCTTCAGTTGTACAGCGCCCTCCTCTCCTCTTTCTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTCCCATTCTTTTCTGCTTCTGGGTTCGACTGCTACGCCGTTAGCTTGTTGGGTCAGGTCGGCCTCCCTCTCTATCCACCCCCTAATCCTGCCTTTCTTTATGAGGAGATATTTAGGAATTTGATTAGCATTTCTGACAATTGGGTTTGGATTACTTTCTCATTTCATGCTTAATTGACGATTTTACTTTTAAATTGCTTTACTCAAACCATTTTCATTTCATTGATAGTTAAGATTCCTAGTTCTTACTTGATATGAATTCTCAGGGTGAAAGTGATTCACCATCTGCATCTGTTGCTGGCACTCTCCAGGTAATTTAGCGTAGTTTCTCTGTCATTCGGACGTATTTGTGGTCGTTTTATTTATTGTTCATTCCAAATATTTTAGTAGACACATGCGAGTGATATTGCTGACTTCATTCGTACAAGTTTTGCAATACCACCAGTTTTGCTTGGACACTCGTTTGGAGGTCTTATTGTACAGTATTACATAGCAAACAACGATCATGGCCATTTTTCAGGTAGCTCATTTTCATCAATCTCTTGTTGACCAAGTTCTAAATTGGGATAATTCACAATTCAATAGGTTTGTAAAATGTGGAGATTTTATCAATCTCCAGTTGGAATTATATGGTTTTAGGTAACGAGGCCAAATCTTTCACATGTATATTTCATATTTTTTATCCAACAATCCATTGCATCCTGATTTGAGATTTCATATCTATGCATGACATAGATACAGAAGGATTGTTTCCAAGGCTTACTGGAGCTGTTCTTATCTGTTCTGTACCTCCCTCCGGCAACAGGTAAATCCATGCTGCTCAGTTCAAAATTGTTTGTTCATGGAAATGATCAAACTAACTCAGAATGTTTTTTCCTTCTTTAGTGGACTCGTACAACGCTATCTCTTTACAAAACCCATTGCTGCATTTAAGGTACTTGATTGTGAAATTGAGAATAATAGCTAGTGCTGAGCGGCTTGTGCATCCATTTTTATAAGTATATAGACTGTTTTTGGTTTATTTGGTATATCGCAAGTAGGCACATTCCTTTGATGGTGACTTCTATTTTCCCATCTCATATTTGTTTAATCAAGGCATTCCACAAAAAAACATTAGTGAACGTGACATTTTTACTAGATCTTAAACATTCTAGCGTGTTACCATATATTTTAGCGATTCATGGCTACCTTGTTTTTTTCACTTTGAGTAGGTGACACTCAGCTTGGCAGCAAAGGCTTTTCAAACATCTCTTTCTCTTTGCAAGGAGACATTTTTCTCTGTGACGATGGAGGATCATCTTGTTCTGCGGTTTGTATAGTTTGAAATGGCTCAAACTGATTTAGTTGCTGCATTCATTGTTATGTTTTGCAGTCCATAATAGCTTTGAAAACTTGATGGCCCTAATGATATGGAAATTTGGTAGCTTAGTTGGACAAAAAAAAAAAAAAAAAAGCAAATAAATTAATTACTGTAAGAAAGCAAGGGATTCCCTATTCACTAAAAAAAGGGACAAGAGTGTTGAAGTAAAATGGAAATACCATTTAGTTGAGTGAATGCTATGACTATTACGTTTAGGTGGAAAGGACAGAGAGCACGAAGAAGTTATGTGTATTCCTAGTTTGAATGTTAGTCTATGATTTGTACATTTCACGTGTTCAATATGGAGTAACATCAAGTTGTTTGAGTTTTTTTGCAAGTTGTATTTAGAGTTTTTACTCCGACTGGCAATAACCTTAAATTCAAACATGGTTGTATCAAAACTTACATCTATAAACGTGAGAATAACAAATTTTTTCTGCTTCAGAACTCTAAAATCCCTTCACTATCTAATGAAATGAACACTGTAATATTGTTCTTTCCAAAACCTTCAATTTCAGTTATCAAGAGCTGATGAAAGAAAGCTCAAGGATGCCATTATTTGACCTGAGGAAGTTGAATGCATCTCTTCCAGTACCTTCTCTTCCCAAATCTGGCATTGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGTAAATTTCAATGTTTAATACATTCATTCATTCAATTATTTCCATGTTTACTCATCTTCCATGTCTGGTTTCTATCAATTTCTCGATTTTGTTTTTGGTTTTAGGTGTTAATTTCAAGCATAATTCTTAAGACCAAATCCTTAATTGCTACGTTTAAATTCAAACCTCCTTTTGTGATGGATGGAAATTGTTGCTTATTGTGTAGGATGCTGAAGGATTGAATGAAACAGGCAGATTTTACAATGTGACACCAATCTGTGTACAAGGAGTTGCTCATGACATGATGTTAGATTGTGCTTGGCAAAAAGGTGCACAAACTATCCTGACGTGGCTTGATTGTTTAGGACCATAAAACATCATATGTTTATATTCTAATTTTGTTATCAACATTCATTTTCTCCTTTTCCCCTTTTCGAGAACAAAATTTCCATTTTTGTTCAAAATAATATAAATAGTTTCATTTCTCTATGTACCAGCTACGTTTGAAAAGCTTTCAAGTTCTAGATCTTCGTGTTTAAAGGTGGGGAGGGAAAAACAAGAGTTAAATGTGGCAAGATCCAAACAACCCAGACATAAAAAAAATGGGTTTTTTTTTTTTTTTTTTTGTTGATCTTTCAAAATTT AAAACCCTTCCCAAAACCCTTTTTAAGATCCCAACTGCAAATGCAATTCGTCTTGAAGGAACAAAATTTTCCAATCCATGGCTGTTCTTCCCTCTGTCCATTCCATTTCCCTCTTTCGACCCAAAATTCCCACTCCAAAATCCACCTTCACCCCAAATGCCGAGCTCTTTAGACCCCACAAAATGCGAGTTCCATTCAAGCTCAAGGACGAACAGAACCGCATTTTCCACCAGCTCCCCTCTGGTCTTCAAATGGAGGTTATTGTGCAAAAGGGTTCTCCCAAATCATCCCAATCAATGCCTTCAGTTGTACAGCGCCCTCCTCTCCTCTTTCTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTCCCATTCTTTTCTGCTTCTGGGTTCGACTGCTACGCCGTTAGCTTGTTGGGTCAGGGTGAAAGTGATTCACCATCTGCATCTGTTGCTGGCACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCGTACAAGTTTTGCAATACCACCAGTTTTGCTTGGACACTCGTTTGGAGGTCTTATTGTACAGTATTACATAGCAAACAACGATCATGGCCATTTTTCAGATACAGAAGGATTGTTTCCAAGGCTTACTGGAGCTGTTCTTATCTGTTCTGTACCTCCCTCCGGCAACAGTGGACTCGTACAACGCTATCTCTTTACAAAACCCATTGCTGCATTTAAGGTGACACTCAGCTTGGCAGCAAAGGCTTTTCAAACATCTCTTTCTCTTTGCAAGGAGACATTTTTCTCTGTGACGATGGAGGATCATCTTGTTCTGCGTTATCAAGAGCTGATGAAAGAAAGCTCAAGGATGCCATTATTTGACCTGAGGAAGTTGAATGCATCTCTTCCAGTACCTTCTCTTCCCAAATCTGGCATTGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGCTGAAGGATTGAATGAAACAGGCAGATTTTACAATGTGACACCAATCTGTGTACAAGGAGTTGCTCATGACATGATGTTAGATTGTGCTTGGCAAAAAGGTGCACAAACTATCCTGACGTGGCTTGATTGTTTAGGACCATAAAACATCATATGTTTATATTCTAATTTTGTTATCAACATTCATTTTCTCCTTTTCCCCTTTTCGAGAACAAAATTTCCATTTTTGTTCAAAATAATATAAATAGTTTCATTTCTCTATGTACCAGCTACGTTTGAAAAGCTTTCAAGTTCTAGATCTTCGTGTTTAAAGGTGGGGAGGGAAAAACAAGAGTTAAATGTGGCAAGATCCAAACAACCCAGACATAAAAAAAATGGGTTTTTTTTTTTTTTTTTTTGTTGATCTTTCAAAATTT ATGGCTGTTCTTCCCTCTGTCCATTCCATTTCCCTCTTTCGACCCAAAATTCCCACTCCAAAATCCACCTTCACCCCAAATGCCGAGCTCTTTAGACCCCACAAAATGCGAGTTCCATTCAAGCTCAAGGACGAACAGAACCGCATTTTCCACCAGCTCCCCTCTGGTCTTCAAATGGAGGTTATTGTGCAAAAGGGTTCTCCCAAATCATCCCAATCAATGCCTTCAGTTGTACAGCGCCCTCCTCTCCTCTTTCTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTCCCATTCTTTTCTGCTTCTGGGTTCGACTGCTACGCCGTTAGCTTGTTGGGTCAGGGTGAAAGTGATTCACCATCTGCATCTGTTGCTGGCACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCGTACAAGTTTTGCAATACCACCAGTTTTGCTTGGACACTCGTTTGGAGGTCTTATTGTACAGTATTACATAGCAAACAACGATCATGGCCATTTTTCAGATACAGAAGGATTGTTTCCAAGGCTTACTGGAGCTGTTCTTATCTGTTCTGTACCTCCCTCCGGCAACAGTGGACTCGTACAACGCTATCTCTTTACAAAACCCATTGCTGCATTTAAGGTGACACTCAGCTTGGCAGCAAAGGCTTTTCAAACATCTCTTTCTCTTTGCAAGGAGACATTTTTCTCTGTGACGATGGAGGATCATCTTGTTCTGCGTTATCAAGAGCTGATGAAAGAAAGCTCAAGGATGCCATTATTTGACCTGAGGAAGTTGAATGCATCTCTTCCAGTACCTTCTCTTCCCAAATCTGGCATTGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGCTGAAGGATTGAATGAAACAGGCAGATTTTACAATGTGACACCAATCTGTGTACAAGGAGTTGCTCATGACATGATGTTAGATTGTGCTTGGCAAAAAGGTGCACAAACTATCCTGACGTGGCTTGATTGTTTAGGACCATAA MAVLPSVHSISLFRPKIPTPKSTFTPNAELFRPHKMRVPFKLKDEQNRIFHQLPSGLQMEVIVQKGSPKSSQSMPSVVQRPPLLFLHGSYHAAWSWAEHWLPFFSASGFDCYAVSLLGQGESDSPSASVAGTLQTHASDIADFIRTSFAIPPVLLGHSFGGLIVQYYIANNDHGHFSDTEGLFPRLTGAVLICSVPPSGNSGLVQRYLFTKPIAAFKVTLSLAAKAFQTSLSLCKETFFSVTMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSLPKSGIEVLVLGASDDFIVDAEGLNETGRFYNVTPICVQGVAHDMMLDCAWQKGAQTILTWLDCLGP
BLAST of CsGy1G020750.1 vs. NCBI nr
Match: XP_004149673.1 (PREDICTED: uncharacterized protein LOC101204886 [Cucumis sativus] >KGN65526.1 hypothetical protein Csa_1G435710 [Cucumis sativus]) HSP 1 Score: 697.6 bits (1799), Expect = 2.1e-197 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. NCBI nr
Match: XP_023001441.1 (uncharacterized protein LOC111495573 isoform X1 [Cucurbita maxima]) HSP 1 Score: 611.3 bits (1575), Expect = 2.0e-171 Identity = 299/343 (87.17%), Postives = 319/343 (93.00%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. NCBI nr
Match: XP_022927236.1 (uncharacterized protein LOC111434144 isoform X1 [Cucurbita moschata]) HSP 1 Score: 610.9 bits (1574), Expect = 2.6e-171 Identity = 298/343 (86.88%), Postives = 320/343 (93.29%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. NCBI nr
Match: XP_022927237.1 (uncharacterized protein LOC111434144 isoform X2 [Cucurbita moschata]) HSP 1 Score: 604.0 bits (1556), Expect = 3.2e-169 Identity = 297/343 (86.59%), Postives = 319/343 (93.00%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. NCBI nr
Match: XP_023001442.1 (uncharacterized protein LOC111495573 isoform X2 [Cucurbita maxima]) HSP 1 Score: 602.1 bits (1551), Expect = 1.2e-168 Identity = 297/343 (86.59%), Postives = 317/343 (92.42%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TAIR10
Match: AT5G38360.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 286.6 bits (732), Expect = 2.1e-77 Identity = 149/237 (62.87%), Postives = 177/237 (74.68%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TrEMBL
Match: tr|A0A0A0M026|A0A0A0M026_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435710 PE=4 SV=1) HSP 1 Score: 697.6 bits (1799), Expect = 1.4e-197 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TrEMBL
Match: tr|M5WWG9|M5WWG9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G142000 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.3e-137 Identity = 247/346 (71.39%), Postives = 276/346 (79.77%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TrEMBL
Match: tr|A0A2I4E7W6|A0A2I4E7W6_9ROSI (uncharacterized protein LOC108987090 OS=Juglans regia OX=51240 GN=LOC108987090 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 2.0e-135 Identity = 241/344 (70.06%), Postives = 279/344 (81.10%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TrEMBL
Match: tr|A0A1U8K1Y1|A0A1U8K1Y1_GOSHI (uncharacterized protein LOC107912732 OS=Gossypium hirsutum OX=3635 GN=LOC107912732 PE=4 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 1.8e-131 Identity = 231/323 (71.52%), Postives = 270/323 (83.59%), Query Frame = 0
BLAST of CsGy1G020750.1 vs. TrEMBL
Match: tr|A0A067KA10|A0A067KA10_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12988 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 2.3e-131 Identity = 232/333 (69.67%), Postives = 273/333 (81.98%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
|