CsGy1G017350.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G017350.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	serine-rich protein-like protein
Location	Chr1 : 15562693 .. 15563304 (-)
Sequence length	612

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACTTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACTTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACTTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADDL

Homology

[Close]

BLAST of CsGy1G017350.1 vs. NCBI nr
Match: XP_004146710.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >KGN65199.1 hypothetical protein Csa_1G264020 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsGy1G017350.1 vs. NCBI nr
Match: XP_016899807.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 6.7e-66
Identity = 187/203 (92.12%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
                 XXXXXXXXXXXXX       RPISVLSRA+GNHQVVKKQS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGXXXXXXXXXXXXXDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsGy1G017350.1 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 3.7e-56
Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           XXXXXXX                   RPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CsGy1G017350.1 vs. NCBI nr
Match: XP_023530348.1 (uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 3.7e-56
Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           XXXXXXX                   RPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CsGy1G017350.1 vs. NCBI nr
Match: XP_022966156.1 (uncharacterized protein LOC111465917 [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 4.1e-55
Identity = 168/203 (82.76%), Postives = 173/203 (85.22%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           XXXXXXX                   RPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPR SRLS MSKADDL
Sbjct: 181 QRRRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of CsGy1G017350.1 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-31
Identity = 73/120 (60.83%), Postives = 85/120 (70.83%), Query Frame = 0


Query: 87  RPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNR 146
           R I+V S    NH    K    +R CMCSPTTHPGSFRCSLHK V     Q +  Y++N 
Sbjct: 104 RSIAVSSNKPSNHH---KIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNG 163

Query: 147 LNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADDL 204
           LN RRSAMTNSLVRIGGVEG+ +RRAL +LIRPSSH  +RR  + PR SRL+ MSKA+DL
Sbjct: 164 LNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of CsGy1G017350.1 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-31
Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 96  SGNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMT 155
           S NH++        R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMT
Sbjct: 114 SHNHKI-------SRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMT 173

Query: 156 NSLVRIGGVEGDILRRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADD 203
           NSLVRIGGVEG+ +RRAL +LIRPSSH  +RR  + PRPSRLSIM+KAD+
Sbjct: 174 NSLVRIGGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of CsGy1G017350.1 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-15
Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 102 VKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSS------NR----------LN 161
           V    Q KR C+CSPTTHPGSFRCS H+ ++ + S   +S      NR          LN
Sbjct: 61  VSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLN 120

Query: 162 ARRSAMTNSLVRIGGVEGDILRRAL-ASLIRPSSHSQRRRVDFCPRPSR 194
            R+ A+ NSL +IG VE +  RR+L A+L +PSS    RR +F PR SR
Sbjct: 121 LRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CsGy1G017350.1 vs. TAIR10
Match: AT1G67910.1 (unknown protein)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 18/38 (47.37%), Postives = 26/38 (68.42%), Query Frame = 0


Query: 97  GNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQ 135
           G+  + ++ S  K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

[Close]

BLAST of CsGy1G017350.1 vs. TAIR10
Match: AT1G24577.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 21/52 (40.38%), Postives = 30/52 (57.69%), Query Frame = 0


Query: 95  ASGNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSSNRLNA 147
           A G   + ++ S  K  C+CSPTTHPGSF+C LH+    Q +    +N L +
Sbjct: 15  AMGLGGLSRQTSITKTICICSPTTHPGSFKCKLHRTPSLQRNKSVETNILQS 66

[Close]

BLAST of CsGy1G017350.1 vs. TrEMBL
Match: tr|A0A0A0LW36|A0A0A0LW36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsGy1G017350.1 vs. TrEMBL
Match: tr|A0A1S4DUZ2|A0A1S4DUZ2_CUCME (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103487397 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.5e-66
Identity = 187/203 (92.12%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
                 XXXXXXXXXXXXX       RPISVLSRA+GNHQVVKKQS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGXXXXXXXXXXXXXDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsGy1G017350.1 vs. TrEMBL
Match: tr|A0A1S4E2K6|A0A1S4E2K6_CUCME (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 108/203 (53.20%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +S                                
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTS----SSSAFASSTSTFSSRSATSFFCRSTSPS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLS-RASGNHQVVKKQSQQKRTCMCSPTTH 120
                                     R +SV S R+ G ++VV++QS  KRTCMCSPTTH
Sbjct: 61  RVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGD+++RALA+LIRPSSH
Sbjct: 121 PGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSH 180

Query: 181 SQRRRVDFCPRPSRLSIMSKADD 203
            QRRRVDF P+ SRLSIMSKAD+
Sbjct: 181 QQRRRVDFRPKRSRLSIMSKADE 199

[Close]

BLAST of CsGy1G017350.1 vs. TrEMBL
Match: tr|A0A0A0LL69|A0A0A0LL69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.4e-42
Identity = 108/203 (53.20%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +S                                
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTS----SSSAFASSTSTFSSRSATSFFCRSTSPS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISV-LSRASGNHQVVKKQSQQKRTCMCSPTTH 120
                                     R +SV  SR+ G ++VV++QS  KRTCMCSPTTH
Sbjct: 61  RVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGD+++RALA+LIRPSSH
Sbjct: 121 PGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSH 180

Query: 181 SQRRRVDFCPRPSRLSIMSKADD 203
            QRRRVDF P+ SRLSIMSKAD+
Sbjct: 181 QQRRRVDFRPKRSRLSIMSKADE 199

[Close]

BLAST of CsGy1G017350.1 vs. TrEMBL
Match: tr|A0A2I4EMR7|A0A2I4EMR7_9ROSI (uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.0e-41
Identity = 125/201 (62.19%), Postives = 139/201 (69.15%), Query Frame = 0


Query: 2   AVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61
           A S R SSGPV+RSL+PSGRFY S S     XXXXXXXXXXXXXXXXXXXXX        
Sbjct: 3   ATSRRSSSGPVVRSLAPSGRFYDSHSPSRYSXXXXXXXXXXXXXXXXXXXXXRSASPTRV 62

Query: 62  XXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHPG 121
                                      +S      G++QVVK+Q  QKRTCMCSPTTHPG
Sbjct: 63  NMCGTSPSARSVRFSLDRSISPSRSISVSPRGNGGGSNQVVKRQG-QKRTCMCSPTTHPG 122

Query: 122 SFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQ 181
           SFRCSLHKG  SQ   PYS NRLNARRSAMTNSLVRIGGVEGD+++RALA+LIRPSSH Q
Sbjct: 123 SFRCSLHKGSGSQSVAPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQ 182

Query: 182 RRRVDFCPRPSRLSIMSKADD 203
           +RR DF PRPSRLS+MSKA++
Sbjct: 183 KRRADFLPRPSRLSVMSKAEE 202

The following BLAST results are available for this feature:

BLAST of CsGy1G017350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146710.1	2.1e-67	100.00	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus] >K...	[more]
XP_016899807.1	6.7e-66	92.12	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo]	[more]
XP_022933728.1	3.7e-56	83.25	uncharacterized protein LOC111441057 [Cucurbita moschata]	[more]
XP_023530348.1	3.7e-56	83.25	uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo]	[more]
XP_022966156.1	4.1e-55	82.76	uncharacterized protein LOC111465917 [Cucurbita maxima]	[more]

BLAST of CsGy1G017350.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25280.1	5.0e-31	60.83	serine-rich protein-related	[more]
AT5G11090.1	5.0e-31	63.64	serine-rich protein-related	[more]
AT5G20370.1	3.9e-15	44.95	serine-rich protein-related	[more]
AT1G67910.1	1.6e-05	47.37	unknown protein	[more]
AT1G24577.1	2.3e-04	40.38	unknown protein	[more]

BLAST of CsGy1G017350.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G017350.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW36\|A0A0A0LW36_CUCSA	1.4e-67	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1	[more]
tr\|A0A1S4DUZ2\|A0A1S4DUZ2_CUCME	4.5e-66	92.12	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S4E2K6\|A0A1S4E2K6_CUCME	2.6e-42	53.20	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
tr\|A0A0A0LL69\|A0A0A0LL69_CUCSA	3.4e-42	53.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]
tr\|A0A2I4EMR7\|A0A2I4EMR7_9ROSI	1.0e-41	62.19	uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 P...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G017350	CsGy1G017350	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G017350.1.CDS.1	CsGy1G017350.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G017350.1.exon.1	CsGy1G017350.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G017350.1	CsGy1G017350.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 7..202
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 7..202