CsGy1G013480.1 (mRNA) Cucumber (Gy14) v2

NameCsGy1G013480.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 8860812 .. 8861853 (-)
Sequence length336
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTTGGAGGAAACTGTGAGATAAGGAGCAAGATAAGCAACCAAAAAGAGAACGTAAAAAAAAAGAATGGTGCAATAGACTTGCTAACAGAAATTGTAGATCAACACAGAAACACTATTGAAAATGCAGACTCAAATGCTCCTTGGCAAAGTCATAGAAATAAAAGGATTTTAAGAAGCTGGTGTCCAAATAAAATTGTTAAGTGTGTACATTTGGCTACGCCTATCTTCATCCCTTTCTCTTTAAAAGAGTGTACTGTATGTCTAATTATACACAAGGGAGACTTATATACTGATTTTTAAATTAAAAAAAAGCATAGAGATTGGCAATTCAACTCAATGCTTGAAAGACAAAAGAATATTTGAGAGATCTTTCATAAAGAAAAACTGTTCTCAGAGAAAAAAAAATTAGTTAAATCATGTTCTTTTTTATGCATGCACAAGTTGAAATCATTTTTTTTCCATAAAAACTATGCACATTAGCACAATTATTTGTACACAATCATAGTTTCCAAAAGCAGTTCTTCCGATGGTAAAAACAATTTCTAGTTGTGCCATAAGAACCTTAAGTTAAGTTTGATTCGAAACATACTAAAGCATTATACTTACCTTCATTCTCAAACCATGCCTTACATTTTAGACAATTTTTCTGATAGTGTCCTAGTTTGTTGTAGAAACGATATCTATCCTTAATTTGTTCCTTTTTATGGATTGAGGAAAATGACTTATTTATCTTTAGTTGTCCATGGTTGTTCTTTCCATTTTTTCAAGGTTTTTTCTAGCCCCTTTGTGACTCATGAGATTGGCAAAGTGAATGAGCATACTTTGTAATTCATGGCATTCTATTTATCTTTCAGAGTGTTATAGCTCATGTGGAATTGACTATACTCTAAAAGGTAGAGAATTAAGGATAAATGTTACCAGAAAAATCTCATTAACTTATATTCCCATGACCTTTAGTCTTAGTGCCAAGTTCGTCATTTCAGGGATATGCCCATGTATAACACGAGAACAATCAAACTTGATGTTACTTGGTTAA

mRNA sequence

ATGTCATTTGGAGGAAACTGTGAGATAAGGAGCAAGATAAGCAACCAAAAAGAGAACGTAAAAAAAAAGAATGGTGCAATAGACTTGCTAACAGAAATTGTAGATCAACACAGAAACACTATTGAAAATGCAGACTCAAATGCTCCTTGGCAAAAGTGTTATAGCTCATGTGGAATTGACTATACTCTAAAAGGTAGAGAATTAAGGATAAATGTTACCAGAAAAATCTCATTAACTTATATTCCCATGACCTTTAGTCTTAGTGCCAAGTTCGTCATTTCAGGGATATGCCCATGTATAACACGAGAACAATCAAACTTGATGTTACTTGGTTAA

Coding sequence (CDS)

ATGTCATTTGGAGGAAACTGTGAGATAAGGAGCAAGATAAGCAACCAAAAAGAGAACGTAAAAAAAAAGAATGGTGCAATAGACTTGCTAACAGAAATTGTAGATCAACACAGAAACACTATTGAAAATGCAGACTCAAATGCTCCTTGGCAAAAGTGTTATAGCTCATGTGGAATTGACTATACTCTAAAAGGTAGAGAATTAAGGATAAATGTTACCAGAAAAATCTCATTAACTTATATTCCCATGACCTTTAGTCTTAGTGCCAAGTTCGTCATTTCAGGGATATGCCCATGTATAACACGAGAACAATCAAACTTGATGTTACTTGGTTAA

Protein sequence

MSFGGNCEIRSKISNQKENVKKKNGAIDLLTEIVDQHRNTIENADSNAPWQKCYSSCGIDYTLKGRELRINVTRKISLTYIPMTFSLSAKFVISGICPCITREQSNLMLLG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy1G013480CsGy1G013480gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G013480.1.CDS.2CsGy1G013480.1.CDS.2CDS
CsGy1G013480.1.CDS.1CsGy1G013480.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G013480.1.exon.2CsGy1G013480.1.exon.2exon
CsGy1G013480.1.exon.1CsGy1G013480.1.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy1G013480.1CsGy1G013480.1-proteinpolypeptide


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47