CsGy1G012820.1 (mRNA) Cucumber (Gy14) v2

NameCsGy1G012820.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 8232727 .. 8233280 (-)
Sequence length312
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGATTTCTATCAAATTTCTTTAATTACAAATAAGTATTTTTTCTTTTTTTAGTGGTTCTAAATAGCAAAAGATTTGAATATTCTACTTTTATAGAATAGATAGTAATGAGTCAAAATCTCATGAAAATGAAGTTGTAAGTAGAAATGAAAGGGATCGAGGAGAGATTGAAGGCTCCCATAGGTCAAAAGTAGAGTTACATGTTATAAAATAAAATACTTTCATAGGATAAAACATTATGTTTTATCTTGCTCCATTTAATTGGGTAATTTTGTTGTATTTTACAAATTTATTTTCAATTTTACAGATATCAAATCTAACTTAGGCAGAATTGACCCTTAAAGCCAATTTTGGATTTAAATGCGTCTGGGTTGATACTTCAGTGTTGCTTGACACTTATTGCAACGCCAAAACCTGAGAGCATGGTTTTCTATTTTGAAGGAGTATCACGACACTACTCCTTAGTGCCACGAGGCTACGATGTACAACGAAAACATGCAACATTGCTAAGTGATGCAGTACTATACGCTAAAACACAAGAGTTACGTTGA

mRNA sequence

ATGTGTGATTTCTATCAAATTTCTTTAATTACAAATAAAATAGATAGTAATGAGTCAAAATCTCATGAAAATGAAGTTGTAAGTAGAAATGAAAGGGATCGAGGAGAGATTGAAGGCTCCCATAGGTCAAAAGTAGAGTTACATTGTTGCTTGACACTTATTGCAACGCCAAAACCTGAGAGCATGGTTTTCTATTTTGAAGGAGTATCACGACACTACTCCTTAGTGCCACGAGGCTACGATGTACAACGAAAACATGCAACATTGCTAAGTGATGCAGTACTATACGCTAAAACACAAGAGTTACGTTGA

Coding sequence (CDS)

ATGTGTGATTTCTATCAAATTTCTTTAATTACAAATAAAATAGATAGTAATGAGTCAAAATCTCATGAAAATGAAGTTGTAAGTAGAAATGAAAGGGATCGAGGAGAGATTGAAGGCTCCCATAGGTCAAAAGTAGAGTTACATTGTTGCTTGACACTTATTGCAACGCCAAAACCTGAGAGCATGGTTTTCTATTTTGAAGGAGTATCACGACACTACTCCTTAGTGCCACGAGGCTACGATGTACAACGAAAACATGCAACATTGCTAAGTGATGCAGTACTATACGCTAAAACACAAGAGTTACGTTGA

Protein sequence

MCDFYQISLITNKIDSNESKSHENEVVSRNERDRGEIEGSHRSKVELHCCLTLIATPKPESMVFYFEGVSRHYSLVPRGYDVQRKHATLLSDAVLYAKTQELR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy1G012820CsGy1G012820gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy1G012820.1CsGy1G012820.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G012820.1.CDS.3CsGy1G012820.1.CDS.3CDS
CsGy1G012820.1.CDS.2CsGy1G012820.1.CDS.2CDS
CsGy1G012820.1.CDS.1CsGy1G012820.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G012820.1.exon.3CsGy1G012820.1.exon.3exon
CsGy1G012820.1.exon.2CsGy1G012820.1.exon.2exon
CsGy1G012820.1.exon.1CsGy1G012820.1.exon.1exon


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..40