CsGy1G009560.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G009560.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	F-box protein At1g67340
Location	Chr1 : 5948099 .. 5949804 (-)
Sequence length	1534

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCACTACATCCAATTCTCAATTCTGGCGTTATTTCATCCTCCATTAACGCACCTCCATTTTTGCTCTCCTCCCATGGCGCTTTCTTTTTCAACGTGAACGTCACTACATCCAATTCTCAATTTCGGAATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTCTGGACCTCGTCAATGTTATGATAACGTAAGAATTGCTTTCCGTGTGATTCGCCTAATTTGTCGTGTTTGTTGTAATTTTGTGTTTAATTTGTTTTGTTGGCTTATTGTAGATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGGTTCGTGTAATTGGTTGAGTTTTTCTCTCTTCAATTTCAACCTGATTTTATTTTTAATGTTATATCTGTTTTGTTTCTTTTTTTCAGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAAGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAAGCTTAGGTCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTTATTTTCTCGTTTTTTTTAACACGTAGATGAGGTTTTTGTCTACAACTTTTTCTTTTCTTTTCTTTTTAAATTTTAGAGGGAAAACTACCTAAATTTTGATGAATACATTGGTTTTAAAATGGATAATTTTAGTCTCTATATTGATAAATAATACTATACTGTTTTCAAAATGTACATTTTCAATCCTAATTTTAAAAATCAAGTTTATACATTTTCAATCCTAATTTTAAAAATCAAGTTTATATATTTTCAATCCTAATTTTAA

mRNA sequence

GTCACTACATCCAATTCTCAATTCTGGCGTTATTTCATCCTCCATTAACGCACCTCCATTTTTGCTCTCCTCCCATGGCGCTTTCTTTTTCAACGTGAACGTCACTACATCCAATTCTCAATTTCGGAATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTCTGGACCTCGTCAATGTTATGATAACATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAAGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAAGCTTAGGTCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTTATTTTCTCGTTTTTTTTAACACGTAGATGAGGTTTTTGTCTACAACTTTTTCTTTTCTTTTCTTTTTAAATTTTAGAGGGAAAACTACCTAAATTTTGATGAATACATTGGTTTTAAAATGGATAATTTTAGTCTCTATATTGATAAATAATACTATACTGTTTTCAAAATGTACATTTTCAATCCTAATTTTAAAAATCAAGTTTATACATTTTCAATCCTAATTTTAAAAATCAAGTTTATATATTTTCAATCCTAATTTTAA

Coding sequence (CDS)

ATGTTGTGTAATAAAAGAAGGAGAACTTCCACCAGCGCCGCCACCGGAATTTCTGATCTCTTCGATGGTTTACCGGACGATCTAGTCGTTGTCGTCCTTGGGAAGCTTAGCGCCACCGCTTCTTCTCCTCTGGACCTCGTCAATGTTATGATAACATGTAAAAGGTTTAATCGATTGGCTCTGCATCCAATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAATTGGTCTGAATCGACTCATAGATTTTTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCAAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGTATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCCGCCACCGCCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGACTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCTAACCAATTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATCTATCGCCGAAGGACTGAGACTTTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAATTATTGTTCACGAGGATGCCAAGCTCTAGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCTTTCGATCGGTGGCTGATCGAAGAGGATGAACTTGAAGGCGACGACGACGGGGGCGTCGTAAATAGAATAGAGCAGTTTGACGACGGTGAGAATGTGGAATCTGAATAA

Protein sequence

MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE

Homology

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BLAST of CsGy1G009560.1 vs. NCBI nr
Match: XP_004154118.1 (PREDICTED: F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_1G050480 [Cucumis sativus])

HSP 1 Score: 718.0 bits (1852), Expect = 1.6e-203
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

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BLAST of CsGy1G009560.1 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 695.3 bits (1793), Expect = 1.1e-196
Identity = 341/351 (97.15%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE++ELEGD+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

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BLAST of CsGy1G009560.1 vs. NCBI nr
Match: XP_022923648.1 (F-box protein At5g50450-like [Cucurbita moschata])

HSP 1 Score: 643.7 bits (1659), Expect = 3.7e-181
Identity = 317/351 (90.31%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVLGKLSA ASSP D+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   +  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ +DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

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BLAST of CsGy1G009560.1 vs. NCBI nr
Match: XP_023519168.1 (F-box protein At5g50450-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.3 bits (1653), Expect = 1.9e-180
Identity = 317/351 (90.31%), Postives = 323/351 (92.02%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFDGLPDDLVVVVLGKLSA ASSP D+VNVM TCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMRTCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLGDGEDVESE 350

[Close]

BLAST of CsGy1G009560.1 vs. NCBI nr
Match: XP_023001353.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 638.6 bits (1646), Expect = 1.2e-179
Identity = 315/351 (89.74%), Postives = 322/351 (91.74%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS   GISDLFD LPDDLVVVVLGKLSA ASSP D+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSES+HRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QN SEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDDDG  VNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLGDGEDVESE 350

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BLAST of CsGy1G009560.1 vs. TAIR10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 439.9 bits (1130), Expect = 1.5e-123
Identity = 213/322 (66.15%), Postives = 251/322 (77.95%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQNVSEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASGRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA   G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEEDELEGD 331
           RHK +CAP  RWL E D  EG+
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGN 362

[Close]

BLAST of CsGy1G009560.1 vs. TAIR10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 419.1 bits (1076), Expect = 2.7e-117
Identity = 203/339 (59.88%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 4   NKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSP D + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++VSEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIE 341
           QALDW+ +HK EC P D W+    E+ GDD   V   I+
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAVAVEID 330

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BLAST of CsGy1G009560.1 vs. TAIR10
Match: AT2G24640.1 (ubiquitin-specific protease 19)

HSP 1 Score: 46.2 bits (108), Expect = 4.8e-05
Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF 318
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGF 104

[Close]

BLAST of CsGy1G009560.1 vs. TAIR10
Match: AT1G17110.2 (ubiquitin-specific protease 15)

HSP 1 Score: 45.4 bits (106), Expect = 8.2e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CsGy1G009560.1 vs. TAIR10
Match: AT4G24560.1 (ubiquitin-specific protease 16)

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 20/44 (45.45%), Postives = 23/44 (52.27%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEEDELEGD 331
           RCS C  V YCS  CQ + W+  HK EC P       EDE + D
Sbjct: 84  RCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDSEDESDSD 127

[Close]

BLAST of CsGy1G009560.1 vs. Swiss-Prot
Match: sp|Q9FYF9|FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.7e-122
Identity = 213/322 (66.15%), Postives = 251/322 (77.95%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNVSEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQNVSEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASGRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA   G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEEDELEGD 331
           RHK +CAP  RWL E D  EG+
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGN 362

[Close]

BLAST of CsGy1G009560.1 vs. Swiss-Prot
Match: sp|Q9FK27|FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.9e-116
Identity = 203/339 (59.88%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 4   NKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSP D + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++VSEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIE 341
           QALDW+ +HK EC P D W+    E+ GDD   V   I+
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAVAVEID 330

[Close]

BLAST of CsGy1G009560.1 vs. Swiss-Prot
Match: sp|Q2YDC9|PDCD2_BOVIN (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 28/95 (29.47%), Postives = 43/95 (45.26%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECA------- 322
           +  G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA       
Sbjct: 128 LKSGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTDNLDN 187

Query: 323 --PFDRWLIEEDELEGDDDGGVVNRIEQFDDGENV 349
             P   +L  E E+  + +  ++  + + DD   +
Sbjct: 188 IVPDHNFLFPEFEIVIETEDEIMPEVVERDDESEI 215

[Close]

BLAST of CsGy1G009560.1 vs. Swiss-Prot
Match: sp|Q09415|SET14_CAEEL (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 315
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of CsGy1G009560.1 vs. Swiss-Prot
Match: sp|Q16342|PDCD2_HUMAN (Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 6.6e-04
Identity = 23/56 (41.07%), Postives = 27/56 (48.21%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           +  G  LC   GC  P+T       CS C    YCS+  Q LDW+L HK  CA  D
Sbjct: 128 LKSGAHLCRVCGCLGPKT-------CSRCHKAYYCSKEHQTLDWRLGHKQACAQPD 176

[Close]

BLAST of CsGy1G009560.1 vs. TrEMBL
Match: tr|A0A0A0LTV0|A0A0A0LTV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 1.0e-203
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of CsGy1G009560.1 vs. TrEMBL
Match: tr|A0A1S3AZD5|A0A1S3AZD5_CUCME (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 7.2e-197
Identity = 341/351 (97.15%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE++ELEGD+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of CsGy1G009560.1 vs. TrEMBL
Match: tr|M5WT99|M5WT99_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151000 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.8e-132
Identity = 236/350 (67.43%), Postives = 276/350 (78.86%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           M  ++++  S+   T  SD FDGLPDDLVV +L KLS++ASSP DL+N++ITCKR NRL 
Sbjct: 4   MTLHRKKLKSSRRTTAKSDFFDGLPDDLVVFILCKLSSSASSPSDLINILITCKRLNRLG 63

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LH +VLSKAGPKAF I+ KNWS+S HRFLK CVSAGN+EACYTLGMI FY L+NRG+GAS
Sbjct: 64  LHSVVLSKAGPKAFAIRAKNWSDSAHRFLKQCVSAGNIEACYTLGMIRFYSLQNRGSGAS 123

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAA++SH  ALYSLA+VQFNGSGGSK +K+LRAGVALC RAA LGH+DALRELGHCL
Sbjct: 124 LMAKAAMRSHAPALYSLAVVQFNGSGGSKKEKDLRAGVALCARAASLGHVDALRELGHCL 183

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGS--LLSDFGC 240
           QDGYGV QNV+EGRRLL++ANARELA +  S+  R H  +H  +      S  LLSDFGC
Sbjct: 184 QDGYGVKQNVAEGRRLLVQANARELASVLRSATWRSHHYQHLYACLTGLVSCPLLSDFGC 243

Query: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300
           N PAPE HPAN+FL++WF SGR    +G+RLCS+ GCGRPETR HEFRRCSVCG VNYCS
Sbjct: 244 NVPAPELHPANRFLKEWFGSGRAISGQGMRLCSHVGCGRPETRPHEFRRCSVCGTVNYCS 303

Query: 301 RGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENV 349
           RGCQALDWKLRHK +C P +RWL  + EL G  +GG         DGENV
Sbjct: 304 RGCQALDWKLRHKVKCKPIERWLGVDGELGGLVEGG---------DGENV 344

[Close]

BLAST of CsGy1G009560.1 vs. TrEMBL
Match: tr|A0A2I4F0L2|A0A2I4F0L2_9ROSI (F-box protein At1g67340 OS=Juglans regia OX=51240 GN=LOC108994425 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 4.0e-131
Identity = 237/335 (70.75%), Postives = 268/335 (80.00%), Query Frame = 0


Query: 5   KRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLALHPI 64
           KR RT  +  +G SD FD LP+DL+V +L KLS++ASSP DLVNV+ITCKR NRL LHP+
Sbjct: 4   KRPRTPATTLSGKSDFFDDLPEDLLVFILCKLSSSASSPSDLVNVLITCKRLNRLGLHPL 63

Query: 65  VLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAK 124
           VLSKAG KAF I+ KNWSES  RFLKLC +AGNVEA YTLGMI FYCL+NRG+GASLMAK
Sbjct: 64  VLSKAGAKAFAIKAKNWSESADRFLKLCANAGNVEASYTLGMIRFYCLQNRGSGASLMAK 123

Query: 125 AAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGY 184
           AAIKSH  ALYSLA++QFNGSGGSKS+KNL+AGVALC RAA+LGH+DALRELGHC QDGY
Sbjct: 124 AAIKSHAPALYSLAVIQFNGSGGSKSEKNLQAGVALCARAAFLGHVDALRELGHCFQDGY 183

Query: 185 GVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHR----QSATDSG-GSLLSDFGCN 244
           G  QN+++GRR L++ANARELA    S LR L  S  R       + SG   LLSDFGCN
Sbjct: 184 GARQNIAQGRRFLVQANARELA----SVLRYLSSSAWRLPNPPCVSGSGCEGLLSDFGCN 243

Query: 245 FPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSR 304
            PAPEAHP N+FLRDWF SG G ++EGLRLCS+ GCGRPETR HEFRRCSVCG VNYCSR
Sbjct: 244 VPAPEAHPVNRFLRDWFESGTGGLSEGLRLCSHGGCGRPETRAHEFRRCSVCGMVNYCSR 303

Query: 305 GCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGG 335
           GCQALDWKLRHK EC P +RWL   DE+ G  D G
Sbjct: 304 GCQALDWKLRHKAECMPIERWL---DEVGGAGDNG 331

[Close]

BLAST of CsGy1G009560.1 vs. TrEMBL
Match: tr|A0A061FZI2|A0A061FZI2_THECC (HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=3641 GN=TCM_014641 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 2.6e-130
Identity = 225/328 (68.60%), Postives = 265/328 (80.79%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60
           ML  K++RT T   T  SDLFDG+PDDLVV +L KLS++ S P D VN+++TCKR NRL 
Sbjct: 1   MLQKKKQRT-TRKITDKSDLFDGVPDDLVVSILCKLSSSVSCPTDFVNILLTCKRLNRLG 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP+VLSKAG KA  ++ KNWS+S HRFLK CVSAGN+EACYTLGMI FYCL+NRG+GAS
Sbjct: 61  LHPLVLSKAGSKALAVKAKNWSDSAHRFLKHCVSAGNIEACYTLGMIRFYCLQNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAA+KSH  ALYSLA++QFNGSGGSK++K+LRAGVALC RAA+LGH+DALRELGHCL
Sbjct: 121 LMAKAAMKSHAPALYSLAVIQFNGSGGSKNNKDLRAGVALCARAAFLGHVDALRELGHCL 180

Query: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQS--------ATDSGGSL 240
           QDGYGV QN++EGRRLLI+ANARELA   N+ ++R    +H++          T SG  L
Sbjct: 181 QDGYGVRQNITEGRRLLIQANARELASSLNTVVKRQLKQQHQRRLNYQHYAYMTGSGCPL 240

Query: 241 LSDFGCNFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCG 300
           LSDFGCN P PE HP + FL++WF SG G + +GLRLCS+ GCGRPETR HEFRRCSVCG
Sbjct: 241 LSDFGCNVPVPEGHPVHVFLKEWFESGLGELGQGLRLCSHKGCGRPETRAHEFRRCSVCG 300

Query: 301 NVNYCSRGCQALDWKLRHKTECAPFDRW 321
            VNYCSRGCQALDWKLRHK EC P +RW
Sbjct: 301 TVNYCSRGCQALDWKLRHKVECGPMERW 327

The following BLAST results are available for this feature:

BLAST of CsGy1G009560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154118.1	1.6e-203	100.00	PREDICTED: F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical pr...	[more]
XP_008439699.1	1.1e-196	97.15	PREDICTED: F-box protein At1g67340 [Cucumis melo]	[more]
XP_022923648.1	3.7e-181	90.31	F-box protein At5g50450-like [Cucurbita moschata]	[more]
XP_023519168.1	1.9e-180	90.31	F-box protein At5g50450-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001353.1	1.2e-179	89.74	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of CsGy1G009560.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67340.1	1.5e-123	66.15	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	2.7e-117	59.88	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	4.8e-05	44.44	ubiquitin-specific protease 19	[more]
AT1G17110.2	8.2e-05	50.00	ubiquitin-specific protease 15	[more]
AT4G24560.1	1.4e-04	45.45	ubiquitin-specific protease 16	[more]

BLAST of CsGy1G009560.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FYF9\|FB76_ARATH	2.7e-122	66.15	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
sp\|Q9FK27\|FB342_ARATH	4.9e-116	59.88	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
sp\|Q2YDC9\|PDCD2_BOVIN	3.0e-04	29.47	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
sp\|Q09415\|SET14_CAEEL	3.0e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
sp\|Q16342\|PDCD2_HUMAN	6.6e-04	41.07	Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2	[more]

BLAST of CsGy1G009560.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTV0\|A0A0A0LTV0_CUCSA	1.0e-203	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1	[more]
tr\|A0A1S3AZD5\|A0A1S3AZD5_CUCME	7.2e-197	97.15	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
tr\|M5WT99\|M5WT99_PRUPE	2.8e-132	67.43	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151000 PE=4 SV=1	[more]
tr\|A0A2I4F0L2\|A0A2I4F0L2_9ROSI	4.0e-131	70.75	F-box protein At1g67340 OS=Juglans regia OX=51240 GN=LOC108994425 PE=4 SV=1	[more]
tr\|A0A061FZI2\|A0A061FZI2_THECC	2.6e-130	68.60	HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=36...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR011990	TPR-like_helical_dom_sf
IPR002893	Znf_MYND

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G009560	CsGy1G009560	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G009560.1	CsGy1G009560.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009560.1.five_prime_UTR.1	CsGy1G009560.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009560.1.exon.3	CsGy1G009560.1.exon.3	exon
CsGy1G009560.1.exon.2	CsGy1G009560.1.exon.2	exon
CsGy1G009560.1.exon.1	CsGy1G009560.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009560.1.CDS.3	CsGy1G009560.1.CDS.3	CDS
CsGy1G009560.1.CDS.2	CsGy1G009560.1.CDS.2	CDS
CsGy1G009560.1.CDS.1	CsGy1G009560.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G009560.1.three_prime_UTR.1	CsGy1G009560.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.60.180		coord: 264..316 e-value: 5.4E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..351
None	No IPR available	PANTHER	PTHR12298	PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED	coord: 4..342
None	No IPR available	PANTHER	PTHR12298:SF37	SUBFAMILY NOT NAMED	coord: 4..342
None	No IPR available	SUPERFAMILY	SSF144232	HIT/MYND zinc finger-like	coord: 270..319
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 86..200
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 274..314 e-value: 2.7E-8 score: 33.6
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 272..314 score: 11.205
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 68..214 e-value: 4.1E-16 score: 61.5
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 18..75