CsGy1G003670.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G003670.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	hypothetical protein
Location	Chr1 : 2314879 .. 2315493 (-)
Sequence length	615

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAA

mRNA sequence

ATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAA

Coding sequence (CDS)

ATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAA

Protein sequence

MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGLPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL

Homology

[Close]

BLAST of CsGy1G003670.1 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_1G022530 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 2.9e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60
           MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60

Query: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120
           LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL
Sbjct: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120

Query: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180
           PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG
Sbjct: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180

Query: 181 GLFDHTDVAAELPTAYRSERMPCL 205
           GLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of CsGy1G003670.1 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 9.1e-95
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 60

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 61  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 120

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 121 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 180

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of CsGy1G003670.1 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 7.0e-63
Identity = 150/219 (68.49%), Postives = 162/219 (73.97%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAP-----------VSHSTD 60
           ME  +DSRKRLRD+SNDSLFN IGSNSKF+RL++      DAP            S   D
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPNASVSSDAKSIDSSGLD 60

Query: 61  SFHSHHTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGF 120
           SF + + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VP    VP VQPELGF
Sbjct: 61  SFQA-NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP----VPSVQPELGF 120

Query: 121 LLEASDDELGLPPAAGEKEEIE----EAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEI 180
           LLEASDDELGLPP AGEKEE E     AEF GSGG+KG LG EDE V NYCW +NLR E 
Sbjct: 121 LLEASDDELGLPP-AGEKEETEAVNFAAEFLGSGGMKGILGLEDESVPNYCWLENLRSE- 180

Query: 181 KEWSTEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 205
            EWS EEEEEVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 NEWSREEEEEVVVLGGLFDHTDVATEL--AYRSETMPCL 210

[Close]

BLAST of CsGy1G003670.1 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 147/214 (68.69%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPV------SHSTDSFHSH 60
           ME  +DSRKRLRD+SNDSLFN IGSNSKF+RL++      DAP+      + S DSF + 
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA- 60

Query: 61  HTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEAS 120
           + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VP    VP  QPELGFLLEAS
Sbjct: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP----VPSGQPELGFLLEAS 120

Query: 121 DDELGLPPAAGEKEEIE----EAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWST 180
           DDELGLPP AGEKEE E     AEF GSG +KG LG EDE V NYCW +NLR E  EW+ 
Sbjct: 121 DDELGLPP-AGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNR 180

Query: 181 EEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 205
           EEEEEVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EEEEEVVVLGGLFDHTDVATEL--AYRSETMPCL 205

[Close]

BLAST of CsGy1G003670.1 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 131/234 (55.98%), Postives = 153/234 (65.38%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNF------DAP----------- 60
           MEP +DSRKR+RD+SN+SLFN +G  SK LR ++ A  NF      DAP           
Sbjct: 1   MEPCIDSRKRVRDESNESLFNFVG--SKILRFDS-AEFNFISPDFDDAPVDSVSSDAESI 60

Query: 61  VSHSTDSFHSHHT---------IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEV 120
           VS  + + HS+ +         I+EDLLKILD+ D SIDRE  I DLDSVI SFEKEI V
Sbjct: 61  VSKQSGAIHSNDSGLDSFQPLPIREDLLKILDEADVSIDRELAIPDLDSVISSFEKEINV 120

Query: 121 PVTVTVPVVQPELGFLLEASDDELGLPPAA--GEKEEIE-EAEFSGSGGVKGGLGFEDEI 180
           P    VP VQPELG+LLEASDDELGLPPAA  GE E +    ++SG  G+KG LGFEDE 
Sbjct: 121 P----VPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGIAGMKGFLGFEDE- 180

Query: 181 VSNYCWFDNLRCEIKEWSTEEEEEVVALGGLFDH-TDVAAELPTAYRSERMPCL 205
           V NYCW +NL  EI EW+   E+EV ALGGL DH TD A E+P  YRSE M CL
Sbjct: 181 VPNYCWLENLSSEI-EWN-RSEDEVAALGGLLDHNTDGAVEMP-PYRSETMFCL 223

[Close]

BLAST of CsGy1G003670.1 vs. TAIR10
Match: AT1G13360.1 (unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 54/145 (37.24%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 79  QDLDSVIRSFEKEIEVPVTVTVP------VVQPELGFLLEASDDELGLPPAAG------E 138
           QDLDSV++SFE E+    T T          QP+LG+LLEASDDELGLPP          
Sbjct: 55  QDLDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVA 114

Query: 139 KEEIEEAEF-------SGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 198
           KEE+            S S G+    GFED  VSNY   D            +  + VA+
Sbjct: 115 KEEVTTETVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLD------FGSGVGDGGDYVAV 174

Query: 199 GGLFDHTDVAAELPT--AYRSERMP 203
            GLF+ +D   +     ++RSE +P
Sbjct: 175 EGLFEFSDDCFDSGDLFSWRSESLP 192

[Close]

BLAST of CsGy1G003670.1 vs. TAIR10
Match: AT3G25870.1 (unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-07
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 60  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIE-VPVTVTVPVVQPELGFLLEASDDEL 119
           D+ ++ DD       +   QDLDSV++SFE E+      ++    QP+LG+L EASDDEL
Sbjct: 30  DVKRLRDDLFDDSGLDPVSQDLDSVMKSFENELSTTTAALSSGETQPDLGYLFEASDDEL 89

Query: 120 GLPP 123
           GLPP
Sbjct: 90  GLPP 93

[Close]

BLAST of CsGy1G003670.1 vs. TrEMBL
Match: tr|A0A0A0LS21|A0A0A0LS21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.9e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60
           MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60

Query: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120
           LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL
Sbjct: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120

Query: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180
           PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG
Sbjct: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180

Query: 181 GLFDHTDVAAELPTAYRSERMPCL 205
           GLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of CsGy1G003670.1 vs. TrEMBL
Match: tr|A0A1S3BWV1|A0A1S3BWV1_CUCME (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 6.0e-95
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 60

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 61  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 120

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 121 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 180

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of CsGy1G003670.1 vs. TrEMBL
Match: tr|A0A2P6P3M3|A0A2P6P3M3_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0185281 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 98/239 (41.00%), Postives = 135/239 (56.49%), Query Frame = 0


Query: 1   MEPSLDSRKRLR-DDSNDSLFNSIGS---NSKFLRLE-----NPAASNFDAPVSHSTDSF 60
           M+ S  + KR R DDS DS  N        SK +R++     N  AS+ D+ V  ++D F
Sbjct: 1   MDNSNPNGKRPRDDDSADSGRNEAAEFRPESKLIRVDSSSSINSDASSGDSNVRVNSDEF 60

Query: 61  HSHHT----IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVT---------- 120
                    IQEDLL ILDD++A  D +  IQ LDSVI+SFE+EI+VP            
Sbjct: 61  DMDSAEAKMIQEDLLNILDDSEAVTDPDPAIQGLDSVIKSFEEEIQVPAAPAFAPPVETT 120

Query: 121 ----VTVPVVQPELGFLLEASDDELGLPP----AAGEKEEIEEAEFSGS---GGVKGGLG 180
                + P  QPELG+LLEASDDELGLPP    AA E++++E A+F+ S     + G LG
Sbjct: 121 SGSGESSPSSQPELGYLLEASDDELGLPPTNNGAAREEKKMEAADFTLSPPAAALDGMLG 180

Query: 181 FEDEIVSNYCWFDNLRCEIKEWS-TEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 205
           FE++++ +Y  FD     I  +S +    E VALGGLFD++D  A    ++R+E +P L
Sbjct: 181 FENDMIPSYDAFD---FGIGGYSDSNGGGEYVALGGLFDYSDGGA-TEVSWRTESLPAL 235

[Close]

BLAST of CsGy1G003670.1 vs. TrEMBL
Match: tr|A0A2I0HIP4|A0A2I0HIP4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_048126 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.8e-21
Identity = 74/162 (45.68%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 57  IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPV----VQPELGFLLE 116
           IQ+DLL ILDD+D + DR+  IQ LDSVIRSFE+EI VP    V +     Q ELG+LLE
Sbjct: 60  IQDDLLNILDDSDGTADRDPAIQGLDSVIRSFEEEILVPAQPPVALDRADAQTELGYLLE 119

Query: 117 ASDDELGLPPAAG-----EKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKE 176
           ASDDELGLPP+ G      K E  EA  +   G    LGF+DE+  NY  F+   C   E
Sbjct: 120 ASDDELGLPPSFGPLEDERKSEAAEAPATSGFGFNDSLGFDDEL-PNYDSFELGMCGGPE 179

Query: 177 WST----EEEEEVVALGGLFDHTDVAAE-LPTAYRSERMPCL 205
             +    E + + V LGGLFD TD   +     +R E +P +
Sbjct: 180 VGSHNNHENDGQFVTLGGLFDFTDDGGDGSELLWRPESLPAM 220

[Close]

BLAST of CsGy1G003670.1 vs. TrEMBL
Match: tr|A0A2P4KPA4|A0A2P4KPA4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78493 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 84/220 (38.18%), Postives = 116/220 (52.73%), Query Frame = 0


Query: 5   LDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQEDLLKI 64
           ++++++L  D NDS  NS       +  +N A S       +        H  +EDLL I
Sbjct: 1   MENKRKL--DENDSDLNSPEPKRIRIDSDNSAESTL-VNSENXXXXXXXTHLSEEDLLNI 60

Query: 65  LDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTV-------PVVQPELGFLLEASDDE 124
           LDD+D   DR+  IQ LDSVI+SFE+EI VP    V          QPELG+LLEASDDE
Sbjct: 61  LDDSDIVTDRDPAIQGLDSVIKSFEEEILVPAPAAVVDQTSDSGESQPELGYLLEASDDE 120

Query: 125 LGLPP--AAGEKEEIEEAEFSGSG------GVKG-GLGFEDEIVSNYCWFDNLRCEIKEW 184
           LGLPP  ++GE+ +IE  +F  S       G+ G  LGFE+EI S   +   +   ++  
Sbjct: 121 LGLPPTTSSGEEVKIEAVDFEASSAGPEAVGLDGILLGFENEIPSYDSFEFGIGVGLESN 180

Query: 185 STEEEEEVVALGGLFDHT----DVAAELPTAYRSERMPCL 205
             +   E VA GGLFD++    D A +    +R E +P L
Sbjct: 181 LNDNNSEFVAFGGLFDYSDQSYDPAGDSELLWRPESLPAL 217

The following BLAST results are available for this feature:

BLAST of CsGy1G003670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63814.1	2.9e-109	100.00	hypothetical protein Csa_1G022530 [Cucumis sativus]	[more]
XP_008453684.1	9.1e-95	91.71	PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]	[more]
XP_023516749.1	7.0e-63	68.49	uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]	[more]
XP_022921385.1	2.0e-62	68.69	uncharacterized protein LOC111429674 [Cucurbita moschata]	[more]
XP_023531746.1	1.0e-45	55.98	uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747....	[more]

BLAST of CsGy1G003670.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13360.1	4.9e-10	37.24	unknown protein	[more]
AT3G25870.1	5.1e-07	45.31	unknown protein	[more]

BLAST of CsGy1G003670.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G003670.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LS21\|A0A0A0LS21_CUCSA	1.9e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1	[more]
tr\|A0A1S3BWV1\|A0A1S3BWV1_CUCME	6.0e-95	91.71	uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=...	[more]
tr\|A0A2P6P3M3\|A0A2P6P3M3_ROSCH	1.4e-22	41.00	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0185281 PE=4...	[more]
tr\|A0A2I0HIP4\|A0A2I0HIP4_PUNGR	9.8e-21	45.68	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_048126 PE=4 SV=1	[more]
tr\|A0A2P4KPA4\|A0A2P4KPA4_QUESU	1.1e-19	38.18	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78493 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G003670	CsGy1G003670	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G003670.1.CDS.1	CsGy1G003670.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G003670.1.exon.1	CsGy1G003670.1.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G003670.1	CsGy1G003670.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34539	FAMILY NOT NAMED	coord: 6..203