CsGy1G002960.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G002960.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription factor TCP5
Location	Chr1 : 1848786 .. 1850012 (+)
Sequence length	1227

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAG

mRNA sequence

ATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAG

Coding sequence (CDS)

ATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAG

Protein sequence

MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKSTDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS

Homology

[Close]

BLAST of CsGy1G002960.1 vs. NCBI nr
Match: XP_011648477.1 (PREDICTED: transcription factor TCP5-like [Cucumis sativus] >KGN63734.1 hypothetical protein Csa_1G014310 [Cucumis sativus])

HSP 1 Score: 593.6 bits (1529), Expect = 5.2e-166
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180
           LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
           TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of CsGy1G002960.1 vs. NCBI nr
Match: XP_008453284.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 522.3 bits (1344), Expect = 1.5e-144
Identity = 382/412 (92.72%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDP     XXXXXXXXXXXXXXXXX      FMLDVK
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDP-----XXXXXXXXXXXXXXXXXXXXXXXFMLDVK 188

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 189 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 248

Query: 241 EQISSQKLLSMA-ICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           EQISSQKLLSMA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 249 EQISSQKLLSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of CsGy1G002960.1 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 325.9 bits (834), Expect = 2.0e-85
Identity = 221/412 (53.64%), Postives = 240/412 (58.25%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLR++   +KGCEAK+EG++         DGKYSFP+APT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRDSK--EKGCEAKQEGII---------DGKYSFPRAPT-SSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQM-LFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVK 180
           LPPLQIP GFS FH  M LFP   D                        SLP PF +D K
Sbjct: 121 LPPLQIPAGFSQFHHPMSLFPAQYD--------------YSSSSSSQFCSLPHPFAVDTK 180

Query: 181 -STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDY 240
            ST  +    T+EKTKLWD DL V Q+KA  A      TKGKWID  +N    +QQVEDY
Sbjct: 181 DSTTTHLNQTTMEKTKLWDTDL-VPQEKASLA------TKGKWIDHGSN----SQQVEDY 240

Query: 241 NEQISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           NEQIS+QK +S+    +N  N                                       
Sbjct: 241 NEQISAQKFISI----NNYSN--------------------------SYHYNTCDHQHSQ 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFM--S 360
                                      TPYASYITNPFESHIHFLSSNSHAL NPFM  +
Sbjct: 301 FGNNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPN 331

Query: 361 SSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           S L PF  SQNLKPF P +FNLKQL H             G S KDGA GNS
Sbjct: 361 SPLQPFG-SQNLKPF-PANFNLKQLLH------------DGGSGKDGADGNS 331

[Close]

BLAST of CsGy1G002960.1 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 320.5 bits (820), Expect = 8.4e-84
Identity = 237/408 (58.09%), Postives = 252/408 (61.76%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPTSSS QWSGFRNPRIVRVSRS
Sbjct: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPTSSS-QWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180
           LPPLQIP GFSPFHQ          XXXXXXXXXXXXXXXXXXXXXXNSLPPPF ++VK 
Sbjct: 121 LPPLQIPTGFSPFHQ-------XXXXXXXXXXXXXXXXXXXXXXXXXNSLPPPFAVNVKG 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
                ++  VEKTK+WDMDLA LQ KA S       TKGKWIDGS+N          YN 
Sbjct: 181 D---SSSTAVEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSNQHVEDYNFTPYNS 240

Query: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
             SSQ   +  +  S +                                           
Sbjct: 241 YNSSQFGNNNGVFPSQI------------------------------------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
                                    TPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 -----------EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 314

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFA SQNLKPF   SFN KQL HAAD N      GA  S KDGAAG+S
Sbjct: 361 PFA-SQNLKPFSAASFNFKQLLHAADGN------GADRSNKDGAAGDS 314

[Close]

BLAST of CsGy1G002960.1 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 232/408 (56.86%), Postives = 247/408 (60.54%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180
           LPPLQIP GFSPFH      Q    XXXXXXXXXXXXXXXXXXXX  NSLP PF +DVK 
Sbjct: 121 LPPLQIPTGFSPFH------QXXXXXXXXXXXXXXXXXXXXXXXXFCNSLPLPFAVDVKG 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
                 +  +EKTK+WDMDLA LQ KA S       TKGKW+DGS+N          YN 
Sbjct: 181 -----DSTAIEKTKIWDMDLA-LQGKASS------LTKGKWVDGSSNQHVEDYNFTPYNT 240

Query: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
             SSQ   +  +  S +                                           
Sbjct: 241 YNSSQFGNNNGVFPSQI------------------------------------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
                                    TPYASYITNPFESHIHFLSSN HALSNPF+ S+LH
Sbjct: 301 -----------EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVPSALH 313

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFA SQNLKPF   SFN KQL HAAD N      GA  S KDGAAG+S
Sbjct: 361 PFA-SQNLKPFSAASFNFKQLLHAADGN------GADRSNKDGAAGDS 313

[Close]

BLAST of CsGy1G002960.1 vs. TAIR10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39
Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQW-SGFRNPRIVRVSRS 61
           +R+   D++  +AK+E    ++   N N        +  SSSRQW S FRNPRIVRVSR+
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 62  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 121
           FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLL+  K D+D 
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

Query: 122 LPPLQIPPGFSPFHQQMLF 140
           LPPLQ P GF+  +  ++F
Sbjct: 121 LPPLQFPHGFNQMYPNLIF 139

[Close]

BLAST of CsGy1G002960.1 vs. TAIR10
Match: AT3G02150.2 (plastid transcription factor 1)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-33
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 6   SKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPT---SSSRQWSGFRNPRIVRVSRSFG 65
           ++ ++  +  +E   VR++S     GK    K PT   SSS  W   ++PRIVRVSR+FG
Sbjct: 19  TRREREVKEDQEETEVRATS-----GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFG 78

Query: 66  GKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLP 125
           GKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LP
Sbjct: 79  GKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELP 138

Query: 126 PLQI-PPGFSPFHQQMLF 140
           PL I P  FS F+    F
Sbjct: 139 PLPISPENFSIFNHHQSF 151

[Close]

BLAST of CsGy1G002960.1 vs. TAIR10
Match: AT5G08070.1 (TCP domain protein 17)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-33
Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 49  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 108
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 109 WLLDVTKLDIDNLPPLQIPPGF 131
           WLL+V K D+D LPPLQ PPGF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of CsGy1G002960.1 vs. TAIR10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 35  FPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDL 94
           F +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDL
Sbjct: 23  FSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDL 82

Query: 95  QDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125
           QD+L   QPSK ++WL++     I +LP L
Sbjct: 83  QDRLGFDQPSKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of CsGy1G002960.1 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-19
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 27  NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVP 86
           NNN+G     +     SR W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV 
Sbjct: 8   NNNNGDVVDNEVNNRLSR-WH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVS 67

Query: 87  TAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125
           TA+Q YDLQD+L   QPSK ++WL+   +  I  LP L
Sbjct: 68  TALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSL 103

[Close]

BLAST of CsGy1G002960.1 vs. Swiss-Prot
Match: sp|Q9FME3|TCP5_ARATH (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-38
Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQW-SGFRNPRIVRVSRS 61
           +R+   D++  +AK+E    ++   N N        +  SSSRQW S FRNPRIVRVSR+
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 62  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 121
           FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLL+  K D+D 
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

Query: 122 LPPLQIPPGFSPFHQQMLF 140
           LPPLQ P GF+  +  ++F
Sbjct: 121 LPPLQFPHGFNQMYPNLIF 139

[Close]

BLAST of CsGy1G002960.1 vs. Swiss-Prot
Match: sp|Q9S7W5|TCP13_ARATH (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.7e-32
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 6   SKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPT---SSSRQWSGFRNPRIVRVSRSFG 65
           ++ ++  +  +E   VR++S     GK    K PT   SSS  W   ++PRIVRVSR+FG
Sbjct: 19  TRREREVKEDQEETEVRATS-----GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFG 78

Query: 66  GKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLP 125
           GKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LP
Sbjct: 79  GKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELP 138

Query: 126 PLQI-PPGFSPFHQQMLF 140
           PL I P  FS F+    F
Sbjct: 139 PLPISPENFSIFNHHQSF 151

[Close]

BLAST of CsGy1G002960.1 vs. Swiss-Prot
Match: sp|Q9LEZ9|TCP17_ARATH (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.7e-32
Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 49  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 108
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 109 WLLDVTKLDIDNLPPLQIPPGF 131
           WLL+V K D+D LPPLQ PPGF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of CsGy1G002960.1 vs. Swiss-Prot
Match: sp|Q9C758|TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-19
Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 35  FPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDL 94
           F +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDL
Sbjct: 23  FSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDL 82

Query: 95  QDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125
           QD+L   QPSK ++WL++     I +LP L
Sbjct: 83  QDRLGFDQPSKAVEWLINAASDSITDLPLL 111

[Close]

BLAST of CsGy1G002960.1 vs. Swiss-Prot
Match: sp|Q93V43|TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 9.4e-18
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 27  NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVP 86
           NNN+G     +     SR W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV 
Sbjct: 8   NNNNGDVVDNEVNNRLSR-WH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVS 67

Query: 87  TAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 125
           TA+Q YDLQD+L   QPSK ++WL+   +  I  LP L
Sbjct: 68  TALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSL 103

[Close]

BLAST of CsGy1G002960.1 vs. TrEMBL
Match: tr|A0A0A0LRU6|A0A0A0LRU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 3.4e-166
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180
           LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKS 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
           TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 QISSQKLLSMAICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of CsGy1G002960.1 vs. TrEMBL
Match: tr|A0A1S3BX07|A0A1S3BX07_CUCME (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 9.7e-145
Identity = 382/412 (92.72%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDP     XXXXXXXXXXXXXXXXX      FMLDVK
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDP-----XXXXXXXXXXXXXXXXXXXXXXXFMLDVK 188

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 189 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 248

Query: 241 EQISSQKLLSMA-ICSSNLPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           EQISSQKLLSMA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 249 EQISSQKLLSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 308

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 309 XXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of CsGy1G002960.1 vs. TrEMBL
Match: tr|A0A2P4MNR5|A0A2P4MNR5_QUESU (Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.4e-48
Identity = 158/387 (40.83%), Postives = 188/387 (48.58%), Query Frame = 0


Query: 4   NNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGG 63
           +NS+ +K  +AK+EG          N  K S      SSSRQWSGFRNPRIVRVSRSFGG
Sbjct: 3   SNSR-EKDIQAKQEG--------EANAEKLS---KAASSSRQWSGFRNPRIVRVSRSFGG 62

Query: 64  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 123
           KDRHSKVCT+RGLRDRRIRLSVPTA+QLYDLQD+L LGQPSKVIDWLLD TKLDID LPP
Sbjct: 63  KDRHSKVCTVRGLRDRRIRLSVPTAVQLYDLQDRLGLGQPSKVIDWLLDATKLDIDKLPP 122

Query: 124 LQIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKSTDA 183
           L IP GF+ FH Q+   +                          N+  P F   + S DA
Sbjct: 123 LPIPQGFTQFHPQLFSHE-------------------------PNASQPSF---IPSFDA 182

Query: 184 YQTTM-------TVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVE 243
             T +        +EK+K WD+D A  + K+    T +   KGKWI    N+    + + 
Sbjct: 183 NPTFINDGADQNAMEKSKYWDID-AAFRLKSKEVETGSAANKGKWI--KTNEEVIQEGIG 242

Query: 244 DYNEQISSQKLLSMAICSS--NLPN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303
            Y+ QIS+QK   MA  SS  +LP                                    
Sbjct: 243 GYSGQISAQKFFPMATDSSSNSLPGLLNNAMAYNSHHHSEPSSLSLSQFGSHGLFPSQMN 302

Query: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPYASYITNPFES------HIHFLSSN 363
                                            TPY+SYIT P ES      HI FLSS+
Sbjct: 303 PHTSNAIQLPPSLPLLPASQFFFCPSTTTPALFTPYSSYITTPIESDPRQFNHIQFLSSS 344

Query: 364 S-HALSNPFMSSSLHPFATSQNLKPFP 373
           S H L +P M  SLH  + S  LK FP
Sbjct: 363 SQHVLPHPLMPPSLH--SMSLPLKSFP 344

[Close]

BLAST of CsGy1G002960.1 vs. TrEMBL
Match: tr|A0A1Q3C442|A0A1Q3C442_CEPFO (TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18328 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 122/248 (49.19%), Postives = 147/248 (59.27%), Query Frame = 0


Query: 9   QKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHS 68
           +K  EAK+E        ++ N+G++S      SSSRQW+GFRNPRIVRVSRSFGGKDRHS
Sbjct: 15  EKDTEAKQE--------DDTNEGRFS---KAASSSRQWTGFRNPRIVRVSRSFGGKDRHS 74

Query: 69  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPP 128
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKL L QPSKVIDWLLD TKLDID LPPLQ+P 
Sbjct: 75  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLDATKLDIDKLPPLQLPQ 134

Query: 129 GFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKST-DAYQTT 188
           GF  FHQQML      P                      + L     + + ST D  +  
Sbjct: 135 GFGQFHQQML------PHQSIASPSSLAPFFDANCGFHSSLLTGKEGIKIDSTADEGEDQ 194

Query: 189 MTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISSQKL 248
             + K+K WD+D  +   K         + KGKWI  S  ++    ++ DYN + S+QK 
Sbjct: 195 TVMAKSKYWDIDATLRVAKCKEIEREVMSEKGKWIKTSEQENQ--DEIGDYNGETSAQKF 243

Query: 249 LSMAICSS 256
             +   SS
Sbjct: 255 FPLGNPSS 243

[Close]

BLAST of CsGy1G002960.1 vs. TrEMBL
Match: tr|A0A061G4Y7|A0A061G4Y7_THECC (Teosinte branched 1, putative OS=Theobroma cacao OX=3641 GN=TCM_014288 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47
Identity = 130/253 (51.38%), Postives = 151/253 (59.68%), Query Frame = 0


Query: 5   NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGK 64
           +S  +K  +AK+EG          NDGK+S     +SSSRQWSGFRNPRIVRVSRSFGGK
Sbjct: 3   SSPREKDFQAKQEG--------ETNDGKFS---KGSSSSRQWSGFRNPRIVRVSRSFGGK 62

Query: 65  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPL 124
           DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ++L L QPSKVIDWLLD TK DID LPPL
Sbjct: 63  DRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLLDATKTDIDKLPPL 122

Query: 125 QIPPGFSPFHQQMLFPQYVDPXXXXXXXXXXXXXXXXXXXXXXNSLPPPFMLDVKSTDAY 184
           Q+PPGF  FHQQML P                           NS+   FM D +     
Sbjct: 123 QMPPGFGQFHQQMLVPH-----------ESNSSQSSLAPFFEANSM---FMKDGEDP--- 182

Query: 185 QTTMTVEKTKLWDMDLAVLQDKAGSATTAATTT--KGKWIDGSNNDSNSTQQVEDYNEQI 244
               ++   + WDMD A L+ K+      +TT   KGKWI  +    N    + DY+ Q 
Sbjct: 183 ----SIAAKRYWDMD-AALRAKSKEVERESTTAAEKGKWIKVTEQHENQ-DGIGDYSGQA 221

Query: 245 SSQKLLSMAICSS 256
           SSQK   +A  SS
Sbjct: 243 SSQKHFPVANHSS 221

The following BLAST results are available for this feature:

BLAST of CsGy1G002960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648477.1	5.2e-166	100.00	PREDICTED: transcription factor TCP5-like [Cucumis sativus] >KGN63734.1 hypothet...	[more]
XP_008453284.1	1.5e-144	92.72	PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: t...	[more]
XP_022135226.1	2.0e-85	53.64	transcription factor TCP5-like [Momordica charantia]	[more]
XP_022987421.1	8.4e-84	58.09	transcription factor TCP5-like [Cucurbita maxima]	[more]
XP_023516672.1	3.5e-82	56.86	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G002960.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60970.1	2.6e-39	60.43	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.2	3.7e-33	55.80	plastid transcription factor 1	[more]
AT5G08070.1	3.7e-33	80.49	TCP domain protein 17	[more]
AT1G30210.1	1.2e-20	56.67	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]
AT4G18390.1	5.2e-19	52.04	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

BLAST of CsGy1G002960.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FME3\|TCP5_ARATH	4.8e-38	60.43	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
sp\|Q9S7W5\|TCP13_ARATH	6.7e-32	55.80	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
sp\|Q9LEZ9\|TCP17_ARATH	6.7e-32	80.49	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
sp\|Q9C758\|TCP24_ARATH	2.2e-19	56.67	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
sp\|Q93V43\|TCP2_ARATH	9.4e-18	52.04	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of CsGy1G002960.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRU6\|A0A0A0LRU6_CUCSA	3.4e-166	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1	[more]
tr\|A0A1S3BX07\|A0A1S3BX07_CUCME	9.7e-145	92.72	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
tr\|A0A2P4MNR5\|A0A2P4MNR5_QUESU	8.4e-48	40.83	Transcription factor tcp5 OS=Quercus suber OX=58331 GN=CFP56_57361 PE=4 SV=1	[more]
tr\|A0A1Q3C442\|A0A1Q3C442_CEPFO	1.4e-47	49.19	TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1832...	[more]
tr\|A0A061G4Y7\|A0A061G4Y7_THECC	1.9e-47	51.38	Teosinte branched 1, putative OS=Theobroma cacao OX=3641 GN=TCM_014288 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G002960	CsGy1G002960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G002960.1.exon.1	CsGy1G002960.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G002960.1.CDS.1	CsGy1G002960.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G002960.1	CsGy1G002960.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 63..225 e-value: 7.6E-23 score: 81.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..408
None	No IPR available	PANTHER	PTHR31072:SF24	SUBFAMILY NOT NAMED	coord: 6..384
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 6..384
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 63..121 score: 26.103