CsGy1G001380.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G001380.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	diphthine methyltransferase
Location	Chr1 : 846360 .. 847775 (+)
Sequence length	858

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCGCTCACTGCACTCTGGACGGCAATGCTGATGGAGTGGAGTTTTGCCCTCACAGTTCATTTAGTAACGTTCTTGCTGCTTCCACTTATACACTACAAGAGGGTGAGCAGCCCAGTCGTTCTGGAAGCCTATCAATCTTCAATATCAATGCAGATATTGGCTCTTTGGAGCTGCTTCATCGTGTGGAAACGGCGGGGATCTTTGATATAAAGTGGAGCTCTGTTGGTCAGACCGCAAGTCCTCTGCTTGCTCAAGCAGATGCTGATGGCTGTCTCAGAATTCATGCGCTTGAGTGCTCTTCAAATGGTGTAGAAGGTATCGAAATTGGAAACTTTTTTGTCATACTTTTTGGAAATATATGTGGGAATGGAGATGTTTAGTGTACTAGATTATAGATGCTATTCGAGACTGAGTTAAACACAAGACACTGATGACCGGAGAATTAGTCTGTCTTTCCTCTAACAACGACAGACTTCAAGTTTTGCCATTCATTCTAAATTGTCCCATGAAAATTATGCTGGAATGTATGTAATCAAAAGCTCGTTGGTTGTGGCTAATATAATTATATCACTGAGTTCTTTAAATTGATCAACGAATGAGTGTGAGCTAATGAATTTTCATCAAGTATGAAGTATGAACTCCAAAGAAAGTGATAGGTGCAAACAAAGTCCCTCACTGGTTAGAAATGGAATTGATTAAGGGTATATAAATAAGGACAACTATTTCTATTGGTATAAGGTATTTCTTTTGACTCAAATTACCTTTCAATTTTCGTGACTGCAAGACTTTCACCTTTAGATTGAAGTATATAGCTTCCAAGCTTCTGCCTCTTTTTCTACTATTTAAGTTCTTGACGATCTCTTCTTGGTGCAGGAGAATATTGTTTAAAAGAGAAATGTGGCAGCAAAATTTCGTCCTCAATGTGTCTTTGCCTGGATTGGAATACTTCGGCCTCATCCATCTCTGTCGGGCATTCAGATGGTTCTATCTCAATACTCTCTGCAGGAGAATCCCATTTAGAAGTCCAAAACCAATGGAAAGCTCACGAGTTTGAGCTTTGGGCAACCTCTTTTGACACACACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTTAGCTGTTGGGATTTGCGAGACACTCCTTCCAAAGTTTTTCATAACACCAAAGTCCACAAAATGGGTGTTTGTTGCATTGCCAAAATTCCCAATGACCCTTACAAGTTACTCACTGGAAGCTACGATGAAAACCTGAGAGTGTGGGACATACGAGCAATCTCAAAGCCCATAAATGAAACTTCAATCTGCTTGGGCGGTGGCGTCTGGAAAATCAAGCCCCACCTTCAGTTTCTGACGTTGTTCTGGCTGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTAA

mRNA sequence

ATGGATGTCGCTCACTGCACTCTGGACGGCAATGCTGATGGAGTGGAGTTTTGCCCTCACAGTTCATTTAGTAACGTTCTTGCTGCTTCCACTTATACACTACAAGAGGGTGAGCAGCCCAGTCGTTCTGGAAGCCTATCAATCTTCAATATCAATGCAGATATTGGCTCTTTGGAGCTGCTTCATCGTGTGGAAACGGCGGGGATCTTTGATATAAAGTGGAGCTCTGTTGGTCAGACCGCAAGTCCTCTGCTTGCTCAAGCAGATGCTGATGGCTGTCTCAGAATTCATGCGCTTGAGTGCTCTTCAAATGGTGTAGAAGGAGAATATTGTTTAAAAGAGAAATGTGGCAGCAAAATTTCGTCCTCAATGTGTCTTTGCCTGGATTGGAATACTTCGGCCTCATCCATCTCTGTCGGGCATTCAGATGGTTCTATCTCAATACTCTCTGCAGGAGAATCCCATTTAGAAGTCCAAAACCAATGGAAAGCTCACGAGTTTGAGCTTTGGGCAACCTCTTTTGACACACACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTTAGCTGTTGGGATTTGCGAGACACTCCTTCCAAAGTTTTTCATAACACCAAAGTCCACAAAATGGGTGTTTGTTGCATTGCCAAAATTCCCAATGACCCTTACAAGTTACTCACTGGAAGCTACGATGAAAACCTGAGAGTGTGGGACATACGAGCAATCTCAAAGCCCATAAATGAAACTTCAATCTGCTTGGGCGGTGGCGTCTGGAAAATCAAGCCCCACCTTCAGTTTCTGACGTTGTTCTGGCTGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTAA

Coding sequence (CDS)

ATGGATGTCGCTCACTGCACTCTGGACGGCAATGCTGATGGAGTGGAGTTTTGCCCTCACAGTTCATTTAGTAACGTTCTTGCTGCTTCCACTTATACACTACAAGAGGGTGAGCAGCCCAGTCGTTCTGGAAGCCTATCAATCTTCAATATCAATGCAGATATTGGCTCTTTGGAGCTGCTTCATCGTGTGGAAACGGCGGGGATCTTTGATATAAAGTGGAGCTCTGTTGGTCAGACCGCAAGTCCTCTGCTTGCTCAAGCAGATGCTGATGGCTGTCTCAGAATTCATGCGCTTGAGTGCTCTTCAAATGGTGTAGAAGGAGAATATTGTTTAAAAGAGAAATGTGGCAGCAAAATTTCGTCCTCAATGTGTCTTTGCCTGGATTGGAATACTTCGGCCTCATCCATCTCTGTCGGGCATTCAGATGGTTCTATCTCAATACTCTCTGCAGGAGAATCCCATTTAGAAGTCCAAAACCAATGGAAAGCTCACGAGTTTGAGCTTTGGGCAACCTCTTTTGACACACACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTTAGCTGTTGGGATTTGCGAGACACTCCTTCCAAAGTTTTTCATAACACCAAAGTCCACAAAATGGGTGTTTGTTGCATTGCCAAAATTCCCAATGACCCTTACAAGTTACTCACTGGAAGCTACGATGAAAACCTGAGAGTGTGGGACATACGAGCAATCTCAAAGCCCATAAATGAAACTTCAATCTGCTTGGGCGGTGGCGTCTGGAAAATCAAGCCCCACCTTCAGTTTCTGACGTTGTTCTGGCTGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTAA

Protein sequence

MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLELLHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKISSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPHLVYTGSDDCKFSCWDLRDTPSKVFHNTKVHKMGVCCIAKIPNDPYKLLTGSYDENLRVWDIRAISKPINETSICLGGGVWKIKPHLQFLTLFWLLVCTMDLQLLE

Homology

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BLAST of CsGy1G001380.1 vs. NCBI nr
Match: XP_011656736.1 (PREDICTED: diphthine methyltransferase homolog [Cucumis sativus] >XP_011656781.1 PREDICTED: diphthine methyltransferase homolog [Cucumis sativus] >KGN63572.1 hypothetical protein Csa_1G004880 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 6.9e-125
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL
Sbjct: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI
Sbjct: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH
Sbjct: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRDTPSKV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LVYTGSDDCKFSCWDLRDTPSKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           XX ISKPINETSICLGGGVWKIKPH
Sbjct: 241 XXXISKPINETSICLGGGVWKIKPH 265

[Close]

BLAST of CsGy1G001380.1 vs. NCBI nr
Match: XP_008453090.1 (PREDICTED: diphthine methyltransferase [Cucumis melo] >XP_008453091.1 PREDICTED: diphthine methyltransferase [Cucumis melo] >XP_008453092.1 PREDICTED: diphthine methyltransferase [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 252/265 (95.09%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFN+NADIGSLEL
Sbjct: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNVNADIGSLEL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRVETAGIFDIKWS VGQTASPLLAQADADGCLRIHALECSSNGVEGEY LKEKCGSKI
Sbjct: 61  LHRVETAGIFDIKWSPVGQTASPLLAQADADGCLRIHALECSSNGVEGEY-LKEKCGSKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWAT+FDTHQPH
Sbjct: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATAFDTHQPH 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LVYTGSDDCKFSCWDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           XX  SKPINETSICLGGGVWKIKPH
Sbjct: 241 XXXXSKPINETSICLGGGVWKIKPH 264

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BLAST of CsGy1G001380.1 vs. NCBI nr
Match: XP_023531460.1 (diphthine methyltransferase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 5.1e-112
Identity = 221/265 (83.40%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNAD VEFCPHSSFSNVLAASTYTL EG+QPSRSGSLSIFN+NAD  SLEL
Sbjct: 16  MDVAHCTLDGNADAVEFCPHSSFSNVLAASTYTLLEGDQPSRSGSLSIFNVNADNCSLEL 75

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRV+TAGIFDIKWS VG TASPLLAQADADGC+R+HALE SSNG EG+Y LKE+CGSKI
Sbjct: 76  LHRVDTAGIFDIKWSPVGPTASPLLAQADADGCIRVHALEHSSNGAEGQY-LKERCGSKI 135

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWN SA+SISVGHSDGSISILSAGESHLEVQNQW+AHEFELWATSFDTHQPH
Sbjct: 136 SSSMCLCLDWNPSATSISVGHSDGSISILSAGESHLEVQNQWEAHEFELWATSFDTHQPH 195

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRDTP+K F                   XXXXXXXXXXXXXXXXX
Sbjct: 196 LVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCPNDXXXXXXXXXXXXXXXXX 255

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           X +ISKP NETSICLGGGVW+IKPH
Sbjct: 256 XRSISKPTNETSICLGGGVWRIKPH 279

[Close]

BLAST of CsGy1G001380.1 vs. NCBI nr
Match: XP_022928480.1 (diphthine methyltransferase [Cucurbita moschata])

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 221/265 (83.40%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNAD VEFCPHSSFSNVLAASTYTL EG+QPSRSGSLSIFN+NAD  SLEL
Sbjct: 16  MDVAHCTLDGNADAVEFCPHSSFSNVLAASTYTLLEGDQPSRSGSLSIFNVNADNCSLEL 75

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRV+TAGIFDIKWS VG TASPLLAQADADGC+R+HALE SSNG EG+Y LKE+CGSKI
Sbjct: 76  LHRVDTAGIFDIKWSPVGPTASPLLAQADADGCIRVHALEHSSNGGEGQY-LKERCGSKI 135

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWN SA+SISVGHSDGSISILSAGESHLEVQNQW+AHEFELWATSFDTHQPH
Sbjct: 136 SSSMCLCLDWNPSATSISVGHSDGSISILSAGESHLEVQNQWEAHEFELWATSFDTHQPH 195

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRDTP+K F                   XXXXXXXXXXXXXXXXX
Sbjct: 196 LVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCPNDXXXXXXXXXXXXXXXXX 255

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           X +ISKP NETSICLGGGVW+IKPH
Sbjct: 256 XRSISKPTNETSICLGGGVWRIKPH 279

[Close]

BLAST of CsGy1G001380.1 vs. NCBI nr
Match: XP_023004597.1 (diphthine methyltransferase [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 234/265 (88.30%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNAD VEFCPHSSFSNVLAASTYTL EG++PSRSG LSIFN+NAD  SLEL
Sbjct: 16  MDVAHCTLDGNADAVEFCPHSSFSNVLAASTYTLLEGDRPSRSGCLSIFNVNADDCSLEL 75

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRV+TAGIFDIKWS VGQT SPLLAQADADGC+R+HALE SSNG EG+Y LKE+CGSKI
Sbjct: 76  LHRVDTAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEGQY-LKERCGSKI 135

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWN SA+SISVGHSDGSIS+LSAGES LEVQNQWKAHEFELWATSFD HQPH
Sbjct: 136 SSSMCLCLDWNPSATSISVGHSDGSISLLSAGESRLEVQNQWKAHEFELWATSFDPHQPH 195

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRDTP+K F   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 196 LVYTGSDDCKFSCWDLRDTPTKAFHNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 255

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           XX+ISKP NETSICLGGGVW+IKPH
Sbjct: 256 XXSISKPTNETSICLGGGVWRIKPH 279

[Close]

BLAST of CsGy1G001380.1 vs. TAIR10
Match: AT5G63010.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 268.5 bits (685), Expect = 4.8e-72
Identity = 133/269 (49.44%), Postives = 177/269 (65.80%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNIN--ADIGSL 60
           MD A C L+GNAD VEFCPH S++N+LAASTYTLQEG+ PSRSGS+ +F++    D+G L
Sbjct: 1   MDAADCYLEGNADAVEFCPHESYANLLAASTYTLQEGDCPSRSGSVYLFDVGDVEDVG-L 60

Query: 61  ELLHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGS 120
            L+ +++TAG+FDI+WS  G      LAQADADGCL ++ ++      E +  L+E  G 
Sbjct: 61  NLIQKIDTAGVFDIRWSRGGDGGDVALAQADADGCLIVYKID----ETESKGTLREVSGK 120

Query: 121 KISSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQ 180
           +ISSSMCLCLDW+ S++SI VG SDGS S++S  +S+LE   +WK H+FELW  SFD + 
Sbjct: 121 RISSSMCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNN 180

Query: 181 PHLVYTGSDDCKFSCWDLRDTP--SKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           P+LVYTGSDDCKFSCWD+RD+P  ++VF                                
Sbjct: 181 PNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETL 240

Query: 241 XXXXXXAISKPINETSICLGGGVWKIKPH 266
                 ++S+P+NETS+ LGGGVW+IK H
Sbjct: 241 RVWDTRSVSRPLNETSVSLGGGVWRIKHH 264

[Close]

BLAST of CsGy1G001380.1 vs. TAIR10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04
Identity = 31/125 (24.80%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 84  LLAQADADGCLRIHALECSSNGVEGEYC--LKEKCGSKISSSMCLCLDWNT-SASSISVG 143
           L A A    C+++       N      C  ++    SK+S     CL WN    + I+  
Sbjct: 385 LFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLS-----CLSWNKHEKNHIASS 444

Query: 144 HSDGSISI--LSAGESHLEVQNQWKAHEFELWATSFDTHQPHLVYTGSDDCKFSCWDLRD 203
             +G +++  ++  +S +E    ++ HE   W+  F   +P ++ +GSDDCK   W  R 
Sbjct: 445 DYEGIVTVWDVTTRQSLME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQ 500

[Close]

BLAST of CsGy1G001380.1 vs. Swiss-Prot
Match: sp|Q9CYU6|DPH7_MOUSE (Diphthine methyltransferase OS=Mus musculus OX=10090 GN=Dph7 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.8e-18
Identity = 66/219 (30.14%), Postives = 99/219 (45.21%), Query Frame = 0


Query: 12  ADGVEFCPHSSFSNVLAASTYTLQ--------EGEQPS-RSGSLSIFNINADIGSLELL- 71
           AD VE+CP   + ++LA  TY L+        +G +P  R G L +F+ +    +  LL 
Sbjct: 21  ADSVEWCPVEGYQHLLACGTYQLRAPRDQPALDGSEPQVRLGRLYLFSFSEHNTAKPLLE 80

Query: 72  -HRVETAGIFDIKWSSVGQTASPLLAQADADGCL-RIHALECSSNGVE----GEYCLKEK 131
             R +++ + D+KW  +  +   LL  A+A G +  +  +EC +N           L E 
Sbjct: 81  VQRRDSSAVLDMKWCHIPVSGHVLLGLANASGSIGLLRLMECENNSYTLQPISSLALDEN 140

Query: 132 CGSKISSSMCLCLDWNTSAS--------SISVGHSDGSISILSAGESHLEVQ--NQWKAH 191
           C       + L +DW+T  S         I    S G + +L   E   E+Q    W AH
Sbjct: 141 C-------LSLSMDWSTGKSVRAREQPLKIISSDSKGQLHLLMVNEGTAELQLVASWPAH 200

Query: 192 EFELWATSFDTHQPHLVYTGSDDCKFSCWDLRDTPSKVF 205
            FE W  +F+  Q  LVY+G DDC    WD R   + VF
Sbjct: 201 HFEAWIAAFNYWQTELVYSGGDDCLLRGWDTRMLGTPVF 232

[Close]

BLAST of CsGy1G001380.1 vs. Swiss-Prot
Match: sp|Q55C80|DPH7_DICDI (Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr85 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.8e-15
Identity = 59/213 (27.70%), Postives = 97/213 (45.54%), Query Frame = 0


Query: 8   LDGNADGVEFCPHSSFSNVLAASTYTLQEGE---QPSRSGSLSIFNINADIGSL------ 67
           LD  +D VEF P +  +N+    TY +++G+   +  R G                    
Sbjct: 11  LDYTSDSVEFYPFN--NNIFVCGTYEIEKGDTEYKERRKGKXXXXXXXXXXXXXXXXXXX 70

Query: 68  ----------ELLHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEG 127
                     E+ +    +GI D+KW++       +L    + G L I+  +      E 
Sbjct: 71  XXXXXXXLFKEIQNINFNSGILDMKWNN---NKDRILGVVMSKGELNIYQYD------EV 130

Query: 128 EYCLKEKCGSKISSS---MCLCLDWNTSASSISVGHSDGSISILSAGESHLEV--QNQWK 187
           E  L+ K  ++IS S   + L LDWN S   +    SDG+I +    + + +V  + +WK
Sbjct: 131 EKKLELKSSTEISLSNDILSLSLDWNKSGDKLICSFSDGNIGLFKVTKDYSKVTEEKRWK 190

Query: 188 AHEFELWATSFDTHQPHLVYTGSDDCKFSCWDL 197
           AH++E W  +F+ H   +V++G DDCKF  WDL
Sbjct: 191 AHDYEAWICAFNYHDESIVFSGGDDCKFKIWDL 212

[Close]

BLAST of CsGy1G001380.1 vs. TrEMBL
Match: tr|A0A0A0LS22|A0A0A0LS22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004880 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 4.6e-125
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL
Sbjct: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI
Sbjct: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH
Sbjct: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRDTPSKV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LVYTGSDDCKFSCWDLRDTPSKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           XX ISKPINETSICLGGGVWKIKPH
Sbjct: 241 XXXISKPINETSICLGGGVWKIKPH 265

[Close]

BLAST of CsGy1G001380.1 vs. TrEMBL
Match: tr|A0A1S3BVC6|A0A1S3BVC6_CUCME (diphthine methyltransferase OS=Cucumis melo OX=3656 GN=LOC103493910 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 7.8e-117
Identity = 252/265 (95.09%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFN+NADIGSLEL
Sbjct: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNVNADIGSLEL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
           LHRVETAGIFDIKWS VGQTASPLLAQADADGCLRIHALECSSNGVEGEY LKEKCGSKI
Sbjct: 61  LHRVETAGIFDIKWSPVGQTASPLLAQADADGCLRIHALECSSNGVEGEY-LKEKCGSKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWAT+FDTHQPH
Sbjct: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATAFDTHQPH 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LVYTGSDDCKFSCWDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
           XX  SKPINETSICLGGGVWKIKPH
Sbjct: 241 XXXXSKPINETSICLGGGVWKIKPH 264

[Close]

BLAST of CsGy1G001380.1 vs. TrEMBL
Match: tr|A0A2I4G1H2|A0A2I4G1H2_9ROSI (diphthine methyltransferase homolog OS=Juglans regia OX=51240 GN=LOC109003873 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.1e-89
Identity = 163/265 (61.51%), Postives = 193/265 (72.83%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           M+VAHC LDGNAD VEFCPH ++ +VLAASTYTLQEG++PSRSGS+S+FN +A++G L+L
Sbjct: 1   MEVAHCYLDGNADCVEFCPHDAYHDVLAASTYTLQEGDRPSRSGSISLFNADANMGCLDL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
            HRV TAGIFD+KWS VG     +LAQADADGCLR + LE  S+G++G + LKEK G KI
Sbjct: 61  FHRVGTAGIFDMKWSPVGGNVGVMLAQADADGCLRTYNLERRSDGIKGSF-LKEKNGEKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SSSMCLCLDWN  A+SISVG SDGS+SI+S  ES +E++ +WKAH+FELWATSFD HQP 
Sbjct: 121 SSSMCLCLDWNPPATSISVGLSDGSVSIVSLSESKIEIREEWKAHDFELWATSFDIHQPQ 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVYTGSDDCKFSCWDLRD+P   F                                    
Sbjct: 181 LVYTGSDDCKFSCWDLRDSPKLAFQNTKVHKMGVCCIVKSPTDPNTLFTGCYDEYLRVWD 240

Query: 241 XXAISKPINETSICLGGGVWKIKPH 266
             +ISKP+NETSICLGGGVWKIKPH
Sbjct: 241 VRSISKPVNETSICLGGGVWKIKPH 264

[Close]

BLAST of CsGy1G001380.1 vs. TrEMBL
Match: tr|A0A251P9R5|A0A251P9R5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G171000 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.0e-89
Identity = 163/266 (61.28%), Postives = 192/266 (72.18%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHC LDGNAD VEFCPH S+ +VLAASTYTLQEG++PSR+GS+S+FN++AD+G L+L
Sbjct: 1   MDVAHCNLDGNADAVEFCPHDSYHHVLAASTYTLQEGDRPSRAGSISLFNVDADLGRLDL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
            HR+ETAGIFDIKW+ VG + SPLLAQADADG LRIH LEC S+     + L+E    KI
Sbjct: 61  FHRIETAGIFDIKWNPVGGSVSPLLAQADADGYLRIHGLECCSDEARAGFSLREITDEKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SS+MCLCLDWN SA+SI+VG SDGS+SI S  ES LE Q  WKAH+FE+WA SFDTHQP 
Sbjct: 121 SSAMCLCLDWNPSATSITVGLSDGSVSIASIVESQLETQELWKAHDFEVWAASFDTHQPQ 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKV-FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVY+GSDDCKFSCWDLRD PSK+ F                                   
Sbjct: 181 LVYSGSDDCKFSCWDLRDCPSKLAFQNTKVHTMGVCCIVKNPNDPNTVLTGSYDEYLRVW 240

Query: 241 XXXAISKPINETSICLGGGVWKIKPH 266
              +IS+P+NETSICLGGGVW+IK H
Sbjct: 241 DVRSISRPVNETSICLGGGVWRIKYH 266

[Close]

BLAST of CsGy1G001380.1 vs. TrEMBL
Match: tr|M5WB39|M5WB39_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G171000 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 164/266 (61.65%), Postives = 193/266 (72.56%), Query Frame = 0


Query: 1   MDVAHCTLDGNADGVEFCPHSSFSNVLAASTYTLQEGEQPSRSGSLSIFNINADIGSLEL 60
           MDVAHC LDGNAD VEFCPH S+ +VLAASTYTLQEG++PSR+GS+S+FN++AD+G L+L
Sbjct: 1   MDVAHCNLDGNADAVEFCPHDSYHHVLAASTYTLQEGDRPSRAGSISLFNVDADLGRLDL 60

Query: 61  LHRVETAGIFDIKWSSVGQTASPLLAQADADGCLRIHALECSSNGVEGEYCLKEKCGSKI 120
            HR+ETAGIFDIKW+ VG + SPLLAQADADG LRIH LEC S+   G + L+E    KI
Sbjct: 61  FHRIETAGIFDIKWNPVGGSVSPLLAQADADGYLRIHGLECCSDEARG-FSLREITDEKI 120

Query: 121 SSSMCLCLDWNTSASSISVGHSDGSISILSAGESHLEVQNQWKAHEFELWATSFDTHQPH 180
           SS+MCLCLDWN SA+SI+VG SDGS+SI S  ES LE Q  WKAH+FE+WA SFDTHQP 
Sbjct: 121 SSAMCLCLDWNPSATSITVGLSDGSVSIASIVESQLETQELWKAHDFEVWAASFDTHQPQ 180

Query: 181 LVYTGSDDCKFSCWDLRDTPSKV-FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           LVY+GSDDCKFSCWDLRD PSK+ F                                   
Sbjct: 181 LVYSGSDDCKFSCWDLRDCPSKLAFQNTKVHTMGVCCIVKNPNDPNTVLTGSYDEYLRVW 240

Query: 241 XXXAISKPINETSICLGGGVWKIKPH 266
              +IS+P+NETSICLGGGVW+IK H
Sbjct: 241 DVRSISRPVNETSICLGGGVWRIKYH 265

The following BLAST results are available for this feature:

BLAST of CsGy1G001380.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656736.1	6.9e-125	99.25	PREDICTED: diphthine methyltransferase homolog [Cucumis sativus] >XP_011656781.1...	[more]
XP_008453090.1	1.2e-116	95.09	PREDICTED: diphthine methyltransferase [Cucumis melo] >XP_008453091.1 PREDICTED:...	[more]
XP_023531460.1	5.1e-112	83.40	diphthine methyltransferase [Cucurbita pepo subsp. pepo]	[more]
XP_022928480.1	1.1e-111	83.40	diphthine methyltransferase [Cucurbita moschata]	[more]
XP_023004597.1	1.1e-109	88.30	diphthine methyltransferase [Cucurbita maxima]	[more]

BLAST of CsGy1G001380.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63010.1	4.8e-72	49.44	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	5.6e-04	24.80	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of CsGy1G001380.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CYU6\|DPH7_MOUSE	3.8e-18	30.14	Diphthine methyltransferase OS=Mus musculus OX=10090 GN=Dph7 PE=2 SV=1	[more]
sp\|Q55C80\|DPH7_DICDI	8.8e-15	27.70	Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr8...	[more]

BLAST of CsGy1G001380.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LS22\|A0A0A0LS22_CUCSA	4.6e-125	99.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004880 PE=4 SV=1	[more]
tr\|A0A1S3BVC6\|A0A1S3BVC6_CUCME	7.8e-117	95.09	diphthine methyltransferase OS=Cucumis melo OX=3656 GN=LOC103493910 PE=4 SV=1	[more]
tr\|A0A2I4G1H2\|A0A2I4G1H2_9ROSI	3.1e-89	61.51	diphthine methyltransferase homolog OS=Juglans regia OX=51240 GN=LOC109003873 PE...	[more]
tr\|A0A251P9R5\|A0A251P9R5_PRUPE	4.0e-89	61.28	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G171000 PE=4 SV=1	[more]
tr\|M5WB39\|M5WB39_PRUPE	1.2e-88	61.65	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G171000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008168	methyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G001380	CsGy1G001380	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G001380.1.exon.1	CsGy1G001380.1.exon.1	exon
CsGy1G001380.1.exon.2	CsGy1G001380.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G001380.1.CDS.1	CsGy1G001380.1.CDS.1	CDS
CsGy1G001380.1.CDS.2	CsGy1G001380.1.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G001380.1	CsGy1G001380.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 155..195 e-value: 0.086 score: 22.0 coord: 57..98 e-value: 62.0 score: 5.7 coord: 113..150 e-value: 31.0 score: 7.6 coord: 200..240 e-value: 2.3E-4 score: 30.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 205..240 e-value: 0.0068 score: 17.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 207..242 score: 9.807
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 6..270 e-value: 3.5E-24 score: 87.3
None	No IPR available	PANTHER	PTHR22850	WD40 REPEAT FAMILY	coord: 32..277
None	No IPR available	PANTHER	PTHR22850:SF17	DIPHTHINE METHYLTRANSFERASE	coord: 32..277
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 227..241
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 162..249 score: 12.341
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 41..264