Cp4.1LG20g05980.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g05980.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Mitochondrial transcription termination factor family protein, putative
Location	Cp4.1LG20 : 3653355 .. 3655094 (-)
Sequence length	1740

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

mRNA sequence

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

Coding sequence (CDS)

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

Protein sequence

MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS

Homology

[Close]

BLAST of Cp4.1LG20g05980.1 vs. Swiss-Prot
Match: MTEFH_ARATH (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.7e-60
Identity = 151/515 (29.32%), Postives = 262/515 (50.87%), Query Frame = 1


Query: 69  EAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLD-SEKDVARSLRKYLRYNPIN 128
           +AQ+ + DYLH TRSL +  AE I+ N+   ++NLI+KLD S    ++SLRK+L Y+PIN
Sbjct: 36  KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95

Query: 129 EFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREI 188
           EFE FFES+G+  SE+  FLP +  F S+D  +L+    L  +G P +K+GK+YKE R +
Sbjct: 96  EFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLV 155

Query: 189 FAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI--GQIKMEFIKVLEKLSKLGIEE 248
           F    G + S+L  ++D+G     +I      P  L   G++  E   +  KL +L  E 
Sbjct: 156 FVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFDEF 215

Query: 249 DWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVR 308
           D    ++  ++  +W  +   +     +G    +M +L   N SL LE S + +      
Sbjct: 216 D--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKAGY 275

Query: 309 LVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGS 368
             + G+  ++A  +  +NP I++    K ++     L   GL  +++  +      + G 
Sbjct: 276 FCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVFGR 335

Query: 369 CTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQ------------ASC 428
             LK    V + + +  E +  I+++    L  LAS + +   E              + 
Sbjct: 336 NQLKNLPYVLRAIDL-HERIFDILKNGNHHL--LASYTLMDPDEDLEREYQEGLEELQNS 395

Query: 429 QNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIV 488
           +     ++K  FL ++G+ EN   + K  +   G   +L +RF  L+N+G+    +  ++
Sbjct: 396 RTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 455

Query: 489 RHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNME-RINTRFSMYRWLRDK 548
           R AP +LNQ    IQ+K+  L   +G  L  +  FP YLC+++E RI+ RF  ++WL +K
Sbjct: 456 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 515

Query: 549 GAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMW 568
           G ++ + S+++++A S+  F+     +HP  P  W
Sbjct: 516 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

[Close]

BLAST of Cp4.1LG20g05980.1 vs. Swiss-Prot
Match: MTEFE_ARATH (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.3e-06
Identity = 33/115 (28.70%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 449 GDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAF 508
           G +++ R DCL   GL       +V   P V+    + I++KI+ L N +G+ ++ +A  
Sbjct: 282 GFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADV 341

Query: 509 PVYLCYNMER-INTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 563
           P YL  N+++ I  R+++  +L+ KG    ++ L  ++  S  RF   +V  +PE
Sbjct: 342 PEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 396

[Close]

BLAST of Cp4.1LG20g05980.1 vs. Swiss-Prot
Match: MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.0e-06
Identity = 40/135 (29.63%), Postives = 65/135 (48.15%), Query Frame = 1


Query: 422 KTTFLLKLGYVENSDELAKASKQF-RGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 481
           K  FL+K+GY   + ELA A     R   D +Q      ++ GL    +  +    P VL
Sbjct: 361 KLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVL 420

Query: 482 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNME-RINTRFSMYRWLRDKGAAKPNL 541
             +   ++EK++ L   +G  +  + AFP +L Y ++ RI  R+     L+ +G    N+
Sbjct: 421 QYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG---ENM 480

Query: 542 SLSTVLACSDARFVK 555
           SL+ +L  S  RF K
Sbjct: 481 SLNKLLTVSAERFSK 490

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL
Match: V4U7M9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014682mg PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 3.4e-222
Identity = 381/575 (66.26%), Postives = 461/575 (80.17%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKT-ITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT- 60
           MITQ+NH L F PV +EKT I Q  N  F+  + R FC+      P+ SL ES Q P + 
Sbjct: 16  MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75

Query: 61  -GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSL 120
              RVSR ARTEAQ+VLFDYLH TRSLG+ DAEHISKNSP F+ NL+ K+DS KDV RSL
Sbjct: 76  VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135

Query: 121 RKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKM 180
            ++LRYNPINEFEPFFESLGL  SEL   LPR LMFLSDD ++L+NFHVLC+YGIPRSKM
Sbjct: 136 TRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195

Query: 181 GKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEK 240
           GKMY EA EIF +D G+LASKL AYE+LGL   T+IKLVSCCPSLLIG +   F+KVLEK
Sbjct: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255

Query: 241 LSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGK 300
           L +LG + DWIG Y+S K +YNW+++ +TLDFL K+GY E+Q+ +LFK+NP+L+ E SG+
Sbjct: 256 LKELGFKNDWIGRYLSGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315

Query: 301 KVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVS 360
           KVYVLF RL+KLGLKM+E YS++ QNP ILS K+VKN+L+AV FL +IG+G +DI+ +V 
Sbjct: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375

Query: 361 HQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPA 420
               L+GSC+LKGPKTVC +LKVG+E LC II+DDP KLF LASK+++K  EQ  CQNP+
Sbjct: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435

Query: 421 KEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAP 480
           K++EKT FLL+LGYVENS+E+ KA KQFRGRGDQLQERFDCLV AGLD +VV NIV+ AP
Sbjct: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495

Query: 481 MVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKP 540
           MVLNQSKDV+++KID L+N L YPL ++ AFP YLCY+M RIN R  MY WLR++G AKP
Sbjct: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555

Query: 541 NLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
            LSLST+LACSDA+F KYFVDVHPEGP+MWES KK
Sbjct: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL
Match: A0A067GCM4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007621mg PE=4 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 1.3e-221
Identity = 380/575 (66.09%), Postives = 460/575 (80.00%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKT-ITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT- 60
           MITQ+NH L F PV +EKT I Q  N  F+  + R FC+      P+ SL ES Q P + 
Sbjct: 16  MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75

Query: 61  -GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSL 120
              RVSR ARTEAQ+VLFDYLH TRSLG+ DAEHISKNSP F+ NL+ K+DS KDV RSL
Sbjct: 76  VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135

Query: 121 RKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKM 180
            ++LRYNPINEFEPFFESLGL  SEL   LPR LMFLSDD ++L+NFHVLC+YGIPRSKM
Sbjct: 136 MRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195

Query: 181 GKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEK 240
           GKMY EA EIF +D G+LASKL AYE+LGL   T+IKLVSCCPSLLIG +   F+KVLEK
Sbjct: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255

Query: 241 LSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGK 300
           L +LG + DWIG Y+  K +YNW+++ +TLDFL K+GY E+Q+ +LFK+NP+L+ E SG+
Sbjct: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315

Query: 301 KVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVS 360
           KVYVLF RL+KLGLKM+E YS++ QNP ILS K+VKN+L+AV FL +IG+G +DI+ +V 
Sbjct: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375

Query: 361 HQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPA 420
               L+GSC+LKGPKTVC +LKVG+E LC II+DDP KLF LASK+++K  EQ  CQNP+
Sbjct: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435

Query: 421 KEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAP 480
           K++EKT FLL+LGYVENS+E+ KA KQFRGRGDQLQERFDCLV AGLD +VV NIV+ AP
Sbjct: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495

Query: 481 MVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKP 540
           MVLNQSKDV+++KID L+N L YPL ++ AFP YLCY+M RIN R  MY WLR++G AKP
Sbjct: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555

Query: 541 NLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
            LSLST+LACSDA+F KYFVDVHPEGP+MWES KK
Sbjct: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL
Match: M5WPG4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003449mg PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 4.9e-221
Identity = 381/573 (66.49%), Postives = 459/573 (80.10%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT-- 60
           MI+QLNHL+ F+PV    T  Q  NPS VS K + FC+     H + S+IES QSP +  
Sbjct: 1   MISQLNHLVLFSPVFERTTFVQ--NPSSVSLKFQCFCSSRLTHHSKVSVIESAQSPNSPF 60

Query: 61  GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLR 120
             RVSR ARTEAQ  LFDYLHCTRS  F DAEHISKNSP FLQNL+  +DSEKDVARSL 
Sbjct: 61  ANRVSRNARTEAQATLFDYLHCTRSFSFTDAEHISKNSPIFLQNLLSNIDSEKDVARSLT 120

Query: 121 KYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMG 180
           ++LRYNPINEFEPFFESLGL PSEL  FLPR LM+LSDD ++ +N H LCNYGIPRS +G
Sbjct: 121 RFLRYNPINEFEPFFESLGLSPSELLSFLPRHLMYLSDDCVLTDNVHALCNYGIPRSNIG 180

Query: 181 KMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKL 240
           KMYKEA+EIF YDYG+LA KL+AYE+LG+   T+IKLVSCCP LL+G +  +F++V EKL
Sbjct: 181 KMYKEAKEIFGYDYGVLALKLQAYENLGISKATVIKLVSCCPLLLVGGVNSDFVRVHEKL 240

Query: 241 SKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKK 300
            +LG+  DWIGGY S  STYNW+R+ DT+DFL KVGYTE QM  LF+ NP+LLLE SGK 
Sbjct: 241 KRLGLGMDWIGGYASGNSTYNWDRMFDTMDFLDKVGYTEEQMCVLFELNPALLLEGSGKN 300

Query: 301 VYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSH 360
           VYVLF RL+KLGL+M+E YS++ QNP +LS K +KN+L AVDFLF+IG+GTE++A IV++
Sbjct: 301 VYVLFGRLLKLGLEMNEVYSLFMQNPQVLSVKCMKNLLLAVDFLFEIGMGTEEMADIVAN 360

Query: 361 QILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK 420
            +  L S + K PKTVCK+LKV ++GL  +I++DP K+ TLASKSK K+  Q     P+K
Sbjct: 361 DVEFLSSSSFKRPKTVCKDLKVKRDGLLQMIKEDPHKVLTLASKSKGKN--QLISPLPSK 420

Query: 421 EMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPM 480
            MEKT+FL++LGY+ENSDE+ KA K+FRGRGDQLQERFDCLV AGLDC+VV+NIV+ AP 
Sbjct: 421 HMEKTSFLVRLGYIENSDEMMKALKKFRGRGDQLQERFDCLVQAGLDCNVVSNIVKQAPH 480

Query: 481 VLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPN 540
           VLNQSKDVI+ KI CL NCL YPL ++ AFP YLCY+M+RIN RFSMY WLR+KGAAKP 
Sbjct: 481 VLNQSKDVIEMKISCLTNCLRYPLDSVVAFPAYLCYDMDRINLRFSMYAWLREKGAAKPM 540

Query: 541 LSLSTVLACSDARFVKYFVDVHPEGPSMWESCK 572
           LSLST+LACSDARFVKY+VDVHPEGP+MWES K
Sbjct: 541 LSLSTLLACSDARFVKYYVDVHPEGPAMWESFK 569

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL
Match: A0A061GDK1_THECC (Mitochondrial transcription termination factor family protein, putative OS=Theobroma cacao GN=TCM_029329 PE=4 SV=1)

HSP 1 Score: 770.4 bits (1988), Expect = 1.6e-219
Identity = 381/579 (65.80%), Postives = 467/579 (80.66%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTG- 60
           MIT L+  +  +P++ EK+    HN   VS + R F +      P+ASL +S +S ++G 
Sbjct: 16  MITHLDKFVVLSPIVYEKSDV-VHNLCSVSLRVRYFRSSRLVFRPKASLADSIRSSSSGF 75

Query: 61  -GRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLR 120
             R+SR A+TEAQ VLFDYLH TRS  F DAEHISKNS HFLQNL+ K+D EKDVA+SL 
Sbjct: 76  ASRISRAAKTEAQVVLFDYLHSTRSFRFMDAEHISKNSHHFLQNLLSKIDPEKDVAKSLT 135

Query: 121 KYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMG 180
           K+LR+NP+NEFEPFFESLGL PSE+   +P+RLMFL DD +ML+NFHVLC+YGIPRSKMG
Sbjct: 136 KFLRFNPVNEFEPFFESLGLSPSEVSTLVPQRLMFLRDDSVMLDNFHVLCDYGIPRSKMG 195

Query: 181 KMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKL 240
           KMYK AREIF YDYG+LA KL+AYE+LGL   T+IKLVSCCPSLL+G +  EF   LE+L
Sbjct: 196 KMYKVAREIFGYDYGVLALKLQAYENLGLSKPTVIKLVSCCPSLLVGGVDAEFAGALERL 255

Query: 241 SKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKK 300
             LGI+ D IGGY+S K  Y+W R++D L+FL +VGY E Q+ +LFK+NP+LL E SGKK
Sbjct: 256 KVLGIKNDDIGGYLSGKGMYDWGRMLDMLNFLDRVGYNEEQLGNLFKTNPALLFEGSGKK 315

Query: 301 VYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSH 360
           VYVLF RL+KLGL+M+E +S++ QNP ILS K  KN+ +A+DFLFDI + TEDIA IVS 
Sbjct: 316 VYVLFGRLIKLGLRMNEVHSLFMQNPHILSVKCTKNLFKALDFLFDIAMDTEDIAHIVSR 375

Query: 361 QILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK 420
            + L+GSC+LKGPKTVC+EL V KE LCLII++DP K F+LASKSK+ SS Q + ++ +K
Sbjct: 376 HVELMGSCSLKGPKTVCRELNVEKEELCLIIKEDPLKWFSLASKSKVLSSGQVASKDTSK 435

Query: 421 EMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPM 480
            +EKTTFLL+LGY+ENSDE+ KA KQFRGRGDQLQERFDCLV AGLDC+VV N++RHAPM
Sbjct: 436 YLEKTTFLLRLGYLENSDEMLKALKQFRGRGDQLQERFDCLVCAGLDCNVVKNLIRHAPM 495

Query: 481 VLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPN 540
           VLNQSKDVI++KIDCL+N LGYPL ++ AFP YLCY+MERI+ RFSMY WLR++GAAKP 
Sbjct: 496 VLNQSKDVIEKKIDCLKNWLGYPLESVVAFPAYLCYDMERISRRFSMYVWLRERGAAKPM 555

Query: 541 LSLSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHN 578
           LSLSTVLACSDARFVKYFVDVHPEGP+ WE+ KK  LH+
Sbjct: 556 LSLSTVLACSDARFVKYFVDVHPEGPAKWETLKK-SLHS 592

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL
Match: W9QRR9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006241 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 2.3e-207
Identity = 361/571 (63.22%), Postives = 443/571 (77.58%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MI+QLN +  F+PVL E+  +   NPSF+S +        F     +SL  S        
Sbjct: 1   MISQLNQIPLFSPVLYERA-SYIQNPSFISLR--------FLSVRSSSLAHSADV----S 60

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSR  RTEAQ+ LFDYLHCTR+  F DAEHISKN P+F+QNL+ ++D+EKD+ R L ++
Sbjct: 61  RVSRVTRTEAQEALFDYLHCTRNFNFMDAEHISKNCPYFVQNLLSEIDTEKDIPRELTRF 120

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
             Y+PINEFEPFFESLGL PSELPL LPR  MFLSD+  ML+NFHVLC+YGIP SK+G+M
Sbjct: 121 FHYHPINEFEPFFESLGLRPSELPLLLPRDSMFLSDNSSMLQNFHVLCDYGIPHSKIGRM 180

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           Y EA+EIF YD G+++ KLRAYE LGL   T+IKLVSC P LL+G +  EF+KVL+KL +
Sbjct: 181 YLEAKEIFGYDKGVMSLKLRAYEKLGLSRPTVIKLVSCYPLLLVGGVNSEFVKVLQKLRE 240

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIE DW  GYI+  +T NW R+ DT+DFL  VG+ E QM  L K++PSLLLE SGK+VY
Sbjct: 241 LGIENDWFRGYITSSNTCNWKRMTDTMDFLQDVGFREEQMRSLLKTSPSLLLEGSGKRVY 300

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
            LF RL+KLGL+M+E   ++KQNP ILS K+ +N+L+AVDFLF IG+  EDIA IVS  I
Sbjct: 301 ALFGRLLKLGLEMNEICFMFKQNPKILSRKFSQNLLQAVDFLFGIGMPIEDIADIVSKHI 360

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
             LGS TLKGPKTVCKELKV ++ LC II++DP  +  LASK K KSSEQ SC +P+K +
Sbjct: 361 EFLGSSTLKGPKTVCKELKVRRDHLCQIIKEDPLGVLWLASKLKNKSSEQISCPSPSKHL 420

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EK++FL++LGY ENSDE+ KA K+FRGRGDQLQERFDCLV AGLDC+VV +I++ APMVL
Sbjct: 421 EKSSFLVRLGYAENSDEMTKALKKFRGRGDQLQERFDCLVQAGLDCNVVADIIKRAPMVL 480

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVI++KIDCL N LGYPL ++ AFP YLCY+MERIN RFSMY WLR+KGAAKP L 
Sbjct: 481 NQSKDVIEKKIDCLINYLGYPLESVVAFPTYLCYDMERINLRFSMYAWLREKGAAKPMLK 540

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCK 572
           LST+LACSD+RF+KYFVDVHPEGP+MWE+ K
Sbjct: 541 LSTLLACSDSRFLKYFVDVHPEGPAMWETLK 558

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10
Match: AT4G19650.1 (AT4G19650.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 577.8 bits (1488), Expect = 7.5e-165
Identity = 280/481 (58.21%), Postives = 363/481 (75.47%), Query Frame = 1


Query: 90  EHISKNSPHFLQNLIMKLD-SEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELPLFLP 149
           EHISKNSP F+  L+ K+D ++KDV++ L K+LRYNPINEFEPFFESLGL P E   FLP
Sbjct: 90  EHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLP 149

Query: 150 RRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLG 209
           R+LMFLSDD +M ENFH LCNYGIPR K+G+MYKEAREIF Y+ G+LA KLR YE+LGL 
Sbjct: 150 RKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLS 209

Query: 210 MGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLD 269
             T+IKLV+ CP LL+G I  EF  V++KL  L +  DW+G Y+S + TY+W R+++T++
Sbjct: 210 KATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIE 269

Query: 270 FLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILS 329
           FL KVG  E ++  L K+ P+L++E SGKK YVLF RL K GL+++E Y ++  NP +LS
Sbjct: 270 FLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLS 329

Query: 330 GKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLI 389
            K VKNI + +DFL  I + T+ I  I+   + L+GSC+L  P+T C  L V ++ LC I
Sbjct: 330 DKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKI 389

Query: 390 IRDDPSKLFTLASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGR 449
           ++ +P +LF   S +K + S+  S ++  K +EKT FLL+LGYVENSDE+ KA KQFRGR
Sbjct: 390 LKKEPLRLFCFVSTTKKRKSKPLS-EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGR 449

Query: 450 GDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAF 509
           GDQLQERFDCLV AGL+ +VVT I+RHAPM+LN SKDVI++KI  L   LGYP+ ++  F
Sbjct: 450 GDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRF 509

Query: 510 PVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWE 569
           P YLCY+M+RI+ RFSMY WLR++ AAKP LS ST+L C DARFVKYFV+VHPEGP++WE
Sbjct: 510 PAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWE 569

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10
Match: AT5G45113.1 (AT5G45113.1 mitochondrial transcription termination factor-related / mTERF-related)

HSP 1 Score: 399.1 bits (1024), Expect = 4.8e-111
Identity = 197/413 (47.70%), Postives = 281/413 (68.04%), Query Frame = 1


Query: 160 MLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCC 219
           M ENFHVLC YGIPR K+G++YKEAREIF Y+ G+LASKL  YE L L    +IKLV+CC
Sbjct: 1   MFENFHVLCYYGIPRDKIGRLYKEAREIFVYENGVLASKLEPYEILVLRKAIVIKLVTCC 60

Query: 220 PSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQ 279
           P LL+G I  EF+ V+ KL  L +  DW+  Y+S + TYNW R+++T++ L KVG+ E +
Sbjct: 61  PLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKK 120

Query: 280 MHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAV 339
           + +L K+ P L+ E SG K Y++F +  K+GL+M+E   +   N  +L  K VK IL A+
Sbjct: 121 LSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLLEKSVKRILEAL 180

Query: 340 DFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTL 399
            FL  I +  + +   +   +  + S +L  P+ V   LK+ ++ LC II+++P +LF++
Sbjct: 181 KFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQIIKEEPLRLFSI 240

Query: 400 ASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCL 459
           ASK+     E  S    ++  EKTTFLLKLGYVENSDE+ +A K+F+GRGD+LQERFDC 
Sbjct: 241 ASKTNKGRIELDSLD--SRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGDELQERFDCF 300

Query: 460 VNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERI 519
           V AGLD +VV+ +V+ AP +LN+ KD+I++KI  L + L YP+ ++   P YLCY+M+RI
Sbjct: 301 VKAGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPTYLCYSMKRI 360

Query: 520 NTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
           + RF+MY WLR++ A  P L+L TV+  S+   V YFV+ HPEGP+ WE+ KK
Sbjct: 361 HQRFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPATWENIKK 411

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10
Match: AT5G06810.1 (AT5G06810.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 396.0 bits (1016), Expect = 4.1e-110
Identity = 217/550 (39.45%), Postives = 319/550 (58.00%), Query Frame = 1


Query: 32   KSRLFCNYGFDIHPRASLIESPQSPTTGGRVSRYARTEAQKVLFDYLHCTRSLGFADAEH 91
            K +L  N  F    RA +         G R     R  AQ  +FDY + TR L F  AE 
Sbjct: 588  KPQLSRNPRFFATQRALVDAEVSGEKWGLRTRNEIRKVAQVAMFDYFYQTRGLQFLVAES 647

Query: 92   ISKNSPHFLQNLIMKL-------DSEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELP 151
            +SKN+P F  NL+ KL       D + D+ +++ ++L ++P+NEFEPF ESLGL PSE  
Sbjct: 648  MSKNAPVFNDNLLKKLNGCDVDVDDDDDIVKAITRFLWFHPVNEFEPFLESLGLKPSEFS 707

Query: 152  LFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYED 211
              +P   MFL++D  +LEN+HV  NYGI R KMGK++KEARE+F Y+ G+LASK+++YED
Sbjct: 708  HLIPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFKEAREVFGYETGVLASKIKSYED 767

Query: 212  LGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLV 271
            LG     L KL+ C PS+LIG + +   KV+E L  +G   DW+   +S + +Y+W+ + 
Sbjct: 768  LGFSKLFLSKLIVCSPSILIGDMNVGLAKVMEMLKAIGFGVDWVTENLSEEVSYDWSSMH 827

Query: 272  DTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNP 331
              L FL  +   E ++ +L +  P L+ EDSG+   +L     KLG    E  S++++ P
Sbjct: 828  RCLSFLRDLYVDENELCELIRKMPRLIFEDSGEWTLILAGFEAKLGSSRSELSSLFQKFP 887

Query: 332  VILS-GKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKE 391
               S GK+V N+     FL DI +  ++I  I     L +G   LK   T+   LK GK 
Sbjct: 888  QCQSLGKFVLNLRHCFLFLKDIEMDDDEIGKIFRLHSLWIGVSRLKQTSTLLINLKGGKG 947

Query: 392  GLCLIIRDDPSKLFTLASKSKLKSSEQASCQ-NPAKEMEKTTFLLKLGYVENSDELAKAS 451
             LC +I+++P ++       +++       + N   +  KT FLL LGY ENS+E+ +A 
Sbjct: 948  RLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTKSKTMKTQFLLDLGYKENSEEMERAL 1007

Query: 452  KQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPL 511
            K FRG+G +L+ERF+ LV+ GL    V ++V+  P +L Q+ D+++ K++ L   LGYPL
Sbjct: 1008 KNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACPSILTQACDILESKVNYLVKELGYPL 1067

Query: 512  HTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 571
             T+  FP  L Y ++R+  RFSM+ WL+D+G A P L +ST+L CSD  F   FV+ HP+
Sbjct: 1068 STLVTFPTCLKYTLQRMKLRFSMFSWLQDRGKADPKLQVSTILVCSDKFFATRFVNRHPD 1127

Query: 572  GPSMWESCKK 573
            GP   E  KK
Sbjct: 1128 GPKHLEDLKK 1137

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10
Match: AT3G60400.1 (AT3G60400.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 233.8 bits (595), Expect = 2.7e-61
Identity = 151/515 (29.32%), Postives = 262/515 (50.87%), Query Frame = 1


Query: 69  EAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLD-SEKDVARSLRKYLRYNPIN 128
           +AQ+ + DYLH TRSL +  AE I+ N+   ++NLI+KLD S    ++SLRK+L Y+PIN
Sbjct: 36  KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95

Query: 129 EFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREI 188
           EFE FFES+G+  SE+  FLP +  F S+D  +L+    L  +G P +K+GK+YKE R +
Sbjct: 96  EFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLV 155

Query: 189 FAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI--GQIKMEFIKVLEKLSKLGIEE 248
           F    G + S+L  ++D+G     +I      P  L   G++  E   +  KL +L  E 
Sbjct: 156 FVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFDEF 215

Query: 249 DWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVR 308
           D    ++  ++  +W  +   +     +G    +M +L   N SL LE S + +      
Sbjct: 216 D--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKAGY 275

Query: 309 LVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGS 368
             + G+  ++A  +  +NP I++    K ++     L   GL  +++  +      + G 
Sbjct: 276 FCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVFGR 335

Query: 369 CTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQ------------ASC 428
             LK    V + + +  E +  I+++    L  LAS + +   E              + 
Sbjct: 336 NQLKNLPYVLRAIDL-HERIFDILKNGNHHL--LASYTLMDPDEDLEREYQEGLEELQNS 395

Query: 429 QNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIV 488
           +     ++K  FL ++G+ EN   + K  +   G   +L +RF  L+N+G+    +  ++
Sbjct: 396 RTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 455

Query: 489 RHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNME-RINTRFSMYRWLRDK 548
           R AP +LNQ    IQ+K+  L   +G  L  +  FP YLC+++E RI+ RF  ++WL +K
Sbjct: 456 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 515

Query: 549 GAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMW 568
           G ++ + S+++++A S+  F+     +HP  P  W
Sbjct: 516 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

[Close]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10
Match: AT1G74120.1 (AT1G74120.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-07
Identity = 33/115 (28.70%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 449 GDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAF 508
           G +++ R DCL   GL       +V   P V+    + I++KI+ L N +G+ ++ +A  
Sbjct: 282 GFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADV 341

Query: 509 PVYLCYNMER-INTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 563
           P YL  N+++ I  R+++  +L+ KG    ++ L  ++  S  RF   +V  +PE
Sbjct: 342 PEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 396

[Close]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr
Match: gi|567912857|ref|XP_006448742.1| (hypothetical protein CICLE_v10014682mg [Citrus clementina])

HSP 1 Score: 779.2 bits (2011), Expect = 4.8e-222
Identity = 381/575 (66.26%), Postives = 461/575 (80.17%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKT-ITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT- 60
           MITQ+NH L F PV +EKT I Q  N  F+  + R FC+      P+ SL ES Q P + 
Sbjct: 16  MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75

Query: 61  -GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSL 120
              RVSR ARTEAQ+VLFDYLH TRSLG+ DAEHISKNSP F+ NL+ K+DS KDV RSL
Sbjct: 76  VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135

Query: 121 RKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKM 180
            ++LRYNPINEFEPFFESLGL  SEL   LPR LMFLSDD ++L+NFHVLC+YGIPRSKM
Sbjct: 136 TRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195

Query: 181 GKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEK 240
           GKMY EA EIF +D G+LASKL AYE+LGL   T+IKLVSCCPSLLIG +   F+KVLEK
Sbjct: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255

Query: 241 LSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGK 300
           L +LG + DWIG Y+S K +YNW+++ +TLDFL K+GY E+Q+ +LFK+NP+L+ E SG+
Sbjct: 256 LKELGFKNDWIGRYLSGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315

Query: 301 KVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVS 360
           KVYVLF RL+KLGLKM+E YS++ QNP ILS K+VKN+L+AV FL +IG+G +DI+ +V 
Sbjct: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375

Query: 361 HQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPA 420
               L+GSC+LKGPKTVC +LKVG+E LC II+DDP KLF LASK+++K  EQ  CQNP+
Sbjct: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435

Query: 421 KEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAP 480
           K++EKT FLL+LGYVENS+E+ KA KQFRGRGDQLQERFDCLV AGLD +VV NIV+ AP
Sbjct: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495

Query: 481 MVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKP 540
           MVLNQSKDV+++KID L+N L YPL ++ AFP YLCY+M RIN R  MY WLR++G AKP
Sbjct: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555

Query: 541 NLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
            LSLST+LACSDA+F KYFVDVHPEGP+MWES KK
Sbjct: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590

[Close]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr
Match: gi|641858721|gb|KDO77443.1| (hypothetical protein CISIN_1g007621mg [Citrus sinensis])

HSP 1 Score: 777.3 bits (2006), Expect = 1.8e-221
Identity = 380/575 (66.09%), Postives = 460/575 (80.00%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKT-ITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT- 60
           MITQ+NH L F PV +EKT I Q  N  F+  + R FC+      P+ SL ES Q P + 
Sbjct: 16  MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75

Query: 61  -GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSL 120
              RVSR ARTEAQ+VLFDYLH TRSLG+ DAEHISKNSP F+ NL+ K+DS KDV RSL
Sbjct: 76  VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135

Query: 121 RKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKM 180
            ++LRYNPINEFEPFFESLGL  SEL   LPR LMFLSDD ++L+NFHVLC+YGIPRSKM
Sbjct: 136 MRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195

Query: 181 GKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEK 240
           GKMY EA EIF +D G+LASKL AYE+LGL   T+IKLVSCCPSLLIG +   F+KVLEK
Sbjct: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255

Query: 241 LSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGK 300
           L +LG + DWIG Y+  K +YNW+++ +TLDFL K+GY E+Q+ +LFK+NP+L+ E SG+
Sbjct: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315

Query: 301 KVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVS 360
           KVYVLF RL+KLGLKM+E YS++ QNP ILS K+VKN+L+AV FL +IG+G +DI+ +V 
Sbjct: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375

Query: 361 HQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPA 420
               L+GSC+LKGPKTVC +LKVG+E LC II+DDP KLF LASK+++K  EQ  CQNP+
Sbjct: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435

Query: 421 KEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAP 480
           K++EKT FLL+LGYVENS+E+ KA KQFRGRGDQLQERFDCLV AGLD +VV NIV+ AP
Sbjct: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495

Query: 481 MVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKP 540
           MVLNQSKDV+++KID L+N L YPL ++ AFP YLCY+M RIN R  MY WLR++G AKP
Sbjct: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555

Query: 541 NLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
            LSLST+LACSDA+F KYFVDVHPEGP+MWES KK
Sbjct: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590

[Close]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr
Match: gi|568828220|ref|XP_006468442.1| (PREDICTED: uncharacterized protein LOC102621440 [Citrus sinensis])

HSP 1 Score: 777.3 bits (2006), Expect = 1.8e-221
Identity = 380/575 (66.09%), Postives = 460/575 (80.00%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKT-ITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT- 60
           MITQ+NH L F PV +EKT I Q  N  F+  + R FC+      P+ SL ES Q P + 
Sbjct: 16  MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75

Query: 61  -GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSL 120
              RVSR ARTEAQ+VLFDYLH TRSLG+ DAEHISKNSP F+ NL+ K+DS KDV RSL
Sbjct: 76  VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135

Query: 121 RKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKM 180
            ++LRYNPINEFEPFFESLGL  SEL   LPR LMFLSDD ++L+NFHVLC+YGIPRSKM
Sbjct: 136 TRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195

Query: 181 GKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEK 240
           GKMY EA EIF +D G+LASKL AYE+LGL   T+IKLVSCCPSLLIG +   F+KVLEK
Sbjct: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255

Query: 241 LSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGK 300
           L +LG + DWIG Y+  K +YNW+++ +TLDFL K+GY E+Q+ +LFK+NP+L+ E SG+
Sbjct: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315

Query: 301 KVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVS 360
           KVYVLF RL+KLGLKM+E YS++ QNP ILS K+VKN+L+AV FL +IG+G +DI+ +V 
Sbjct: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375

Query: 361 HQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPA 420
               L+GSC+LKGPKTVC +LKVG+E LC II+DDP KLF LASK+++K  EQ  CQNP+
Sbjct: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435

Query: 421 KEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAP 480
           K++EKT FLL+LGYVENS+E+ KA KQFRGRGDQLQERFDCLV AGLD +VV NIV+ AP
Sbjct: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495

Query: 481 MVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKP 540
           MVLNQSKDV+++KID L+N L YPL ++ AFP YLCY+M RIN R  MY WLR++G AKP
Sbjct: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555

Query: 541 NLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
            LSLST+LACSDA+F KYFVDVHPEGP+MWES KK
Sbjct: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590

[Close]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr
Match: gi|595902982|ref|XP_007213937.1| (hypothetical protein PRUPE_ppa003449mg [Prunus persica])

HSP 1 Score: 775.4 bits (2001), Expect = 7.0e-221
Identity = 381/573 (66.49%), Postives = 459/573 (80.10%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT-- 60
           MI+QLNHL+ F+PV    T  Q  NPS VS K + FC+     H + S+IES QSP +  
Sbjct: 1   MISQLNHLVLFSPVFERTTFVQ--NPSSVSLKFQCFCSSRLTHHSKVSVIESAQSPNSPF 60

Query: 61  GGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLR 120
             RVSR ARTEAQ  LFDYLHCTRS  F DAEHISKNSP FLQNL+  +DSEKDVARSL 
Sbjct: 61  ANRVSRNARTEAQATLFDYLHCTRSFSFTDAEHISKNSPIFLQNLLSNIDSEKDVARSLT 120

Query: 121 KYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMG 180
           ++LRYNPINEFEPFFESLGL PSEL  FLPR LM+LSDD ++ +N H LCNYGIPRS +G
Sbjct: 121 RFLRYNPINEFEPFFESLGLSPSELLSFLPRHLMYLSDDCVLTDNVHALCNYGIPRSNIG 180

Query: 181 KMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKL 240
           KMYKEA+EIF YDYG+LA KL+AYE+LG+   T+IKLVSCCP LL+G +  +F++V EKL
Sbjct: 181 KMYKEAKEIFGYDYGVLALKLQAYENLGISKATVIKLVSCCPLLLVGGVNSDFVRVHEKL 240

Query: 241 SKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKK 300
            +LG+  DWIGGY S  STYNW+R+ DT+DFL KVGYTE QM  LF+ NP+LLLE SGK 
Sbjct: 241 KRLGLGMDWIGGYASGNSTYNWDRMFDTMDFLDKVGYTEEQMCVLFELNPALLLEGSGKN 300

Query: 301 VYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSH 360
           VYVLF RL+KLGL+M+E YS++ QNP +LS K +KN+L AVDFLF+IG+GTE++A IV++
Sbjct: 301 VYVLFGRLLKLGLEMNEVYSLFMQNPQVLSVKCMKNLLLAVDFLFEIGMGTEEMADIVAN 360

Query: 361 QILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK 420
            +  L S + K PKTVCK+LKV ++GL  +I++DP K+ TLASKSK K+  Q     P+K
Sbjct: 361 DVEFLSSSSFKRPKTVCKDLKVKRDGLLQMIKEDPHKVLTLASKSKGKN--QLISPLPSK 420

Query: 421 EMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPM 480
            MEKT+FL++LGY+ENSDE+ KA K+FRGRGDQLQERFDCLV AGLDC+VV+NIV+ AP 
Sbjct: 421 HMEKTSFLVRLGYIENSDEMMKALKKFRGRGDQLQERFDCLVQAGLDCNVVSNIVKQAPH 480

Query: 481 VLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPN 540
           VLNQSKDVI+ KI CL NCL YPL ++ AFP YLCY+M+RIN RFSMY WLR+KGAAKP 
Sbjct: 481 VLNQSKDVIEMKISCLTNCLRYPLDSVVAFPAYLCYDMDRINLRFSMYAWLREKGAAKPM 540

Query: 541 LSLSTVLACSDARFVKYFVDVHPEGPSMWESCK 572
           LSLST+LACSDARFVKY+VDVHPEGP+MWES K
Sbjct: 541 LSLSTLLACSDARFVKYYVDVHPEGPAMWESFK 569

[Close]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr
Match: gi|590621796|ref|XP_007024871.1| (Mitochondrial transcription termination factor family protein, putative [Theobroma cacao])

HSP 1 Score: 770.4 bits (1988), Expect = 2.2e-219
Identity = 381/579 (65.80%), Postives = 467/579 (80.66%), Query Frame = 1


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTG- 60
           MIT L+  +  +P++ EK+    HN   VS + R F +      P+ASL +S +S ++G 
Sbjct: 16  MITHLDKFVVLSPIVYEKSDV-VHNLCSVSLRVRYFRSSRLVFRPKASLADSIRSSSSGF 75

Query: 61  -GRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLR 120
             R+SR A+TEAQ VLFDYLH TRS  F DAEHISKNS HFLQNL+ K+D EKDVA+SL 
Sbjct: 76  ASRISRAAKTEAQVVLFDYLHSTRSFRFMDAEHISKNSHHFLQNLLSKIDPEKDVAKSLT 135

Query: 121 KYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMG 180
           K+LR+NP+NEFEPFFESLGL PSE+   +P+RLMFL DD +ML+NFHVLC+YGIPRSKMG
Sbjct: 136 KFLRFNPVNEFEPFFESLGLSPSEVSTLVPQRLMFLRDDSVMLDNFHVLCDYGIPRSKMG 195

Query: 181 KMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKL 240
           KMYK AREIF YDYG+LA KL+AYE+LGL   T+IKLVSCCPSLL+G +  EF   LE+L
Sbjct: 196 KMYKVAREIFGYDYGVLALKLQAYENLGLSKPTVIKLVSCCPSLLVGGVDAEFAGALERL 255

Query: 241 SKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKK 300
             LGI+ D IGGY+S K  Y+W R++D L+FL +VGY E Q+ +LFK+NP+LL E SGKK
Sbjct: 256 KVLGIKNDDIGGYLSGKGMYDWGRMLDMLNFLDRVGYNEEQLGNLFKTNPALLFEGSGKK 315

Query: 301 VYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSH 360
           VYVLF RL+KLGL+M+E +S++ QNP ILS K  KN+ +A+DFLFDI + TEDIA IVS 
Sbjct: 316 VYVLFGRLIKLGLRMNEVHSLFMQNPHILSVKCTKNLFKALDFLFDIAMDTEDIAHIVSR 375

Query: 361 QILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK 420
            + L+GSC+LKGPKTVC+EL V KE LCLII++DP K F+LASKSK+ SS Q + ++ +K
Sbjct: 376 HVELMGSCSLKGPKTVCRELNVEKEELCLIIKEDPLKWFSLASKSKVLSSGQVASKDTSK 435

Query: 421 EMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPM 480
            +EKTTFLL+LGY+ENSDE+ KA KQFRGRGDQLQERFDCLV AGLDC+VV N++RHAPM
Sbjct: 436 YLEKTTFLLRLGYLENSDEMLKALKQFRGRGDQLQERFDCLVCAGLDCNVVKNLIRHAPM 495

Query: 481 VLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPN 540
           VLNQSKDVI++KIDCL+N LGYPL ++ AFP YLCY+MERI+ RFSMY WLR++GAAKP 
Sbjct: 496 VLNQSKDVIEKKIDCLKNWLGYPLESVVAFPAYLCYDMERISRRFSMYVWLRERGAAKPM 555

Query: 541 LSLSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHN 578
           LSLSTVLACSDARFVKYFVDVHPEGP+ WE+ KK  LH+
Sbjct: 556 LSLSTVLACSDARFVKYFVDVHPEGPAKWETLKK-SLHS 592

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g05980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEFH_ARATH	4.7e-60	29.32	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana G...	[more]
MTEFE_ARATH	2.3e-06	28.70	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]
MTEF8_ARATH	3.0e-06	29.63	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana G...	[more]

BLAST of Cp4.1LG20g05980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
V4U7M9_9ROSI	3.4e-222	66.26	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014682mg PE=4 SV=1	[more]
A0A067GCM4_CITSI	1.3e-221	66.09	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007621mg PE=4 SV=1	[more]
M5WPG4_PRUPE	4.9e-221	66.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003449mg PE=4 SV=1	[more]
A0A061GDK1_THECC	1.6e-219	65.80	Mitochondrial transcription termination factor family protein, putative OS=Theob...	[more]
W9QRR9_9ROSA	2.3e-207	63.22	Uncharacterized protein OS=Morus notabilis GN=L484_006241 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g05980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19650.1	7.5e-165	58.21	Mitochondrial transcription termination factor family protein	[more]
AT5G45113.1	4.8e-111	47.70	mitochondrial transcription termination factor-related / mTERF-relat...	[more]
AT5G06810.1	4.1e-110	39.45	Mitochondrial transcription termination factor family protein	[more]
AT3G60400.1	2.7e-61	29.32	Mitochondrial transcription termination factor family protein	[more]
AT1G74120.1	1.3e-07	28.70	Mitochondrial transcription termination factor family protein	[more]

BLAST of Cp4.1LG20g05980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|567912857\|ref\|XP_006448742.1\|	4.8e-222	66.26	hypothetical protein CICLE_v10014682mg [Citrus clementina]	[more]
gi\|641858721\|gb\|KDO77443.1\|	1.8e-221	66.09	hypothetical protein CISIN_1g007621mg [Citrus sinensis]	[more]
gi\|568828220\|ref\|XP_006468442.1\|	1.8e-221	66.09	PREDICTED: uncharacterized protein LOC102621440 [Citrus sinensis]	[more]
gi\|595902982\|ref\|XP_007213937.1\|	7.0e-221	66.49	hypothetical protein PRUPE_ppa003449mg [Prunus persica]	[more]
gi\|590621796\|ref\|XP_007024871.1\|	2.2e-219	65.80	Mitochondrial transcription termination factor family protein, putative [Theobro...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g05980	Cp4.1LG20g05980	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g05980.1:cds:001	Cp4.1LG20g05980.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g05980.1	Cp4.1LG20g05980.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 261..358 score: 3.2E-8coord: 267..405 score: 2.4E-8coord: 450..552 score: 3.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 470..501 score: 23.0coord: 502..535 score: 210.0coord: 213..244 score: 110.0coord: 317..348 score: 1600.0coord: 178..208 score: 3
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 413..572 score: 1.7E-271coord: 61..396 score: 1.7E
None	No IPR available	PANTHER	PTHR13068:SF7	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 413..572 score: 1.7E-271coord: 61..396 score: 1.7E