Cp4.1LG19g03300.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCGCCGCCGACAGACCCAAACCACCCAAACCATCCTCCATTGCATCACTCCGACTATCCCCGCGAACTCTCCTCCTTCCTCCACCGCCACCTTCTCACTCTCATGATCCGTAATCCTCTAGTTCCGTCGCGTACGCATCGGATTTGTGACGTTTGCCGTGAATCCATCGACGGCGATTTCTACGGCTGCAACCACTGCCATTTCCACGTCCATCCATATTGCACCCACCTCCCCAAGAGCCTGCGCCATGTCATTGACCCCACCCATAAGTTGAGGCTCCACAAGCTCTCTGCTGGCTGCTGTTCCGTTTGCAAAGCTGATTGTTCTTCTTTTTGGGTGTACGGCTGTGACGATTGTAGAGTTTATGTTCATCTTAGATGCCTCCTAAAGCCGTTAGGTTCGCGGGAGAAAACCGACCAGCCGTCCGGTTCACGTGGGATACATAACCATCACCATGCACCGCCGCCACCGTGGGTGACGGGGCCACCTCATTTTCCCGGTGGCTTTCCCGCTGGTGGGTGGGCTTTCCCAAATGGTCACGGTTGGGAACATCCGAGTAACCATTTTGGGCATCTTGGACCTGTTCCATTTGCACATAACAACCATCCAAGTTATCACCCAAATCATGGTGGACACGGACAAGGACACGGACACGGACACGGACATGGACATGGCCAAGGACACGGACACGGACACAGCCAAGGACATGGACAAGGACACGGACAAGGCCATGGACAAGGCAACGGACATGGTCAATGTCATTGTCATGGACACGAACATGCACCTTGGTCGAGTTTGGGATCGCTGTTTGGTACTACAATGTTTTCCCTCGTTGGGAACTTAGCAATCGGTGCTCTGACTGAATTTATTTTTGGTTGTTAA ATGGCTCCGCCGCCGACAGACCCAAACCACCCAAACCATCCTCCATTGCATCACTCCGACTATCCCCGCGAACTCTCCTCCTTCCTCCACCGCCACCTTCTCACTCTCATGATCCGTAATCCTCTAGTTCCGTCGCGTACGCATCGGATTTGTGACGTTTGCCGTGAATCCATCGACGGCGATTTCTACGGCTGCAACCACTGCCATTTCCACGTCCATCCATATTGCACCCACCTCCCCAAGAGCCTGCGCCATGTCATTGACCCCACCCATAAGTTGAGGCTCCACAAGCTCTCTGCTGGCTGCTGTTCCGTTTGCAAAGCTGATTGTTCTTCTTTTTGGGTGTACGGCTGTGACGATTGTAGAGTTTATGTTCATCTTAGATGCCTCCTAAAGCCGTTAGGTTCGCGGGAGAAAACCGACCAGCCGTCCGGTTCACGTGGGATACATAACCATCACCATGCACCGCCGCCACCGTGGGTGACGGGGCCACCTCATTTTCCCGGTGGCTTTCCCGCTGGTGGGTGGGCTTTCCCAAATGGTCACGGTTGGGAACATCCGAGTAACCATTTTGGGCATCTTGGACCTGTTCCATTTGCACATAACAACCATCCAAGTTATCACCCAAATCATGGTGGACACGGACAAGGACACGGACACGGACACGGACATGGACATGGCCAAGGACACGGACACGGACACAGCCAAGGACATGGACAAGGACACGGACAAGGCCATGGACAAGGCAACGGACATGGTCAATGTCATTGTCATGGACACGAACATGCACCTTGGTCGAGTTTGGGATCGCTGTTTGGTACTACAATGTTTTCCCTCGTTGGGAACTTAGCAATCGGTGCTCTGACTGAATTTATTTTTGGTTGTTAA ATGGCTCCGCCGCCGACAGACCCAAACCACCCAAACCATCCTCCATTGCATCACTCCGACTATCCCCGCGAACTCTCCTCCTTCCTCCACCGCCACCTTCTCACTCTCATGATCCGTAATCCTCTAGTTCCGTCGCGTACGCATCGGATTTGTGACGTTTGCCGTGAATCCATCGACGGCGATTTCTACGGCTGCAACCACTGCCATTTCCACGTCCATCCATATTGCACCCACCTCCCCAAGAGCCTGCGCCATGTCATTGACCCCACCCATAAGTTGAGGCTCCACAAGCTCTCTGCTGGCTGCTGTTCCGTTTGCAAAGCTGATTGTTCTTCTTTTTGGGTGTACGGCTGTGACGATTGTAGAGTTTATGTTCATCTTAGATGCCTCCTAAAGCCGTTAGGTTCGCGGGAGAAAACCGACCAGCCGTCCGGTTCACGTGGGATACATAACCATCACCATGCACCGCCGCCACCGTGGGTGACGGGGCCACCTCATTTTCCCGGTGGCTTTCCCGCTGGTGGGTGGGCTTTCCCAAATGGTCACGGTTGGGAACATCCGAGTAACCATTTTGGGCATCTTGGACCTGTTCCATTTGCACATAACAACCATCCAAGTTATCACCCAAATCATGGTGGACACGGACAAGGACACGGACACGGACACGGACATGGACATGGCCAAGGACACGGACACGGACACAGCCAAGGACATGGACAAGGACACGGACAAGGCCATGGACAAGGCAACGGACATGGTCAATGTCATTGTCATGGACACGAACATGCACCTTGGTCGAGTTTGGGATCGCTGTTTGGTACTACAATGTTTTCCCTCGTTGGGAACTTAGCAATCGGTGCTCTGACTGAATTTATTTTTGGTTGTTAA MAPPPTDPNHPNHPPLHHSDYPRELSSFLHRHLLTLMIRNPLVPSRTHRICDVCRESIDGDFYGCNHCHFHVHPYCTHLPKSLRHVIDPTHKLRLHKLSAGCCSVCKADCSSFWVYGCDDCRVYVHLRCLLKPLGSREKTDQPSGSRGIHNHHHAPPPPWVTGPPHFPGGFPAGGWAFPNGHGWEHPSNHFGHLGPVPFAHNNHPSYHPNHGGHGQGHGHGHGHGHGQGHGHGHSQGHGQGHGQGHGQGNGHGQCHCHGHEHAPWSSLGSLFGTTMFSLVGNLAIGALTEFIFGC
BLAST of Cp4.1LG19g03300.1 vs. TrEMBL
Match: A0A0A0L116_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296890 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.8e-52 Identity = 114/203 (56.16%), Postives = 130/203 (64.04%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TrEMBL
Match: A0A0A0L121_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40 Identity = 100/205 (48.78%), Postives = 124/205 (60.49%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TrEMBL
Match: A0A0A0KZP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296910 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.6e-40 Identity = 105/213 (49.30%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TrEMBL
Match: A0A0A0L2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.6e-32 Identity = 116/333 (34.83%), Postives = 145/333 (43.54%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TrEMBL
Match: A0A0A0KXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296870 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 83/220 (37.73%), Postives = 105/220 (47.73%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22 Identity = 67/197 (34.01%), Postives = 96/197 (48.73%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 93.6 bits (231), Expect = 2.2e-19 Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TAIR10
Match: AT5G45730.1 (AT5G45730.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08 Identity = 35/120 (29.17%), Postives = 56/120 (46.67%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. TAIR10
Match: AT4G01930.1 (AT4G01930.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06 Identity = 40/128 (31.25%), Postives = 53/128 (41.41%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. NCBI nr
Match: gi|449448880|ref|XP_004142193.1| (PREDICTED: uncharacterized protein LOC101203241 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52 Identity = 114/203 (56.16%), Postives = 130/203 (64.04%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. NCBI nr
Match: gi|449448872|ref|XP_004142189.1| (PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40 Identity = 100/205 (48.78%), Postives = 124/205 (60.49%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. NCBI nr
Match: gi|659069141|ref|XP_008448356.1| (PREDICTED: uncharacterized protein LOC103490570 [Cucumis melo]) HSP 1 Score: 172.9 bits (437), Expect = 8.1e-40 Identity = 100/206 (48.54%), Postives = 122/206 (59.22%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. NCBI nr
Match: gi|449448876|ref|XP_004142191.1| (PREDICTED: uncharacterized protein LOC101202768 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 8.1e-40 Identity = 105/213 (49.30%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Cp4.1LG19g03300.1 vs. NCBI nr
Match: gi|659069133|ref|XP_008448318.1| (PREDICTED: uncharacterized protein LOC103490545, partial [Cucumis melo]) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35 Identity = 83/148 (56.08%), Postives = 98/148 (66.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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