Cp4.1LG18g02430.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g02430.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ER membrane protein complex subunit-like protein, putative
Location	Cp4.1LG18 : 4057905 .. 4066788 (-)
Sequence length	1112

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAATATTGAGTACTCAGACGAAGGTCACTTCGATTCTCGCTCTTCGAAAGTTCAGCTATGGGATTCCGTTGTGGCTTCATTTTCTGTCTCTTGATTTGTTCGTCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACGCAGCAGATTCAGTATACAGATGCCGCTCAAACCCGATCCACGCCTCCCCCAAGCCGTACGACATCGACGAGGAGGCGATTTTCTGATCCTGATTTGGATTCTAAGGTCCAGTTTCAGCTAGAGCACTCATTTGGGGATTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGGTGAATCTGTTTGTTTGATCTCCGTTTACTTGTTTTGTCGTGCTGTTTAGACTTCGAGAAATTTGGATGGTAAATTGAAATGGAAGAATTTGCACATGCCTTGATTGGTTGACCGTTTGTCGTTCCTTCTAGTTAAATTTATTGTTCGTAAGATTTGCAATGAAAATCTTTGGTATTGAATAATCACCGAGCTTCCATAAAAGAGTGTCGCTCACACCTCATCTAGATGCTCCTTGCATCCTCAAAGAATTAGTAAAAAAAAATCGAGGCTACTATCATGGTTGTCTCCTTCATGGTGATTTTTCTGTATTAGCCGTATAGAGTAATGAAACAATTAAACACTTGTTTTACTGTGTGGTCATGTGTTTTAGTGGTTCAGGATTAGGGGAGCTTGGGGTAAGCCAGGTGCTTTTGAACGATTTCGTTTCTGATTTCAATCGGATTATTTTCGGTTGGATGTTGTTCAAAATGAGAAAGGCGTCAGGGTTTTGTGTTGTGTACTGGTTTTCTTGCATCTTCAACTAGAAGGGAAAGGATATTGGAAGCCAAATTCAAAGGGGAGGCCCAGTTAGGGGCTATGTTAAATCTGTCAACTTCATTCTGGGCTGCAAATTTGATGATTTTCCACCGAAATATCCTTTATTGATGATTAGTTCATGGAAGGGTATAGTATGAATTGTATATTTTCTGTTTTCAAGTGTTGTCTTTTCTGACATGGTTTGTTGTTTATGCTTTTAATGATATGCAAATTCAATACTCATTCTTCTTCTGGGATCAATGGAACCAATAAGTTTAATTGTCCTGTAGTTTCTCTATTTTATGTTACAATTCAGTAATTCACTTCTTTTTATATTTTGAAACTCTTATGTTCAGTAATTCGGTAATTGCAGACTTTTCTGTTTCTCTTATCCTAAGCATCCAAAATTGTCAGCTATTTCACATTTTCATTGCCAATGACATGCTCTATTTCTTTTGATAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGTTTTTACTGAAGAGGATAGGAAGAAGTTCACGGTAACAACTCCCTTATGTCTTGGTTATTTCATTTTGTGTATTGCTCGTAAAATTCCCAAAATCTAGATTGAAGTTCCTTTTAATTTTTTTAATGATTATCATTAATTTATTTTTGTAGGCCTTGTTGCAAGAAGATGGTTTCTATAGTGTAAGATTGACAACCAATGTTTTGAAGTCACCGGAACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGCAGTAAGTTAATTGCAGATTATTAATTATAGCTCATCATGGTCTCTATCCAAGGGGTGAGTATGGTGGCAATGATCAATCACAATCCAAGATGTCATAGGTTCCTGGAAACAAATTTGTAGGGATACATCCTGGTATCTACCTTTTAACCTAGCATTTTGGGATGGGCATTTAAAAAAATGATTTTGATATATTTAGTTATGTTGCTGCTTATTGCATTTGTATTTAATTTTATAGCGTTTTATAGCTCATTCACTTATCTGTAGTTTTGTTGACATTATTTTTCCATGCATTATTCTTCAGAGACATTTGAAGTGGGCCCTCATGAGTCATGAGATAAATTGGAAAGAGTTTTTATTTATTTTTTTCTTATATATAAATAGTAGGAGAAGTGATAAGGAAAGTGATCTTTTTGAATTCTTCAGAATAATCGTTAGAGGAATTAAGGTTGTGAATTTCTCTGTAGCTGTTGATGATTCTTCTTCTCGAAGAGGTAGAGAGGGGTGAGAACTGAATCCTAGCTAACCTGTAGGACATTCGGAGGTAAATATAGAATAGTTATTGAGAGAGAATCTGGAAGAAAAAAGGGTAAGAGAGACCATGGGGATTGGTTTGTTGAATGGTGGGGCTGATTTTTAAAGAAAAAAATAATATGAAGAGGTTTTTGTGTCTATTGTTGTAGTTTGTTTAGTGTAGGAGATTTTTTGTTTTTTATTTTTGATTTATCATATTATATTTTGTTGGTTTATATTGGTGTTATTTTGATTTTGTTTTCAATTTTGTTTGATAATCTTTGTTAATTATGAATTTATTATAATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGTAAATTTAATTATTTATTATCACGTTAGCTTAAAAATGCTATAAAAGTAATTAAGAAATGTCATTTTTGTTTTCTGTAACTTTAGCTGATGAAAAACTGATGCTTTTGGACATACTTTGAATCTTCAAGGTTAAATGTCACTATTTGATATGTAAGGATAAGTTCCCTAATTTCTACTAAATGAATATCAAATTTATATTTGATCCATTAAATGTACAAGTCTTGTCATTTCTTGCAACTCGTAGCCTATTCCCTGCTCTTTATCTTTTGATTTCATGTGCTTAGTTGTTGATGGAAGTTCTTATTTAACCCTGACTTTTCATTTTATGATTTCAGAGATGTCTTCCGCGAGGAGAATTGGATGAGCATTTTGTGATTCACATGGTAAATCTCCACCTTTTGTTTCTGCAAACATTATTGTTATTACTTTTCACTGACCTTTTCACGACATGAACTTTAATGTTTTAACATTCTATGGCTGTGCTTCCTTTACAAATTGGTTATGTAAATGCACATAATTTTTTTATACATTTTTTTTAAATAACAAATATCTTACAAATTTCTCAATATCAAATTAAGTTTAACAATTGTTCTATGAAATTAGTTGAGAAGTGTGTATTGGCTCGGACTCTGATGGTTACCAAAAATAGAATCTAGGGTGAATTGGTTTAATGACAGTATAGAAAACCTTTTCTGTTGCCTCAAAGTATATTGTCCTAGTGGGTTTGAATCCATATAGCTTAGTTTCTTGCAATACTCATATTAAGATATTAGGTTTAGATCAGGCAAATTGTTCAACTTTCATGTTATATTTACCTATTTGGAATGAGGAATGAGACTGGAAACATCCCGACATTACCCTGCTTCTGCATTTTTATAACACTGCTAGTAAATTAGATTGCTAATTCAAGTGTTGAATGCAGTAGATTTTCATAATTAAAACTAAAGGTTTGCATGTTATACCTCATCATGCTTGACACAAAAATTGGTGGGATGGATTTTTGTTAAACGTAATTTTGTCTGTATGATCTTAAGTTTTGGAAGCTGTGCACCAATTTACGGAATTATGTATCAATAACAATGGTCAAATAAATGGGAGCGGTGAGATTAACTTTAATACTACTGAACAAATCTCAAGTAAAGATATTCACTTTCATGTGTCTGAACACTCTTGTAAATGCATCATATCTAAAAGGTTCTCGTATCTAAAGCACATCTTCTGCTGTTTTGCTTCCAGGATGGTGTTAATATTTTGGCTGTTAATTATGGCACCCCTGGAGCATGCCCTTTTCCCCGGCAACTGAGACTTGTAAGTATTCTTTTGCCCTTGGCTTATCATTGGTTTTGTTTCCTCGTGATAACTACAAGCATCTTACCGTATATGGAGAATCAAAGTGATGGTTTGAATTAATAGTTGCTGAACCAGAATTAGAGTCGCCAATTCATTTGAGCTTATGAAATCATCTTCTTGTTTACAAATGTATTATATTTCCTCCACGGTTTCTTTATCAAAGTTCTCTTAAGCACATATGTAGCAACCCTACACTAGATGAGGGGCTAACTGAACAACTAGTAGGATCATTGTTAATGATCAAGTGTTCTAGACAGAAGTAATTAAACCTTTTAATGTCTACAAGTTCATCAAGGAATCCATTAGATTAATAGAAGTACTAGCAAAAAATACTATAGGACGATCGTCTCTTTATAGCTTTCAAGATGAGATGCAATCAGTGGCGTTGCTTGACTGAAGTGAGATGCAGTTGATTAACGTCCGGGTGAAAAGGTATGATTAAAATCTTACTTACTTGGCCCTAGCTTACTACTCCTACTGGGATAGTCGCAAAGGATGACTAAGATAGCTAATAGCTGCTCAGCTCATATTGGCCTGGTCTGATTCAACTACCAGCACAGGAATGCTAGGGAAAATAGAAGCACTAGGATAGAGAGGAACAACGGACGATAAGAACCGTATAAGACCTTACATCTATCTATAGTCCTCCGAGAGTTTGAGAAGCTAAAACAGCAAAGGACGAATTAGCTCTATCAAAGATTTAAACCTCATTAGGTTTTCTTTTGTCAGTCATTCTCTTTCTCCATCAGAGTGTAGATCGTGCTTAAGAGGAAGTGAATCAATTGACCATGTTTCTTCATTGTTATTTTGCTGGCTTTTGTGGCGGGGATCCTAAGGATTTCTTTTTGCTTCCCTAAGAAGGTGGATGAATGACTTTGGGAAGGAATAAATGGGTGGAATTTGAATGGAAAAGCCAAGGTGGTGGGGAGTTGTGCCGTTAGAGCCCTCTCATGGCATTTTTTGAAGGAAAGGAATGCTAGAACCATTGAAGATAAGACTTTACGTTTTGATGGGTTTTGTAATCTTGTCCAAAATTCGGTTGTACCTTGCCTTTTTTGGAATATAGTCCTTTCACGTTTCTCATCAAAAAAAATTATAGACAATAAGAGACATGATTATGATATATAATAAATGTTCTTGAACTGTGTTTTTTATTTGGTTTATACTTTCGTTCACTAACATTCATGTGGATGGTCTCTCCTTCAGCCTTCAAAATGGTCTTTTAACTCCCTCACATTTTTGAAGAGCGGCGAGCAGGCTCCTAGGTAAGTCCGTTTTTACATTTATCCTTTCATTTCTCTCGTTGAGCCTAATTTTATTAGCTTGCCCGACTGCGTTTATGATGCTGTAATATGAATGTGTTCTTGAAAAGTGAAGAAGAGGTTATACATGAAATGACATAATTAACTTCCCATGAATTGGAGAAAAAGCTACATCTTCAAAACCTCCAAAAACGTTCCAAACACCATGGCTCTGTATTGAAAGCTTAAATACCTTTTCTAGTCACCAGCCTTTCAAACCTTGGACCACCAAAAACAAAACAAAATCTTCACAACTACTGCTTCTTTAAGGCTTTTTTATACTGCAACGAGCTCTTCTTTTATGCATTATCCTTTCCATCTCAGATTGGCACCAAAATTATTCCGGGTTTTTTTCAGAGAACCAGCACCCTCATTCCCTAACTTCGCTTTTACATACAAATCATCATCCAAATGTCCAAAATCTGGAGATGGATCAATTATGGCCTTAGAAATCCTCATTTCTTTACTTTTTACATTGCTTGAATGAAGCAATGGAACGAGTTCTCCCTTCGCATCATCTTTATGGATTTGTGTGTTCTAGATTGAGACGATAGGTTGTGTTGGTTTGCTGTCAAGTGCAGTCTGAAATTTAAATTTCTCTATACATTTCACAATTTGATTTTTGGTTTAGTTAGTTTTTTAGAGTTGGGCATGTTTTCTCACCATTTCTAAGAAACATTTGAATTCTTAGCCAAATTTAAAAACCAAAACAAGTCTTCTAAAACTACCTATTTTAGGTTTCTTGATGATCATTTTATTTTGGTTTTCGGTCTTCGAAAACCAAGCTTATAAACACTATTTCTACTTATAGTTTTCTTTTTGCATTACCTACTTTTTTTAAACGTTTTTTAAAATCAAGCCAAAACAAGAATAACTCTTATAAACATGGTTTTGTTTTTGTAATTTGAAAGTATAATTTAAAAAAAAACAGAAGGGTTGTTAAATGGTGTGTTATAATTTTAAAACTTAACTTGTATTTTGAAAATGGTTATAAAGACAACAAAACAAAGAGACCTAAGTAGGTGTAGTGTTTATAAGATTAGTTTTAAAAAATAAAAACCATAAACTTCTGGTTTTAAATCGGGGTCTCGGTTGCTTATCTAAAGTCGTCTTGAATTTGATAAATACGATAACTATTATTTTCTCAGTACATCCTATACTCAAAGTTTAGATTCAATGGTTTTCACAGAACTCCTATATTTGCTGATGACATTCTTGTTGGTGAAACTGGAGAAGGGGAAGGTGTAAAGCCACCAGAAAAGTCATTTTGGGCCAAATATGTGAGTTTCAATGAAAAGAGAAATTATTCCATAACCTTAAATTTTGACATATTCTTACCGGATTTGTATCCCTATTATGGCAGTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCTACGGTAAGACGACGATAGGAACTGTTAGAAAAATCGACAGGAAAGCATGCACCGACGTGAAATGGTTCGTTTTCCTTGTAGTTTTCAACATAATGATTGGACTTGGAGAATTTTTTGGCCATGTATTTCTAACTTTATTAGCATTAGAAACTTTGTCAAAGTGCAGAATACTGTATATCCCATTTATTTGTTCGACTGATGTTCAACTTCCATTTGAGACTCCCGTTGGAATTTGTTCATTGAAGTATTTATGTTTTATTATGGAATTGAGAATGATACTGATTACCATTACCATGAGGTAAACATGATATGCCCCATGATATGCATAATGTTAGAAATGCTAGATAATAGTTGTAGCCAATAGAAGAGTTTTTCATAATTTTTCCGTTGTCGAGTAAGGTTATTATCGTTGGATCTTTCCATAACCGTTGGATACGAGCGGAGACGGGATGGCTTCTTCATCCTTGTCCTTGAGATGGGGAGAGGCTAAATGTTATTAACAATAAGGCGATGGTTCTGAATTCTTGGTCTCTTTTATCTTTCTCGAGTTTCTCATCTAATTTATGTATATAAGCAAATGGGTGTACACCAATACTATAACTGGCTAAGTATCTACTTCTAATACAAGTAAAATGATATATATAGAGAGAGAGAGAGAGGGAAGATCAGTTTGTTATCTCTAGAGTAACTTTTATCCGTTGAGTAACGACCCTTCCACTCTGCACCGTCGGATCACTAAGGCCGACTTTCATTCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCTAATCTCTGTCTAGCAAGAAACCTTTGCATGCCTCTGTTGCCTTTTGGGAGGCCTACGCCCCATAGGAAGTGTCTACCTGAGACTATTCCTTGGCCCGTAGGTCCTGACACAAGGTTCGAGAGGAACTGTCTACTTGAGACTGTCCCTTGGCTAATCTTCACAACTACTGCTTCTTTAAGGCTTTTTTATACTGCAACGAGCTCTTCTTTTATGCATTATCCTTTCCATCTCAGATTGGCACCAAAATTATTCCGGGTTTTTTTCAGAGAACCAGCACCCTCATTCCCTAACTTCGCTTTTACATACAAATCATCATCCAAATGTCCAAAATCTGGAGATGGATCAATTATGGCCTTAGAAATCCTCATTTCTTTACTTTTTACATTGCTTGAATGAAGCAATGGAACGAGTTCTCCCTTCGCATCATCTTTATGGATTTGTGTGTTCTAGATTGAGACGATAGGTTGTGTTGGTTTGCTGTCAAGTGCAGTCTGAAATTTAAATTTCTCTATACATTTCACAATTTGATTTTTGGTTTAGTTAGTTTTTTAGAGTTGGGCATGTTTTCTCACCATTTCTAAGAAACATTTGAATTCTTAGCCAAATTTAAAAACCAAAACAAGTCTTCTAAAACTACCTATTTTAGGTTTCTTGATGATCATTTTATTTTGGTTTTCGGTCTTCGAAAACCAAGCTTATAAACACTATTTCTACTTATAGTTTTCTTTTTGCATTACCTACTTTTTTTAAACGTTTTTTAAAATCAAGCCAAAACAAGAATAACTCTTATAAACATGGTTTTGTTTTTGTAATTTGAAAGTATAATTTAAAAAAAAACAGAAGGGTTGTTAAATGGTGTGTTATAATTTTAAAACTTAACTTGTATTTTGAAAATGGTTATAAAGACAACAAAACAAAGAGACCTAAGTAGGTGTAGTGTTTATAAGATTAGTTTTAAAAAATAAAAACCATAAACTTCTGGTTTTAAATCGGGGTCTCGGTTGCTTATCTAAAGTCGTCTTGAATTTGATAAATACGATAACTATTATTTTCTCAGTACATCCTATACTCAAAGTTTAGATTCAATGGTTTTCACAGAACTCCTATATTTGCTGATGACATTCTTGTTGGTGAAACTGGAGAAGGGGAAGGTGTAAAGCCACCAGAAAAGTCATTTTGGGCCAAATATGTGAGTTTCAATGAAAAGAGAAATTATTCCATAACCTTAAATTTTGACATATTCTTACCGGATTTGTATCCCTATTATGGCAGTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCT

mRNA sequence

TATAATATTGAGTACTCAGACGAAGGTCACTTCGATTCTCGCTCTTCGAAAGTTCAGCTATGGGATTCCGTTGTGGCTTCATTTTCTGTCTCTTGATTTGTTCGTCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACGCAGCAGATTCAGTATACAGATGCCGCTCAAACCCGATCCACGCCTCCCCCAAGCCGTACGACATCGACGAGGAGGCGATTTTCTGATCCTGATTTGGATTCTAAGGTCCAGTTTCAGCTAGAGCACTCATTTGGGGATTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGTTTTTACTGAAGAGGATAGGAAGAAGTTCACGGCCTTGTTGCAAGAAGATGGTTTCTATAGTGTAAGATTGACAACCAATGTTTTGAAGTCACCGGAACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGCAAGATGTCTTCCGCGAGGAGAATTGGATGAGCATTTTGTGATTCACATGGATGGTGTTAATATTTTGGCTGTTAATTATGGCACCCCTGGAGCATGCCCTTTTCCCCGGCAACTGAGACTTCCTTCAAAATGGTCTTTTAACTCCCTCACATTTTTGAAGAGCGGCGAGCAGGCTCCTAGAACTCCTATATTTGCTGATGACATTCTTGTTGGTGAAACTGGAGAAGGGGAAGGTGTAAAGCCACCAGAAAAGTCATTTTGGGCCAAATATTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCTACGTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCT

Coding sequence (CDS)

ATGGGATTCCGTTGTGGCTTCATTTTCTGTCTCTTGATTTGTTCGTCTGTGGCTTTTCAATCCGACGAGCTTCTCGTTGATGATGACGAGTTTGAAGGGACGCAGCAGATTCAGTATACAGATGCCGCTCAAACCCGATCCACGCCTCCCCCAAGCCGTACGACATCGACGAGGAGGCGATTTTCTGATCCTGATTTGGATTCTAAGGTCCAGTTTCAGCTAGAGCACTCATTTGGGGATTCTGATTTCGCTCCTGCTGGCTTATTTACTGCACGTCTGAAGACTTCGAGCCATGGTGGTCAGTCACTTACAAAGCTGCGGTTTTCAAGAAATGTTTTTACTGAAGAGGATAGGAAGAAGTTCACGGCCTTGTTGCAAGAAGATGGTTTCTATAGTGTAAGATTGACAACCAATGTTTTGAAGTCACCGGAACCGGGAGAGAGCTATGTTTACTCATCAGTGAAAGCAAGATGTCTTCCGCGAGGAGAATTGGATGAGCATTTTGTGATTCACATGGATGGTGTTAATATTTTGGCTGTTAATTATGGCACCCCTGGAGCATGCCCTTTTCCCCGGCAACTGAGACTTCCTTCAAAATGGTCTTTTAACTCCCTCACATTTTTGAAGAGCGGCGAGCAGGCTCCTAGAACTCCTATATTTGCTGATGACATTCTTGTTGGTGAAACTGGAGAAGGGGAAGGTGTAAAGCCACCAGAAAAGTCATTTTGGGCCAAATATTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCTACGTGGATGTACCTGATACCACTAGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGTTGGTGGCCAAGCAGCAGGACAAGGACAAGCACAGCCACAGCAGTCAGCTGCTGCAATACAACGTGGACCAGGCTCGTCT

Protein sequence

MGFRCGFIFCLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAAQTRSTPPPSRTTSTRRRFSDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVNYGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSSTWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS

Homology

[Close]

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot
Match: EMC10_XENLA (ER membrane protein complex subunit 10 OS=Xenopus laevis GN=emc10 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 67/219 (30.59%), Postives = 104/219 (47.49%), Query Frame = 1


Query: 73  QLEHSF--GDS-DFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDG 132
           +LEHSF   DS DF   G     L  S    QS++ L+      TE++R K   +   +G
Sbjct: 61  ELEHSFELDDSIDFKKRG----SLFWSGTAEQSISILQ---KQLTEDERNKLRDIANLNG 120

Query: 133 FYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMD-GVNILAVNYGT-PGA 192
            Y +R+   +  S E  E YV S V+A  +    L +   +H D   N++ V+  T PG+
Sbjct: 121 LYRIRIPRKLGISEEVNE-YVTSFVRACSMVESHLSDEITVHTDISGNVIGVSIVTFPGS 180

Query: 193 CPFPRQLRLPSKWSFNSLTFLKSGEQA--PRTPIFADDILVGETGEGEGVKPP--EKSFW 252
           C    ++       FN+   ++    A  P T  F + +   E  + +  K P  +KSF+
Sbjct: 181 CN-GAEVEDVDLEMFNTTVHIQQPIAAAVPETAAFIERL---EMEQAQKAKNPQEQKSFF 240

Query: 253 AKYWMYLIPLGL-IVMNAITQAMNMAEEQVGGQAAGQGQ 282
           AKYWMY+IP+ L ++M+  + A N      GG   G G+
Sbjct: 241 AKYWMYIIPVVLFLMMSGASDAGNQGGNGGGGGGGGGGR 267

[Close]

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot
Match: EMC10_XENTR (ER membrane protein complex subunit 10 OS=Xenopus tropicalis GN=emc10 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 63/219 (28.77%), Postives = 104/219 (47.49%), Query Frame = 1


Query: 73  QLEHSFGDSD---FAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDG 132
           +LEHSF   D   F   G     L  S    QS++ L+      TE++R K   +   +G
Sbjct: 57  ELEHSFELDDSIHFKKRG----SLIWSGTAEQSISILQ---KQLTEDERNKLRDIANLNG 116

Query: 133 FYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMD-GVNILAVNYGT-PGA 192
            Y +R+   +  + E  E YV S V+A  +    L +   +H D   N++ ++  T PG+
Sbjct: 117 LYRIRVPRKLGITEEANE-YVTSFVRACSMVESHLSDQISVHTDISGNVVGISIVTFPGS 176

Query: 193 CPFPRQLRLPSKWSFNSLTFLKSGEQA--PRTPIFADDILVGETGEGEGVKPP--EKSFW 252
           C    ++       FN+  +++    A  P T  F + +   E  + +  K P  +KSF+
Sbjct: 177 CN-GAEVEDVDLEMFNTTVYIQQPIAAAVPETAAFIERL---EMEQAQKAKNPQEQKSFF 236

Query: 253 AKYWMYLIPLGL-IVMNAITQAMNMAEEQVGGQAAGQGQ 282
           AKYWMY+IP+ L ++M+  + A N      GG  +G G+
Sbjct: 237 AKYWMYIIPVVLFLMMSGASDAGNQGGNGGGGGGSGGGR 263

[Close]

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot
Match: EMC10_DANRE (ER membrane protein complex subunit 10 OS=Danio rerio GN=emc10 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.1e-09
Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 1


Query: 74  LEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDGFYSV 133
           LEHSF + D  P   F  R      GG+    +  S+N  +E+DR     +   DG Y +
Sbjct: 48  LEHSF-EVDDVPR--FRLRGALQFRGGRE-NSVYLSQNQLSEKDRNTLKDVAAVDGLYRI 107

Query: 134 RLTTNVLK----SPEPGESYVYSSVKARCLPRGELDEHFVIHMD------GVNILAVNYG 193
           R+    L+    +    E Y+ + V+A  L    L +   +H D      G++I+ +   
Sbjct: 108 RVPRVSLQVDRQTERQYEGYLTAFVRACALVESHLSDVITLHTDVSGYVIGISIVTI--- 167

Query: 194 TPGACPFPRQLRLPSKWS---FNSLTFLKSGEQAPRTPIFADDILVGETG-EGEGVKPP- 253
            PG+C   R + +  +     FN+   + +   AP  P  A  I   E   E +G  P  
Sbjct: 168 -PGSC---RGIEVEDEVDLEVFNTTISVMAPVTAP-VPETAPYIERMEMEMEKKGKNPQE 227

Query: 254 EKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAG 279
           +KSF+AKYWMY++PL L +M      M+ A++Q GG A G
Sbjct: 228 QKSFFAKYWMYIVPLVLFLM------MSGAQDQSGGGAGG 249

[Close]

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot
Match: EMC10_HUMAN (ER membrane protein complex subunit 10 OS=Homo sapiens GN=EMC10 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-08
Identity = 65/215 (30.23%), Postives = 93/215 (43.26%), Query Frame = 1


Query: 74  LEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDGFYSV 133
           LEHSF   D A       R + S    Q    L  S+   +EE+R +   +   +G Y V
Sbjct: 56  LEHSFEIDDSA-----NFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRV 115

Query: 134 RLTTN--VLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGV-NILAVNYGT-PGACP 193
           R+      L   E G  YV S V A  L    L +   +H+D   N++ V+  T PG C 
Sbjct: 116 RIPRRPGALDGLEAG-GYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCR 175

Query: 194 FPRQLRLPSKWSFNSLTFLKSGEQAP--RTPIFADDILVGETGEGEGVKPP--EKSFWAK 253
              ++       FN+   L+    AP   T  F + +   E  + +  K P  +KSF+AK
Sbjct: 176 -GHEVEDVDLELFNTSVQLQPPTTAPGPETAAFIERL---EMEQAQKAKNPQEQKSFFAK 235

Query: 254 YWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQG 281
           YWMY+IP+ L +M +            GGQ  G G
Sbjct: 236 YWMYIIPVVLFLMMS-------GAPDTGGQGGGGG 253

[Close]

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot
Match: EMC10_BOVIN (ER membrane protein complex subunit 10 OS=Bos taurus GN=EMC10 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-08
Identity = 64/215 (29.77%), Postives = 92/215 (42.79%), Query Frame = 1


Query: 74  LEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALLQEDGFYSV 133
           LEHSF   D A       R + S    Q    L  S+    EE+R +   +   +G Y V
Sbjct: 56  LEHSFEIDDSAHF-----RKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNGLYRV 115

Query: 134 RLTTN--VLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGV-NILAVNYGT-PGACP 193
           R+         PE G  YV S V A  L    L +   +H+D   N++ V+  T PG C 
Sbjct: 116 RVPRRPGAPDGPEAG-GYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTYPGGCR 175

Query: 194 FPRQLRLPSKWSFNSLTFLKSGEQAP--RTPIFADDILVGETGEGEGVKPP--EKSFWAK 253
              ++       FN+   L+    AP   T  F + +   E  + +  K P  +KSF+AK
Sbjct: 176 -GHEVEDVDLELFNTSVQLQPPVTAPGPETAAFIERL---EMEQAQKAKNPQEQKSFFAK 235

Query: 254 YWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQG 281
           YWMY++P+ L +M +            GGQ  G G
Sbjct: 236 YWMYIVPVVLFLMMS-------GAPDAGGQGGGGG 253

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL
Match: A0A067K3Q3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18048 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.5e-103
Identity = 202/299 (67.56%), Postives = 234/299 (78.26%), Query Frame = 1


Query: 7   FIFCLLICSSVAFQSDELLVDDDEF--EGTQ---QIQYTDAAQTRSTPPPSRTT--STRR 66
           F  CLL  S  AFQSDELLVDD+EF  EG     Q + +D A TRS+P P+ TT  STRR
Sbjct: 10  FTVCLLTSSFRAFQSDELLVDDEEFGIEGASSRPQQRSSDPANTRSSPTPATTTPTSTRR 69

Query: 67  RFSDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRK 126
           +FSDPD DSK+QF LEH+FGDSDF PAG F+ARLKT  HGGQ+LTKLRFSR+ FT+ +++
Sbjct: 70  KFSDPDSDSKIQFTLEHAFGDSDFVPAGTFSARLKTWGHGGQTLTKLRFSRDSFTQVEKE 129

Query: 127 KFTALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILA 186
           KF  LL  D FY +RL +NVL SP PG  YV SSVKARCLPR  LDEHFVIHM+GVNILA
Sbjct: 130 KFEKLLLGDEFYRIRLPSNVL-SP-PGRDYVVSSVKARCLPREGLDEHFVIHMEGVNILA 189

Query: 187 VNYGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPE 246
           VNYG PGACP+PRQ++LP+KWSFNS T LK+ EQAPRTPIF ++  +GE GEGE V+PPE
Sbjct: 190 VNYGAPGACPYPRQMKLPAKWSFNSHTVLKNSEQAPRTPIFTEE-TIGENGEGEAVQPPE 249

Query: 247 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           +SFWAKYWMYLIPLGLIVMNA+TQAMN+ EEQ  GQA          SAAA+QRGPGS+
Sbjct: 250 RSFWAKYWMYLIPLGLIVMNAVTQAMNLPEEQAMGQAGA-------PSAAAVQRGPGSA 298

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL
Match: M5W0B8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009085mg PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.6e-102
Identity = 201/297 (67.68%), Postives = 233/297 (78.45%), Query Frame = 1


Query: 9   FCLLICSSVA--FQSDELLVDDDEF--EGTQQIQYTDAAQTRSTPPPSR--TTST-RRRF 68
           F  L+C SVA  FQSDELL+DD+EF  EG    +  D   TRS+PPP    T+ST R+RF
Sbjct: 14  FSALLCISVAAAFQSDELLLDDEEFGLEGGLHTKSPDLTYTRSSPPPPSPPTSSTSRKRF 73

Query: 69  SDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKF 128
           SDPD DSK+QFQL H+FGDSDF+PAG F+ARLKT +HGGQ+LTKLRFSRN FTEE+++KF
Sbjct: 74  SDPDSDSKIQFQLHHAFGDSDFSPAGTFSARLKTWNHGGQTLTKLRFSRNAFTEEEKEKF 133

Query: 129 TALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVN 188
             LL+ D FY +RL ++VL  P  G  YV SSVKARCLPR  LDEHFVIH DG+NILAVN
Sbjct: 134 ALLLKGDDFYRIRLPSSVLNPP--GRDYVISSVKARCLPRDGLDEHFVIHTDGINILAVN 193

Query: 189 YGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKS 248
           YG+PGACP+PRQ++LP KWSFNS T LK+ EQAPR P+FA++IL GE GEGE V PPE+S
Sbjct: 194 YGSPGACPYPRQMKLPGKWSFNSHTVLKNSEQAPRAPVFAEEILGGELGEGEVVPPPERS 253

Query: 249 FWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
            WAKYWMYLIPLGLIVMNAITQAMNMAEE   GQ AGQ Q QP    AA+QRG  S+
Sbjct: 254 LWAKYWMYLIPLGLIVMNAITQAMNMAEEPGAGQPAGQAQ-QP----AAVQRGSSSA 303

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL
Match: V4SMJ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012322mg PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 5.8e-100
Identity = 202/297 (68.01%), Postives = 232/297 (78.11%), Query Frame = 1


Query: 7   FIFCLLIC-SSVAFQSDELLVDDDEF--EGTQ--QIQYTDAAQTRSTPPPSRTTSTRRRF 66
           F   LL C SS+AF+SDELLVDD+EF  EG    QI+  + A TRST     TT+TRR+ 
Sbjct: 14  FFSLLLFCHSSLAFESDELLVDDEEFGLEGGSKPQIKPREPAPTRST-----TTTTRRKV 73

Query: 67  SDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKF 126
           SD D DSK+QF LEH+FGDSDF PAG F+ARLKTSSHGGQ+LTKLRFSRN FT ED++KF
Sbjct: 74  SDQDSDSKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKF 133

Query: 127 TALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVN 186
             LLQ+D FY +RL +N + SP PG  Y+ SSVKARCLPR  LDEHFVIHM+GVNILAVN
Sbjct: 134 EKLLQDDDFYRIRLPSNTV-SP-PGRDYIISSVKARCLPREGLDEHFVIHMEGVNILAVN 193

Query: 187 YGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKS 246
           YG  GAC +PRQL+LP KWSFNS T LK+ EQAPR PIFA+++L GE GEGE + PPE+S
Sbjct: 194 YGAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAPRAPIFAEEVL-GENGEGEIIPPPERS 253

Query: 247 FWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           FWAKYWMYLIPLGLIV+NA+TQAMNM EE V      QG  Q QQSAAAIQRG GS+
Sbjct: 254 FWAKYWMYLIPLGLIVINAVTQAMNMPEEGV------QGGGQTQQSAAAIQRGTGSA 296

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL
Match: A0A067E249_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022239mg PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 7.5e-100
Identity = 202/297 (68.01%), Postives = 232/297 (78.11%), Query Frame = 1


Query: 7   FIFCLLIC-SSVAFQSDELLVDDDEF--EGTQ--QIQYTDAAQTRSTPPPSRTTSTRRRF 66
           F   LL C SS+AF+SDELLVDD+EF  EG    QI+  + A TRST     TT+TRR+ 
Sbjct: 14  FFSLLLFCHSSLAFESDELLVDDEEFGLEGGSKPQIKPHEPAPTRST-----TTTTRRKV 73

Query: 67  SDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKF 126
           SD D DSK+QF LEH+FGDSDF PAG F+ARLKTSSHGGQ+LTKLRFSRN FT ED++KF
Sbjct: 74  SDQDSDSKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKF 133

Query: 127 TALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVN 186
             LLQ+D FY +RL +N + SP PG  Y+ SSVKARCLPR  LDEHFVIHM+GVNILAVN
Sbjct: 134 EKLLQDDDFYRIRLPSNTV-SP-PGRDYIISSVKARCLPREGLDEHFVIHMEGVNILAVN 193

Query: 187 YGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKS 246
           YG  GAC +PRQL+LP KWSFNS T LK+ EQAPR PIFA+++L GE GEGE + PPE+S
Sbjct: 194 YGAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAPRAPIFAEEVL-GENGEGEIIPPPERS 253

Query: 247 FWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           FWAKYWMYLIPLGLIV+NA+TQAMNM EE V      QG  Q QQSAAAIQRG GS+
Sbjct: 254 FWAKYWMYLIPLGLIVINAVTQAMNMPEEGV------QGGGQTQQSAAAIQRGTGSA 296

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL
Match: W9S3W5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005580 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.4e-98
Identity = 196/292 (67.12%), Postives = 225/292 (77.05%), Query Frame = 1


Query: 7   FIFCLLICSSVAFQSDELLVDDDEFE---GTQQIQYTDAAQTRSTPPPSRTTSTRRRFSD 66
           F+   +  SS+AFQSDELLVDDDEF    G  + +  D A  RS P    TTSTR+RFSD
Sbjct: 12  FLALFVAASSLAFQSDELLVDDDEFGLEGGVVRTKSPDVAHARSQP----TTSTRKRFSD 71

Query: 67  PDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTA 126
            D DSK+QFQLEH+FGDSDF+PAG FTARLK S+HGGQ+LTKLRFSRN  T E++ KF+ 
Sbjct: 72  LDSDSKIQFQLEHAFGDSDFSPAGTFTARLKISNHGGQTLTKLRFSRNELTAEEKDKFST 131

Query: 127 LLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVNYG 186
           LL+ED FY +RL +NVL SPE  + +V SSVKARCLPR  LDEH  IH DGVN+LAV+YG
Sbjct: 132 LLKEDDFYRIRLPSNVLNSPE--KDFVISSVKARCLPRDGLDEHIAIHTDGVNMLAVHYG 191

Query: 187 TPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDIL-VGETGEGEGVKPPEKSF 246
           +PGACP+PRQ +LPSKWSFNS T LK+ EQAPR PIF ++ L VGE  EGE VKPPEKS 
Sbjct: 192 SPGACPYPRQFKLPSKWSFNSHTVLKNSEQAPRAPIFTEESLGVGEGVEGEAVKPPEKSL 251

Query: 247 WAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRG 295
           WAKYWMYLIPLGLIVMNAITQAMN+ EE    QAAGQGQA   Q   A+QRG
Sbjct: 252 WAKYWMYLIPLGLIVMNAITQAMNLPEE----QAAGQGQA---QQPTAVQRG 290

[Close]

BLAST of Cp4.1LG18g02430.1 vs. TAIR10
Match: AT1G65270.2 (AT1G65270.2 unknown protein)

HSP 1 Score: 347.8 bits (891), Expect = 7.7e-96
Identity = 184/283 (65.02%), Postives = 221/283 (78.09%), Query Frame = 1


Query: 7   FIFCLLICSSVAFQSDELLVDDDEF--EGTQQIQYTDAAQTRSTPPPSR--TTSTRRRFS 66
           F+  L+  SS+AFQSDELLVDDDEF  EG +  + TD   + S+ P  +  T + RRR+S
Sbjct: 9   FLSFLIFSSSIAFQSDELLVDDDEFGLEGAKP-RSTDLYTSSSSSPQQQQQTPTIRRRYS 68

Query: 67  DP-DLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKF 126
           DP DLDSKVQF LEH+FGDSDF+PAG F+ARLKT SHGG++LTKLRFSRN F+ E++  F
Sbjct: 69  DPTDLDSKVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAF 128

Query: 127 TALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVN 186
             LL+ D FY +RL +NV+ SP PG  +V +SV+ARCLPR  LDEHF+IHM+G NILAV+
Sbjct: 129 KNLLKGDDFYRIRLPSNVV-SP-PGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVS 188

Query: 187 YGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKS 246
           YG+PGAC +PRQL+LP+KWSFNS T LKS EQAPRTPIF ++IL  E  EGE   PPE+S
Sbjct: 189 YGSPGACQYPRQLKLPAKWSFNSHTILKSSEQAPRTPIFTEEILGSENVEGEVEPPPERS 248

Query: 247 FWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQP 285
           FWAKYWMYLIPLGL+VMNA+TQA NMAEE  GGQA G  Q QP
Sbjct: 249 FWAKYWMYLIPLGLVVMNAVTQASNMAEEPAGGQAGG-AQVQP 287

[Close]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr
Match: gi|778664033|ref|XP_011660199.1| (PREDICTED: ER membrane protein complex subunit 10 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150
Identity = 272/299 (90.97%), Postives = 284/299 (94.98%), Query Frame = 1


Query: 1   MGFRCGF-IFCLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAAQTRSTPPPSRTTSTRR 60
           MGFRCGF IFCLLICSSVAFQSDELL+DDDEFEGTQ+IQYTDAA TRSTPPPSR TSTRR
Sbjct: 1   MGFRCGFFIFCLLICSSVAFQSDELLLDDDEFEGTQKIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRK 120
           RFSDPD DSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTK+RFSR+ FTEEDRK
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKMRFSRDAFTEEDRK 120

Query: 121 KFTALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILA 180
           KFT LLQEDGFY+VRL TNVL+S   GESYVYSSVK+RCL RGELDEHFVIHMDGVNILA
Sbjct: 121 KFTTLLQEDGFYTVRLGTNVLESS--GESYVYSSVKSRCLVRGELDEHFVIHMDGVNILA 180

Query: 181 VNYGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPE 240
           +NYGTPGACPFPRQL+LPSKWSFNS TFLKSGEQAPRTP+FA+DILVGETGEGEGVKPPE
Sbjct: 181 INYGTPGACPFPRQLKLPSKWSFNSFTFLKSGEQAPRTPVFAEDILVGETGEGEGVKPPE 240

Query: 241 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQV GQAA  GQAQPQQSAAA+QRGPGSS
Sbjct: 241 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAVQRGPGSS 295

[Close]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr
Match: gi|659085886|ref|XP_008443658.1| (PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo])

HSP 1 Score: 538.1 bits (1385), Expect = 1.1e-149
Identity = 272/299 (90.97%), Postives = 281/299 (93.98%), Query Frame = 1


Query: 1   MGFRCGF-IFCLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAAQTRSTPPPSRTTSTRR 60
           MGF CGF I CLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAA TRSTPPPSR TSTRR
Sbjct: 1   MGFHCGFFICCLLICSSVAFQSDELLVDDDEFEGTQQIQYTDAAHTRSTPPPSRPTSTRR 60

Query: 61  RFSDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRK 120
           RFSDPD DSKVQFQLEHSFGDSDFAPAGLFTARLKTS HGGQSLTK+RFSR+ FTEED K
Sbjct: 61  RFSDPDSDSKVQFQLEHSFGDSDFAPAGLFTARLKTSGHGGQSLTKMRFSRDAFTEEDSK 120

Query: 121 KFTALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILA 180
           KFT LLQEDGFY+VRL TNVLKS   GESYVYSSVK+RCL RGELDEHFVIHMDGVNILA
Sbjct: 121 KFTTLLQEDGFYTVRLGTNVLKSS--GESYVYSSVKSRCLVRGELDEHFVIHMDGVNILA 180

Query: 181 VNYGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPE 240
           +NYGTPGACPFPRQL+LPSKWSFNSLTFLKSGEQAPRTP+FA+DILVGETGEGEGVKPPE
Sbjct: 181 INYGTPGACPFPRQLKLPSKWSFNSLTFLKSGEQAPRTPVFAEDILVGETGEGEGVKPPE 240

Query: 241 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQV GQAA  GQAQPQQSAAA+QRGPGSS
Sbjct: 241 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVSGQAA--GQAQPQQSAAAVQRGPGSS 295

[Close]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr
Match: gi|729399743|ref|XP_010553848.1| (PREDICTED: ER membrane protein complex subunit 10-like [Tarenaya hassleriana])

HSP 1 Score: 385.2 bits (988), Expect = 1.2e-103
Identity = 199/294 (67.69%), Postives = 227/294 (77.21%), Query Frame = 1


Query: 7   FIFCLLICSSVAFQSDELLVDDDEF--EGTQQIQYTDAAQTRSTPPPSRTTSTRRRFSDP 66
           F  C L  +S+AFQSDELL+DDDEF  EG +         T  TPPP++  + RRRFSD 
Sbjct: 12  FFGCFLFSTSIAFQSDELLLDDDEFGLEGAKPRSAEPLHTTSPTPPPTQAPTIRRRFSDS 71

Query: 67  DLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTAL 126
           D DSK+QF LEH+FGDSDF+PAG F+ARLKT SHGGQ+LTKLRFSRN  ++ED+ KF  L
Sbjct: 72  DSDSKIQFTLEHAFGDSDFSPAGTFSARLKTWSHGGQTLTKLRFSRNGLSDEDKDKFNNL 131

Query: 127 LQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVNYGT 186
           L+ D FY +RL +NVL +P  G  YV +SVKARCL R  LDEH VIHMDGVNILAVNYG+
Sbjct: 132 LKGDDFYRIRLPSNVLSAP--GREYVIASVKARCLARDGLDEHIVIHMDGVNILAVNYGS 191

Query: 187 PGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKSFWA 246
           PGACP+PRQL+ PSKWSFNS T LKS EQAPRTPIF ++IL GE  EGE   PPE+SFWA
Sbjct: 192 PGACPYPRQLKFPSKWSFNSHTILKSSEQAPRTPIFTEEILGGEKVEGEAELPPERSFWA 251

Query: 247 KYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           KYWMY+IPLGLIVMNA+TQAMNMAEE  GGQA G  Q   QQSAAAIQRG  SS
Sbjct: 252 KYWMYVIPLGLIVMNAVTQAMNMAEEPAGGQAGGGPQG--QQSAAAIQRGSSSS 301

[Close]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr
Match: gi|1009118310|ref|XP_015875790.1| (PREDICTED: ER membrane protein complex subunit 10 [Ziziphus jujuba])

HSP 1 Score: 384.0 bits (985), Expect = 2.7e-103
Identity = 203/293 (69.28%), Postives = 232/293 (79.18%), Query Frame = 1


Query: 10  CLLICSS--VAFQSDELLVDDDEF--EGTQQIQYTDAAQTRSTPPPSRTTSTRRRFSDPD 69
           CLL  SS  +AFQSDELL+DD+EF  EG  Q +  D   TRS P    +T+TR+RFSD D
Sbjct: 14  CLLAASSWSLAFQSDELLIDDEEFGLEGGVQSKSHDLGYTRSQP----STTTRKRFSDSD 73

Query: 70  LDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRKKFTALL 129
            DSK+QF LEH+FGDSDF+  G FTARLKT +HGGQ+LTKLRFSRN FT ED++KF  LL
Sbjct: 74  SDSKIQFSLEHAFGDSDFSQTGTFTARLKTWNHGGQTLTKLRFSRNAFTTEDKEKFELLL 133

Query: 130 QEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILAVNYGTP 189
           Q D FY +RL +NVL SP PG+ +V SSVKARCLPR  LDEHFVIH DGVNILAVNYG P
Sbjct: 134 QSDDFYRIRLPSNVL-SP-PGKDFVISSVKARCLPRDGLDEHFVIHTDGVNILAVNYGAP 193

Query: 190 GACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPEKSFWAK 249
           GACP+PRQ++LP+KWSFNS T LK+ EQAPR PIF ++IL GE GEGE VKPPE+SFWAK
Sbjct: 194 GACPYPRQMKLPAKWSFNSHTVLKNSEQAPRAPIFTEEILGGEAGEGEVVKPPERSFWAK 253

Query: 250 YWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           YWMYLIPLGLIVMNAITQAMNM EEQ  GQ+AGQ Q QP    A +QRGP S+
Sbjct: 254 YWMYLIPLGLIVMNAITQAMNMPEEQAAGQSAGQTQ-QP----AVVQRGPTSN 295

[Close]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr
Match: gi|802724614|ref|XP_012085789.1| (PREDICTED: ER membrane protein complex subunit 10 [Jatropha curcas])

HSP 1 Score: 381.7 bits (979), Expect = 1.4e-102
Identity = 202/299 (67.56%), Postives = 234/299 (78.26%), Query Frame = 1


Query: 7   FIFCLLICSSVAFQSDELLVDDDEF--EGTQ---QIQYTDAAQTRSTPPPSRTT--STRR 66
           F  CLL  S  AFQSDELLVDD+EF  EG     Q + +D A TRS+P P+ TT  STRR
Sbjct: 10  FTVCLLTSSFRAFQSDELLVDDEEFGIEGASSRPQQRSSDPANTRSSPTPATTTPTSTRR 69

Query: 67  RFSDPDLDSKVQFQLEHSFGDSDFAPAGLFTARLKTSSHGGQSLTKLRFSRNVFTEEDRK 126
           +FSDPD DSK+QF LEH+FGDSDF PAG F+ARLKT  HGGQ+LTKLRFSR+ FT+ +++
Sbjct: 70  KFSDPDSDSKIQFTLEHAFGDSDFVPAGTFSARLKTWGHGGQTLTKLRFSRDSFTQVEKE 129

Query: 127 KFTALLQEDGFYSVRLTTNVLKSPEPGESYVYSSVKARCLPRGELDEHFVIHMDGVNILA 186
           KF  LL  D FY +RL +NVL SP PG  YV SSVKARCLPR  LDEHFVIHM+GVNILA
Sbjct: 130 KFEKLLLGDEFYRIRLPSNVL-SP-PGRDYVVSSVKARCLPREGLDEHFVIHMEGVNILA 189

Query: 187 VNYGTPGACPFPRQLRLPSKWSFNSLTFLKSGEQAPRTPIFADDILVGETGEGEGVKPPE 246
           VNYG PGACP+PRQ++LP+KWSFNS T LK+ EQAPRTPIF ++  +GE GEGE V+PPE
Sbjct: 190 VNYGAPGACPYPRQMKLPAKWSFNSHTVLKNSEQAPRTPIFTEE-TIGENGEGEAVQPPE 249

Query: 247 KSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQVGGQAAGQGQAQPQQSAAAIQRGPGSS 299
           +SFWAKYWMYLIPLGLIVMNA+TQAMN+ EEQ  GQA          SAAA+QRGPGS+
Sbjct: 250 RSFWAKYWMYLIPLGLIVMNAVTQAMNLPEEQAMGQAGA-------PSAAAVQRGPGSA 298

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02430.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EMC10_XENLA	2.7e-10	30.59	ER membrane protein complex subunit 10 OS=Xenopus laevis GN=emc10 PE=2 SV=1	[more]
EMC10_XENTR	1.4e-09	28.77	ER membrane protein complex subunit 10 OS=Xenopus tropicalis GN=emc10 PE=2 SV=1	[more]
EMC10_DANRE	5.1e-09	30.00	ER membrane protein complex subunit 10 OS=Danio rerio GN=emc10 PE=2 SV=1	[more]
EMC10_HUMAN	1.5e-08	30.23	ER membrane protein complex subunit 10 OS=Homo sapiens GN=EMC10 PE=1 SV=1	[more]
EMC10_BOVIN	3.3e-08	29.77	ER membrane protein complex subunit 10 OS=Bos taurus GN=EMC10 PE=2 SV=1	[more]

BLAST of Cp4.1LG18g02430.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067K3Q3_JATCU	9.5e-103	67.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18048 PE=4 SV=1	[more]
M5W0B8_PRUPE	1.6e-102	67.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009085mg PE=4 SV=1	[more]
V4SMJ7_9ROSI	5.8e-100	68.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012322mg PE=4 SV=1	[more]
A0A067E249_CITSI	7.5e-100	68.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022239mg PE=4 SV=1	[more]
W9S3W5_9ROSA	1.4e-98	67.12	Uncharacterized protein OS=Morus notabilis GN=L484_005580 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g02430.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65270.2	7.7e-96	65.02	unknown protein	[more]

BLAST of Cp4.1LG18g02430.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664033\|ref\|XP_011660199.1\|	1.3e-150	90.97	PREDICTED: ER membrane protein complex subunit 10 [Cucumis sativus]	[more]
gi\|659085886\|ref\|XP_008443658.1\|	1.1e-149	90.97	PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo]	[more]
gi\|729399743\|ref\|XP_010553848.1\|	1.2e-103	67.69	PREDICTED: ER membrane protein complex subunit 10-like [Tarenaya hassleriana]	[more]
gi\|1009118310\|ref\|XP_015875790.1\|	2.7e-103	69.28	PREDICTED: ER membrane protein complex subunit 10 [Ziziphus jujuba]	[more]
gi\|802724614\|ref\|XP_012085789.1\|	1.4e-102	67.56	PREDICTED: ER membrane protein complex subunit 10 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG18g02430	Cp4.1LG18g02430	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g02430.1	Cp4.1LG18g02430.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g02430.1:five_prime_utr:001	Cp4.1LG18g02430.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g02430.1:cds:009	Cp4.1LG18g02430.1:cds:009	CDS
Cp4.1LG18g02430.1:cds:008	Cp4.1LG18g02430.1:cds:008	CDS
Cp4.1LG18g02430.1:cds:007	Cp4.1LG18g02430.1:cds:007	CDS
Cp4.1LG18g02430.1:cds:006	Cp4.1LG18g02430.1:cds:006	CDS
Cp4.1LG18g02430.1:cds:005	Cp4.1LG18g02430.1:cds:005	CDS
Cp4.1LG18g02430.1:cds:004	Cp4.1LG18g02430.1:cds:004	CDS
Cp4.1LG18g02430.1:cds:003	Cp4.1LG18g02430.1:cds:003	CDS
Cp4.1LG18g02430.1:cds:002	Cp4.1LG18g02430.1:cds:002	CDS
Cp4.1LG18g02430.1:cds:001	Cp4.1LG18g02430.1:cds:001	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21397	NUCLEIC ACID BINGING PROTEIN	coord: 53..290 score: 9.2