Cp4.1LG18g01050.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGGAACTTTTTTTAATATAAAAAACAAGGGAGTGAATCAGCAACCTCTCCGGCTTCCTTTCTCCCAACCTCTTCGGCTTTCTTGTTGGTCTCACTGTGCAGTAATTTGTGGCCGCCAATCCTCTCCATCTTCAACCAGGTTTCTCCAATCCGAATCTCTGTTCTTATTTCATTTGTTAATCACACATGAATTCCCTTCATCGCATTGGAAAATTCTATTTAACGAATAAGAATCGAGTTCTTGATCTGCCTCTGCAAATCAAACGAACCCATTTCGGTTCATCCTTCCACGGTAGAGCCTTGTCAAGCAGATCTTCTTCCCCTACCTCCGGTTTCGGGAAGTTTGGCAATGGCGACGATGAGTGGAATGATACTTGGGAATCTGCTTGGCTTCCGCAAGACCTTTCGCCGAAGAACAAAGCGCCATGGGAGAGCGATGTGAACTTCCCGTCTGGAAACCCTACGATTGTGTTGCCGTCGGATGTGGATGCAGACACGAAAGCGTTTGTTGAGGATATGAATGAGAATTGGAACGAGAGGCGAAAGGCATCTCAAACGCAGAAACAAGGAGTGGATCAGCAAGAGATGGAAGGTGATGGTGATGGTGGCGGCGGGTCGCTTTATAGCTTGGAAAACATTAAGAAGGATTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGTGAGTTCCTCTTTCTCTTTTGTTAATGCAAATGGTTAAATCCTCATGTTTGTGGTGTTTATCTGCTGATCATTAGTAAAGGTGTTTGTTAATTGGATTCGACCCCAAATTTTTGAGATATATGAAAGAACACAGAAAAATCATCTCTATGGAAAGGATTTCCAACACTAACTTAGAAAATAAAGGTTCCAATCCAAAAGAATTAGACCAAATAGACAATTACAAAAAGTTAGAGAGACCAATGCCCACTGCGAGGTATTGAATTTAACAATACCTTAAGCCCAAATGATAATAACTTAGAACCCTTGTCTTTAAGAGCTGGCTTGGTGTACCCCGAGCGAGCTAGAGATTAATGTTATGGTCGTGAGCATAATCTAAGGAGGGGTAGCTCAAAACCTGGTCATGAACGCATTAGATATTTACCTAAACTAGTAGGTCCTTGAATGGATCCAACGTTTGCTCCAAGACGTTGGTCTCTAACTAGAAACGTAAATGTTTGAGCTGGAGAGGCTTCGGGTCCAGTCAGCCCGTAAAACTCACTTGTAAAAAGAACACAATAAGGAAAAAATGTCTCCAAGTTACTGCCTAGCTATTTTTTTATTTCCATTTTTTTCTTGAGCTAGCACAACAAGTCTAAACTGCTATGATTGCAGGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCCTCAGAGTTCAGAAACAAACCAGATGGATGGGAAACGACATCCAAAGGCCAGGAGGGAAATGTATGGGAGATGACACAAAGGGAAGAAGACATTCTTCTTCAGGAGTTCGATCGTCGTATTGCATACAACAAATTTCAGGTGTGTTAATATTTCCTCGTTTTTCTTTTGTTGTTACCACGTTTTCTTTAACGAAAAAGGCTTCTTCTGATAAGTGACAGAACGTGTCATTAGAAAGATGAAATATACAAGGGAAAAGAAAATTTGTGTAATCACGCAACACAAAGGAAACAAAGAACACTTAGATAAACGATATAACATTTTTGTCAACTTGAGCATAGTTTAATTGGTTTTAGCATATACCGTTGACCAAGAGGTCAAATGTTAGATTACCCACCCCCATTGAACTAAAAAAATAAGCAATATAACATCCCAAAACTCTGTTGAAGACCATTCTTGTAAGCTAAATTACCAAGCTTGAAATGTACATAATCTTAAGACTTTATGGCTTCTCGTATAATTAATATAATAGCTCATTTATTGAATGAAACAATAAATAATTGCTCGTGGTATCATTTCAACTAAATCCAGAGGTAGTATGCATATAACATGGATTAAGAACTAAGAATTTTCTGATCTTTCTGGTTGTAGCTGTCAAATTCTGGCTCGGTTCACTGAGACCGGGTTGGAAAACTCTTAGGCGAGAAAAATCGCAGAAGAGAACTATAACTGACTCGTCTATGACAGGACTAGTGTTATTGCATTGTTTACAATTGAAATGGTTGATGAACTACCGATAGTGTGATGTTACAATCTTAACTTTCTTTAATCAAGGATATCATTTCGTTCATTCGAAGTTCACCACGCCCCTCTATGTTATCCCTCTACACTGTTGTTGCTCTGGATTTTCTTTCCATTTTAGAAACTCTCTCCTTAGCGTACTCGTTACCCAGTTGCTCGTTTTCATGTGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCGCTAGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGATGCCTAATCTTTCTGATTCTTCAACTCAACCCTTCAAGGAGGAAAAAGTTGCAGCTTCCCCATCTCTCACACGCTTGAAGAGGATTTAACTCTATGCAAGCTACTTCTCGGACCATCTGCCCGACTCGAAAAGGTTTGCAACCATTAGAAAAATGCATCTCATGCTCTCCAAGTATGATATTATGTTGGTCATATTGATGTTTGCTGCAAGTGCTGATTGTAATCAGAGTATCCTTGCCTGATATAGCATGAAGCAAACTGAAAGTTATGCATTTAGCTCATAGAAGAAGAATGAGTATTAACTTGGGAGACGATTGATATCTATAATGTTAGGTCATAGGAGGGAATTTATGTTTGGTTTTGGTTTAGAAGGTTTTGTTTTCCTCTGAGAACGATACTCTTTTCATCAGGAAAGTTGTTTCATTATGTACAGCCAACCAGATCGGATTGGGAAAGTATGAAACTGATAGGAACGAAATGCACATCAAGAAATCAGCTAAAAATGGAGCTTTGAAGTTCTTTTGAAATACTGCTGAGAGAAGTGTCTAGTTTTGGAATTTAAGTATGAAGATCGTCTTATGTTTTTTTTGTTTTTATTACACTTTTG AAAATGGAACTTTTTTTAATATAAAAAACAAGGGAGTGAATCAGCAACCTCTCCGGCTTCCTTTCTCCCAACCTCTTCGGCTTTCTTGTTGGTCTCACTGTGCAGTAATTTGTGGCCGCCAATCCTCTCCATCTTCAACCAGGTTTCTCCAATCCGAATCTCTGTTCTTATTTCATTTGTTAATCACACATGAATTCCCTTCATCGCATTGGAAAATTCTATTTAACGAATAAGAATCGAGTTCTTGATCTGCCTCTGCAAATCAAACGAACCCATTTCGGTTCATCCTTCCACGGTAGAGCCTTGTCAAGCAGATCTTCTTCCCCTACCTCCGGTTTCGGGAAGTTTGGCAATGGCGACGATGAGTGGAATGATACTTGGGAATCTGCTTGGCTTCCGCAAGACCTTTCGCCGAAGAACAAAGCGCCATGGGAGAGCGATGTGAACTTCCCGTCTGGAAACCCTACGATTGTGTTGCCGTCGGATGTGGATGCAGACACGAAAGCGTTTGTTGAGGATATGAATGAGAATTGGAACGAGAGGCGAAAGGCATCTCAAACGCAGAAACAAGGAGTGGATCAGCAAGAGATGGAAGGTGATGGTGATGGTGGCGGCGGGTCGCTTTATAGCTTGGAAAACATTAAGAAGGATTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCCTCAGAGTTCAGAAACAAACCAGATGGATGGGAAACGACATCCAAAGGCCAGGAGGGAAATGTATGGGAGATGACACAAAGGGAAGAAGACATTCTTCTTCAGGAGTTCGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCGCTAGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGATGCCTAATCTTTCTGATTCTTCAACTCAACCCTTCAAGGAGGAAAAAGTTGCAGCTTCCCCATCTCTCACACGCTTGAAGAGGATTTAACTCTATGCAAGCTACTTCTCGGACCATCTGCCCGACTCGAAAAGGTTTGCAACCATTAGAAAAATGCATCTCATGCTCTCCAAGTATGATATTATGTTGGTCATATTGATGTTTGCTGCAAGTGCTGATTGTAATCAGAGTATCCTTGCCTGATATAGCATGAAGCAAACTGAAAGTTATGCATTTAGCTCATAGAAGAAGAATGAGTATTAACTTGGGAGACGATTGATATCTATAATGTTAGGTCATAGGAGGGAATTTATGTTTGGTTTTGGTTTAGAAGGTTTTGTTTTCCTCTGAGAACGATACTCTTTTCATCAGGAAAGTTGTTTCATTATGTACAGCCAACCAGATCGGATTGGGAAAGTATGAAACTGATAGGAACGAAATGCACATCAAGAAATCAGCTAAAAATGGAGCTTTGAAGTTCTTTTGAAATACTGCTGAGAGAAGTGTCTAGTTTTGGAATTTAAGTATGAAGATCGTCTTATGTTTTTTTTGTTTTTATTACACTTTTG ATGAATTCCCTTCATCGCATTGGAAAATTCTATTTAACGAATAAGAATCGAGTTCTTGATCTGCCTCTGCAAATCAAACGAACCCATTTCGGTTCATCCTTCCACGGTAGAGCCTTGTCAAGCAGATCTTCTTCCCCTACCTCCGGTTTCGGGAAGTTTGGCAATGGCGACGATGAGTGGAATGATACTTGGGAATCTGCTTGGCTTCCGCAAGACCTTTCGCCGAAGAACAAAGCGCCATGGGAGAGCGATGTGAACTTCCCGTCTGGAAACCCTACGATTGTGTTGCCGTCGGATGTGGATGCAGACACGAAAGCGTTTGTTGAGGATATGAATGAGAATTGGAACGAGAGGCGAAAGGCATCTCAAACGCAGAAACAAGGAGTGGATCAGCAAGAGATGGAAGGTGATGGTGATGGTGGCGGCGGGTCGCTTTATAGCTTGGAAAACATTAAGAAGGATTATAGATTGAAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTACAGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAGTCTGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCCTCAGAGTTCAGAAACAAACCAGATGGATGGGAAACGACATCCAAAGGCCAGGAGGGAAATGTATGGGAGATGACACAAAGGGAAGAAGACATTCTTCTTCAGGAGTTCGATCGTCGTATTGCATACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCGCTAGATGGGTGGAAATACATGATAGAGGAATTTGGGCCAAATGCCAAGAAAGGAAAAGGTAGTGTTTCAAGGATGCCTAATCTTTCTGATTCTTCAACTCAACCCTTCAAGGAGGAAAAAGTTGCAGCTTCCCCATCTCTCACACGCTTGAAGAGGATTTAA MNSLHRIGKFYLTNKNRVLDLPLQIKRTHFGSSFHGRALSSRSSSPTSGFGKFGNGDDEWNDTWESAWLPQDLSPKNKAPWESDVNFPSGNPTIVLPSDVDADTKAFVEDMNENWNERRKASQTQKQGVDQQEMEGDGDGGGGSLYSLENIKKDYRLKKQRIHANLWMKEIEKQEEARLGDSITGSGDDIERLMDSCSEIFESVNDDLNHSKVPSSSEFRNKPDGWETTSKGQEGNVWEMTQREEDILLQEFDRRIAYNKFQIASFIKTHIFSRRRPLDGWKYMIEEFGPNAKKGKGSVSRMPNLSDSSTQPFKEEKVAASPSLTRLKRI
BLAST of Cp4.1LG18g01050.1 vs. TrEMBL
Match: A0A0A0LZT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600820 PE=4 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 7.0e-156 Identity = 283/332 (85.24%), Postives = 301/332 (90.66%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TrEMBL
Match: A0A067KYD9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15584 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 8.1e-112 Identity = 211/328 (64.33%), Postives = 255/328 (77.74%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TrEMBL
Match: F6H939_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01100 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 9.9e-110 Identity = 199/273 (72.89%), Postives = 229/273 (83.88%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TrEMBL
Match: M5XE32_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008967mg PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 6.4e-109 Identity = 206/301 (68.44%), Postives = 240/301 (79.73%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TrEMBL
Match: M5XCW9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009082mg PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108 Identity = 206/314 (65.61%), Postives = 243/314 (77.39%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TAIR10
Match: AT2G02880.1 (AT2G02880.1 mucin-related) HSP 1 Score: 356.7 bits (914), Expect = 1.6e-98 Identity = 183/280 (65.36%), Postives = 221/280 (78.93%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. TAIR10
Match: AT5G62270.2 (AT5G62270.2 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25 Identity = 101/369 (27.37%), Postives = 171/369 (46.34%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. NCBI nr
Match: gi|449452692|ref|XP_004144093.1| (PREDICTED: uncharacterized protein LOC101222958 [Cucumis sativus]) HSP 1 Score: 558.1 bits (1437), Expect = 1.0e-155 Identity = 283/332 (85.24%), Postives = 301/332 (90.66%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. NCBI nr
Match: gi|659100348|ref|XP_008451050.1| (PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo]) HSP 1 Score: 545.0 bits (1403), Expect = 8.8e-152 Identity = 275/334 (82.34%), Postives = 300/334 (89.82%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. NCBI nr
Match: gi|1009154272|ref|XP_015895079.1| (PREDICTED: uncharacterized protein LOC107428984 [Ziziphus jujuba]) HSP 1 Score: 436.0 bits (1120), Expect = 5.7e-119 Identity = 226/329 (68.69%), Postives = 260/329 (79.03%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. NCBI nr
Match: gi|802566467|ref|XP_012067615.1| (PREDICTED: uncharacterized protein LOC105630417 [Jatropha curcas]) HSP 1 Score: 411.8 bits (1057), Expect = 1.2e-111 Identity = 211/328 (64.33%), Postives = 255/328 (77.74%), Query Frame = 1
BLAST of Cp4.1LG18g01050.1 vs. NCBI nr
Match: gi|694361237|ref|XP_009360356.1| (PREDICTED: uncharacterized protein LOC103950840 [Pyrus x bretschneideri]) HSP 1 Score: 406.0 bits (1042), Expect = 6.3e-110 Identity = 214/325 (65.85%), Postives = 249/325 (76.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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