Cp4.1LG18g00940.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTGCTTTCCATGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCGCCCCCCAAATCCCCTGGTCTGTTCTTCTCCATTCATCCCCCCCACTAAGTCATATCATATTGATAATTAATATAATGTATTTTGATGTTATAAGCTTATATCATCATTTTGATATCTTAATATTTTTGAAGTATGAGATTTAAAAAAAATAACCTAAGGGTAATATTTATTTAGCCAAATACAAAACTGAAAAATGAAATGCCAGCAATATCGAAAAAAGAATAATTTAAGAGCATGAAATTAAATAATATCTTTTAGTATGAATGAAGAGAGTATGGGTTAAATTTTGAAGAATGGGACTTAAATTAAACAGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGTCTTTAAGGCTACCCTACAAAGCGGCCAGGTAACTAACCAAAATTTCCGAGCATAGATTAAGGGGACGTTTAGATTGCCTTTCTACGTGCTTAAAGAAGTGTTTCTAAGTGGGGAAAAATATGGCTTTAAGCAATTAGAAAGTCGATCCAAACAAGTCCGGGATATTAACTCTCCTCGTTCGTAATATTCTAAGAAGGAATGTTCATAGAGATTGTTTGTTTGGGTTGTGTGTTTTTATTTAAGGTGGTGGCTGTGAAGCAGCTGGATAGAAATGGGCTACAAGGAAACAAGGATTTTCTTGGTGAGGTCAACGAATTGAGCCTTCTAAGCCATCCAAATCTTGTGAAGTTCAATGGATATTGTGCAGATGGAGATCAAAGGATTTTGGTCTATGAATATATGCCAGGAGGTTCTTTGGGAGATCGTCTCTTTGGTATGTACTCCGAGTACTATAAATTCAATTCTCTAAACTTAGGAACTTGTTACATTATTGAGATATCATGTGGTTTGATTATAAGGTAAATGTTGATGGATTGATTTAGCATCATGATGTGTAAAATAATGTAGTTCATGCAAAATGCATACCATTTTTTATCTGGCTGCATCGTCGACCTCAAGATCCAGTAATTTGTTTGCCAAATAATATCCAATCAGCTACCTATTAAACAAACATGTTTCATTAAACTATGTTTCAATATTGGCAGACATAAAAGAGGATCAAAAGCCATTGGATTGGTTTGTTCGTATAAAGATAGCATCAGGAGTTGCAAAAGGATTGGAATACCTGCATGATCAAGCAGATCCTCCCATAATATTTCGTGATTTGAAGTCATCAAACATCTTGCTAGATGAGGATTTTAATCCAAAGCTTTCTGATTTCGGGCTCGCAAAGCTCGGCTCTGGCGGTGATAAGTCACCGTTGCCATCGAGGGTCATGGGCACCTATGGTTACTCTGCTCCTGAATACACAAGTGGTGGACAACTCACTTCCAAGTCTGATATTTACAGCTTTGGAGTTGTGATGCTTGAACTCATTACCGGAAGAAAAGCCGTTGACACTACAAAGCCACATAACGAGCAGAATCTTGTTACTTGGGTATGTTTTTCTTTTTAATTTGTGTTTGGATTTAAATTTGGTGGATCCAACTTATAAAAACATGCTTAATGCAAAGAATCAGGCATAATGTTTGAAACTATAAAACTAAAAATTCAATCATTAACAAATAAACCCAAATTTAGGAAACTTAGTTGAGTTTCTAACTTTCAGATGAAGGATCATTGAAAACTATATGGGTTATATGAACAGTTTGAAATTTCTAGTGAGATTCACATGCAGAAATAAACAGCTAAAAAAATGAACTCACAATATAGAGGCCTTTTCCTTCTGCCTTGCCCAAGAATTTATCAATTGGACAATGATTTCAGTACTCCTTTAAATTATGTGAGCTTTGAAGCCATGGCTGTGTAACAGGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGATGAGGAGGAGGATGAGGAGGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATAGGAAAAGGAGACAAAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAAACAATTCGAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAAAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAAATGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGTAGGGAATCGAAATCTGGCGAAGGTCAAAACAACTCCAGAAGCGATTCCGACGGCGTCTCTGAACATGACGGCAAAGATTGA ATGAGCTGCTTTCCATGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCGCCCCCCAAATCCCCTGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGATGAGGAGGAGGATGAGGAGGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATAGGAAAAGGAGACAAAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAAACAATTCGAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAAAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAAATGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGTAGGGAATCGAAATCTGGCGAAGGTCAAAACAACTCCAGAAGCGATTCCGACGGCGTCTCTGAACATGACGGCAAAGATTGA ATGAGCTGCTTTCCATGTTTCTCGTCTCAGAAGAGCAAGAAAGGAATCGATAAGAACGGCAATGACAATGCTTCCTCATCCTCCTCCGGCCACCGCACTCCTCCGCCCCCCAAATCCCCTGAGACTACCACACCGAAGCCTCCTGAGGAAGTCAAGGACAAACCACAAGAAGGTGAAAAAATAGATGCCCAAAGCTTCACTTTCCGGGAGCTAGCCACTGCTACAAAGAATTTCCGTCAGGAATGTCTTTTGGGCGAAGGTGGATTTGGGAAAGCACAACCATTTTTCCGAGATCCAAAGAGATTTCCAGACCTGGCCGATCCACTCCTCGGGCGATTGTTCCCGGAGAAAGATCTGAATCAGGCCGTTGCCGTCACCGCCATGTGTCTGCAAGAGGAAGCAGAAGTCCGTCCTCTGATCGCCGACGTCATGACGGCTCTCAGTTTTCTTTCCACAGTTCCAGACGAGAATCTCACTCCACTCCCTTATCCACCGGAACCCGAGCCTGAGGATGAGGAGGAGGATGAGGAGGATGCAGGCGACGATTACTCTTCAGAATCTTCGGATTCCGATACCGAATCTCGAAAAATAGGAAAAGGAGACAAAGACGGCGCATCTGCAAATTTCACAAGCGCAAGAAACCACGACTCAGATACCTCAGATGATGAAGATGAACAAAAAAACAATTCGAGCAAGAAGAAACCTAAAAACAAAGACTCTGAACAAAAACGAGTGGTATTCAAAGACGACGTACAGCCAAATCACAGCAGAAAAAACAGCTCCTCATCGAGCGATGGAGGCTCACCTAGAAGCAGCAACGCATCAGAAAATAGAAGAATCGACAGCAGAGATTCATCTTTCAAAATGCAAAAAGAAGCTTCGGATATTGTAAATAGTACCGATTCTACATTAGAGCATAAGAGCAGTAGGGAATCGAAATCTGGCGAAGGTCAAAACAACTCCAGAAGCGATTCCGACGGCGTCTCTGAACATGACGGCAAAGATTGA MSCFPCFSSQKSKKGIDKNGNDNASSSSSGHRTPPPPKSPETTTPKPPEEVKDKPQEGEKIDAQSFTFRELATATKNFRQECLLGEGGFGKAQPFFRDPKRFPDLADPLLGRLFPEKDLNQAVAVTAMCLQEEAEVRPLIADVMTALSFLSTVPDENLTPLPYPPEPEPEDEEEDEEDAGDDYSSESSDSDTESRKIGKGDKDGASANFTSARNHDSDTSDDEDEQKNNSSKKKPKNKDSEQKRVVFKDDVQPNHSRKNSSSSSDGGSPRSSNASENRRIDSRDSSFKMQKEASDIVNSTDSTLEHKSSRESKSGEGQNNSRSDSDGVSEHDGKD
BLAST of Cp4.1LG18g00940.1 vs. Swiss-Prot
Match: Y3707_ARATH (Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.8e-19 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. Swiss-Prot
Match: LIPG1_ARATH (Receptor-like kinase LIP1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.9e-14 Identity = 94/258 (36.43%), Postives = 133/258 (51.55%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. Swiss-Prot
Match: CDL1_ARATH (Serine/threonine-protein kinase CDL1 OS=Arabidopsis thaliana GN=CDL1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.7e-12 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. Swiss-Prot
Match: LIPG2_ARATH (Receptor-like kinase LIP2 OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.1e-11 Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.4e-08 Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TrEMBL
Match: A0A0A0LY64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662820 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77 Identity = 221/341 (64.81%), Postives = 242/341 (70.97%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TrEMBL
Match: W9SA67_9ROSA (Serine/threonine-protein kinase OS=Morus notabilis GN=L484_006459 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 89/234 (38.03%), Postives = 130/234 (55.56%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TrEMBL
Match: B9RFT5_RICCO (Receptor serine-threonine protein kinase, putative OS=Ricinus communis GN=RCOM_1437210 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.2e-19 Identity = 97/239 (40.59%), Postives = 131/239 (54.81%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TrEMBL
Match: R0G911_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015236mg PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17 Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TrEMBL
Match: D7L628_ARALL (Kinase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_340899 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TAIR10
Match: AT3G07070.1 (AT3G07070.1 Protein kinase superfamily protein) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TAIR10
Match: AT4G13190.1 (AT4G13190.1 Protein kinase superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-19 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TAIR10
Match: AT5G16500.1 (AT5G16500.1 Protein kinase superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15 Identity = 94/258 (36.43%), Postives = 133/258 (51.55%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TAIR10
Match: AT3G24790.1 (AT3G24790.1 Protein kinase superfamily protein) HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. TAIR10
Match: AT5G02800.1 (AT5G02800.1 Protein kinase superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. NCBI nr
Match: gi|778664208|ref|XP_004142598.2| (PREDICTED: serine/threonine-protein kinase At3g07070-like [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 1.9e-77 Identity = 221/341 (64.81%), Postives = 242/341 (70.97%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. NCBI nr
Match: gi|659086070|ref|XP_008443749.1| (PREDICTED: serine/threonine-protein kinase At3g07070-like isoform X2 [Cucumis melo]) HSP 1 Score: 197.2 bits (500), Expect = 4.5e-47 Identity = 139/227 (61.23%), Postives = 157/227 (69.16%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. NCBI nr
Match: gi|659086068|ref|XP_008443748.1| (PREDICTED: serine/threonine-protein kinase At3g07070-like isoform X1 [Cucumis melo]) HSP 1 Score: 197.2 bits (500), Expect = 4.5e-47 Identity = 139/227 (61.23%), Postives = 157/227 (69.16%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. NCBI nr
Match: gi|703148310|ref|XP_010109313.1| (Serine/threonine-protein kinase [Morus notabilis]) HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19 Identity = 89/234 (38.03%), Postives = 130/234 (55.56%), Query Frame = 1
BLAST of Cp4.1LG18g00940.1 vs. NCBI nr
Match: gi|223548565|gb|EEF50056.1| (receptor serine-threonine protein kinase, putative [Ricinus communis]) HSP 1 Score: 103.2 bits (256), Expect = 8.9e-19 Identity = 97/239 (40.59%), Postives = 131/239 (54.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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