Cp4.1LG17g10750.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g10750.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GRAS family transcription factor
Location	Cp4.1LG17 : 8221440 .. 8222819 (+)
Sequence length	1248

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCTCCACCAGCCAGTCGTCGGAGTACTCACTCGACCACTCTCCGCCCGCCGCTGCTGGAAAATGGTCCTCCACCCTTCTCAACGAGTGTGCTCGAGCTATCTCCGACAAAGACTCCAACAAAATCCACCATCTTCTTTGGATGTTGAACGAGCTCGCCTCCCCGTACGGCGACTCCGATCAGAAATTGGCTTATTACTTCTTGCAAGCTCTCTTTTGCAGAGCTACCGAAACCGGCCTCACTTGCTACAAAACCCTCGTCACCGTTTCCGAGAAGAATTACTCCTTCGACTCCGCTCTCAAGCTCATCCTCAAGTTTCAAGAGGTAACCGTCTAAAATCATCACTAAACTCAAAAGTTTAGCTTCGATTTATAACAAAATTAGAATACCGAAACGTTAATTCAAAAATTTAAGTTGATGGGTTATAGCAAAATTTAATTTTTTTTCTTTCTTTAGGTAAGTCCGTGGATGACATTCGGGCACGTGGCATCGAACGGAGCAATTCTCGAAGCTCTCGAGCGAGAAACGAAGCTACATATCATCGACATAAGCGACACCCTTTGCACCCAATGGCCAACACTATTAGAATCGCTAGCTACACGCAATGATGACACTCCACATCTCAAGCTCACGGTGGTATCAACAACAACAAAGGTGAAGTCTTTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCTTTCGAGTTCAATCCCATAACGAATCTTAACCAATTAAGCGACCTCGAGAACGAAGCTCTCAAAGTAGAAGAAGACGAAGCCATCGCTATAAATTGCAATGGAGCTTTAAGAACGGTAAAAATCGAGGAGAGAAACGCTGTGATTTCAATGTTGAAATCGTTAAAGCCTCGAGTTTTGACAATTGTTGAAGAAGAAGCTGATTTCATAAGCTCGAAAAATAAGTTTTTGAGCTGTTTCGATGAGTGTCTTAGATTTTACACGCTCTACTTCGAGATGTTGGAAGAGAGCTTTGAAGCAACGAGTAATGAGAAATTGGGTTTAGAAAGAGAGTGTTCGAGAAATATTGTGAGGCTCTTGGGGTGTGGTAATGAAACCGAACTCGAACGAGAGTTAACGAGCGAGAGAAGAGAAAAGGGAAAGCAATGGAGCGAAAGGCTTGAAGAACGAGGTTTTTCATCGGCTCGATTTTGTGACGATGTGATGGACGACGTTAAGGCTTTGCTCAAAAGGTATAAACCCGGTTGGGCGTTGATGCATCGGACCGGTGCTATCGACACGAACCGAGATGAAGAAGAAGGTGGTGATGATTCGAGTGGAATTTATTTGACATGGAAGGAAGAACCAGTGGTGTGGATTTCAGCATGGAAACCCTAG

mRNA sequence

ATGCAAAGCTCCACCAGCCAGTCGTCGGAGTACTCACTCGACCACTCTCCGCCCGCCGCTGCTGGAAAATGGTCCTCCACCCTTCTCAACGAGTGTGCTCGAGCTATCTCCGACAAAGACTCCAACAAAATCCACCATCTTCTTTGGATGTTGAACGAGCTCGCCTCCCCGTACGGCGACTCCGATCAGAAATTGGCTTATTACTTCTTGCAAGCTCTCTTTTGCAGAGCTACCGAAACCGGCCTCACTTGCTACAAAACCCTCGTCACCGTTTCCGAGAAGAATTACTCCTTCGACTCCGCTCTCAAGCTCATCCTCAAGTTTCAAGAGGTAAGTCCGTGGATGACATTCGGGCACGTGGCATCGAACGGAGCAATTCTCGAAGCTCTCGAGCGAGAAACGAAGCTACATATCATCGACATAAGCGACACCCTTTGCACCCAATGGCCAACACTATTAGAATCGCTAGCTACACGCAATGATGACACTCCACATCTCAAGCTCACGGTGGTATCAACAACAACAAAGGTGAAGTCTTTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCTTTCGAGTTCAATCCCATAACGAATCTTAACCAATTAAGCGACCTCGAGAACGAAGCTCTCAAAGTAGAAGAAGACGAAGCCATCGCTATAAATTGCAATGGAGCTTTAAGAACGGTAAAAATCGAGGAGAGAAACGCTGTGATTTCAATGTTGAAATCGTTAAAGCCTCGAGTTTTGACAATTGTTGAAGAAGAAGCTGATTTCATAAGCTCGAAAAATAAGTTTTTGAGCTGTTTCGATGAGTGTCTTAGATTTTACACGCTCTACTTCGAGATGTTGGAAGAGAGCTTTGAAGCAACGAGTAATGAGAAATTGGGTTTAGAAAGAGAGTGTTCGAGAAATATTGTGAGGCTCTTGGGGTGTGGTAATGAAACCGAACTCGAACGAGAGTTAACGAGCGAGAGAAGAGAAAAGGGAAAGCAATGGAGCGAAAGGCTTGAAGAACGAGGTTTTTCATCGGCTCGATTTTGTGACGATGTGATGGACGACGTTAAGGCTTTGCTCAAAAGGTATAAACCCGGTTGGGCGTTGATGCATCGGACCGGTGCTATCGACACGAACCGAGATGAAGAAGAAGGTGGTGATGATTCGAGTGGAATTTATTTGACATGGAAGGAAGAACCAGTGGTGTGGATTTCAGCATGGAAACCCTAG

Coding sequence (CDS)

ATGCAAAGCTCCACCAGCCAGTCGTCGGAGTACTCACTCGACCACTCTCCGCCCGCCGCTGCTGGAAAATGGTCCTCCACCCTTCTCAACGAGTGTGCTCGAGCTATCTCCGACAAAGACTCCAACAAAATCCACCATCTTCTTTGGATGTTGAACGAGCTCGCCTCCCCGTACGGCGACTCCGATCAGAAATTGGCTTATTACTTCTTGCAAGCTCTCTTTTGCAGAGCTACCGAAACCGGCCTCACTTGCTACAAAACCCTCGTCACCGTTTCCGAGAAGAATTACTCCTTCGACTCCGCTCTCAAGCTCATCCTCAAGTTTCAAGAGGTAAGTCCGTGGATGACATTCGGGCACGTGGCATCGAACGGAGCAATTCTCGAAGCTCTCGAGCGAGAAACGAAGCTACATATCATCGACATAAGCGACACCCTTTGCACCCAATGGCCAACACTATTAGAATCGCTAGCTACACGCAATGATGACACTCCACATCTCAAGCTCACGGTGGTATCAACAACAACAAAGGTGAAGTCTTTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCTTTCGAGTTCAATCCCATAACGAATCTTAACCAATTAAGCGACCTCGAGAACGAAGCTCTCAAAGTAGAAGAAGACGAAGCCATCGCTATAAATTGCAATGGAGCTTTAAGAACGGTAAAAATCGAGGAGAGAAACGCTGTGATTTCAATGTTGAAATCGTTAAAGCCTCGAGTTTTGACAATTGTTGAAGAAGAAGCTGATTTCATAAGCTCGAAAAATAAGTTTTTGAGCTGTTTCGATGAGTGTCTTAGATTTTACACGCTCTACTTCGAGATGTTGGAAGAGAGCTTTGAAGCAACGAGTAATGAGAAATTGGGTTTAGAAAGAGAGTGTTCGAGAAATATTGTGAGGCTCTTGGGGTGTGGTAATGAAACCGAACTCGAACGAGAGTTAACGAGCGAGAGAAGAGAAAAGGGAAAGCAATGGAGCGAAAGGCTTGAAGAACGAGGTTTTTCATCGGCTCGATTTTGTGACGATGTGATGGACGACGTTAAGGCTTTGCTCAAAAGGTATAAACCCGGTTGGGCGTTGATGCATCGGACCGGTGCTATCGACACGAACCGAGATGAAGAAGAAGGTGGTGATGATTCGAGTGGAATTTATTTGACATGGAAGGAAGAACCAGTGGTGTGGATTTCAGCATGGAAACCCTAG

Protein sequence

MQSSTSQSSEYSLDHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP

Homology

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BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 7.2e-111
Identity = 215/428 (50.23%), Postives = 289/428 (67.52%), Query Frame = 1


Query: 9   SEYSLDHSPPA----AAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQK 68
           S +S+  +PP+    A  KW+ ++L E ARA SDKD+ +   +LW LNEL+SPYGD++QK
Sbjct: 123 SAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQK 182

Query: 69  LAYYFLQALFCRATETGLTCYKTLVTVS--EKNYSFDSALKLILKFQEVSPWMTFGHVAS 128
           LA YFLQALF R T +G  CY+T+VT +  EK  SF+S  K +LKFQEVSPW TFGHVA+
Sbjct: 183 LASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAA 242

Query: 129 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKS--- 188
           NGAILEA++ E K+HI+DIS T CTQWPTLLE+LATR+DDTPHL+LT V    K  +   
Sbjct: 243 NGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQT 302

Query: 189 ----LMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALR 248
               +MKEIG RMEKFARLMGVPF+FN I ++  LS+ +   L V+ DE +AINC GA+ 
Sbjct: 303 ASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMH 362

Query: 249 TV--KIEERNAVISMLKSLKPRVLTIVEEEADFISSK-----NKFLSCFDECLRFYTLYF 308
            +  +   R+AVIS  + L+PR++T+VEEEAD +  +     ++FL  F ECLR++ + F
Sbjct: 363 GIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCF 422

Query: 309 EMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERG 368
           E  EESF  TSNE+L LER   R IV L+ C      E   ++ERRE  ++WS R+   G
Sbjct: 423 ESWEESFPRTSNERLMLERAAGRAIVDLVAC------EPSDSTERRETARKWSRRMRNSG 482

Query: 369 FSSARFCDDVMDDVKALLKRYKPG-WALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPV 416
           F +  + D+V DDV+ALL+RYK G W+++                 D++GI+L W+++PV
Sbjct: 483 FGAVGYSDEVADDVRALLRRYKEGVWSMVQ--------------CPDAAGIFLCWRDQPV 530

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BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 7.7e-105
Identity = 208/435 (47.82%), Postives = 276/435 (63.45%), Query Frame = 1


Query: 18  PAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRA 77
           P+++G+W++ LL ECARA++ +DS ++  L+WMLNELASPYGD DQKLA YFLQ LF R 
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 78  TETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEAL------- 137
           T +G    +TL T S++N SFDS  +  LKFQE+SPW  FGHVA+NGAILE+        
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 138 ------------ERETKLHIIDISDTLCTQWPTLLESLATR-NDDTPHLKLTVVSTT--- 197
                          T+LHI+D+S+T CTQWPTLLE+LATR +DDTPHL +T V  T   
Sbjct: 301 AAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAP 360

Query: 198 -TKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEE---DEAIAINC 257
               + +M+EIGQR+EKFARLMGVPF F  + +   L+DL+  AL + E     A+A+NC
Sbjct: 361 SAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNC 420

Query: 258 NGALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFIS----------SKNKFLSCFDEC 317
             ALR V    R+A ++ L+ L+PRV+T+VEEEAD  +          +   F+  F E 
Sbjct: 421 VNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEG 480

Query: 318 LRFYTLYFEMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQW 377
           LRF++ Y + LEESF  TSNE+L LER   R IV L+ C          ++ERRE    W
Sbjct: 481 LRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSC------PASQSAERRETAASW 540

Query: 378 SERLEERGFSSARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYL 416
           + R+   GFS A F +DV DDV++LL+RYK GW++    GA D     +  G  ++G +L
Sbjct: 541 ARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATD-----DAAGAAAAGAFL 600

[Close]

BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.0e-104
Identity = 208/435 (47.82%), Postives = 276/435 (63.45%), Query Frame = 1


Query: 18  PAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRA 77
           P+++G+W++ LL ECARA++ +DS ++  L+WMLNELASPYGD DQKLA YFLQ LF R 
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 78  TETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEAL------- 137
           T +G    +TL T S++N SFDS  +  LKFQE+SPW  FGHVA+NGAILE+        
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 138 ------------ERETKLHIIDISDTLCTQWPTLLESLATR-NDDTPHLKLTVVSTT--- 197
                          T+LHI+D+S+T CTQWPTLLE+LATR +DDTPHL +T V  T   
Sbjct: 301 AAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAP 360

Query: 198 -TKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEE---DEAIAINC 257
               + +M+EIGQR+EKFARLMGVPF F  + +   L+DL+  AL + E     A+A+NC
Sbjct: 361 SAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNC 420

Query: 258 NGALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFIS----------SKNKFLSCFDEC 317
             ALR V    R+A ++ L+ L+PRV+T+VEEEAD  +          +   F+  F E 
Sbjct: 421 VNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEG 480

Query: 318 LRFYTLYFEMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQW 377
           LRF++ Y + LEESF  TSNE+L LER   R IV L+ C          ++ERRE    W
Sbjct: 481 LRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSC------PASQSAERRETAASW 540

Query: 378 SERLEERGFSSARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYL 416
           + R+   GFS A F +DV DDV++LL+RYK GW++    GA D     +  G  ++G +L
Sbjct: 541 ARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATD-----DAAGAAAAGAFL 600

[Close]

BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot
Match: SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 5.2e-101
Identity = 203/432 (46.99%), Postives = 274/432 (63.43%), Query Frame = 1


Query: 22  GKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETG 81
           G+W+S LL ECAR+++ +DS ++  L+WMLNELASPYGD +QKLA YFLQ LF R T +G
Sbjct: 189 GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 248

Query: 82  LTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILE-------ALERET 141
               +TL   S++N SFDS  +  L+FQE+SPW +FGHVA+NGAILE       A   ET
Sbjct: 249 QRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 308

Query: 142 -KLHIIDISDTLCTQWPTLLESLATRN-DDTPHLKLTVV------STTTKVKSLMKEIGQ 201
            + HI+D+S+T CTQWPTLLE+LATR+ D+TPHL +T V      + T  V+ +M+EIGQ
Sbjct: 309 QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 368

Query: 202 RMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEE---DEAIAINCNGALRTV---KIE 261
           RMEKFARLMGVPF F  + +   L++L+ +AL + E     A+A+NC  +LR V   +  
Sbjct: 369 RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRAR 428

Query: 262 ERNAVISMLKSLKPRVLTIVEEEADFISS--------------KNKFLSCFDECLRFYTL 321
            R+A  + L+ L PRV+T+VEEEAD ++S              +  FL  F E LRF++ 
Sbjct: 429 RRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSA 488

Query: 322 YFEMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEE 381
           Y + LEESF  TSNE+L LER   R IV L+ C     +      ERRE    W+ R+  
Sbjct: 489 YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESM------ERRETAASWARRMRS 548

Query: 382 RGFSSARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDS---SGIYLTWK 416
            GFS   F +DV DDV++LL+RY+ GW++             E G DDS   +G++L WK
Sbjct: 549 AGFSPVAFSEDVADDVRSLLRRYREGWSM------------REAGTDDSAAGAGVFLAWK 602

[Close]

BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot
Match: SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2)

HSP 1 Score: 369.0 bits (946), Expect = 6.8e-101
Identity = 203/432 (46.99%), Postives = 274/432 (63.43%), Query Frame = 1


Query: 22  GKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETG 81
           G+W+S LL ECAR+++ +DS ++  L+WMLNELASPYGD +QKLA YFLQ LF R T +G
Sbjct: 189 GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 248

Query: 82  LTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILE-------ALERET 141
               +TL   S++N SFDS  +  L+FQE+SPW +FGHVA+NGAILE       A   ET
Sbjct: 249 PRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 308

Query: 142 -KLHIIDISDTLCTQWPTLLESLATRN-DDTPHLKLTVV------STTTKVKSLMKEIGQ 201
            + HI+D+S+T CTQWPTLLE+LATR+ D+TPHL +T V      + T  V+ +M+EIGQ
Sbjct: 309 QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 368

Query: 202 RMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEE---DEAIAINCNGALRTV---KIE 261
           RMEKFARLMGVPF F  + +   L++L+ +AL + E     A+A+NC  +LR V   +  
Sbjct: 369 RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRAR 428

Query: 262 ERNAVISMLKSLKPRVLTIVEEEADFISS--------------KNKFLSCFDECLRFYTL 321
            R+A  + L+ L PRV+T+VEEEAD ++S              +  FL  F E LRF++ 
Sbjct: 429 RRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSA 488

Query: 322 YFEMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEE 381
           Y + LEESF  TSNE+L LER   R IV L+ C     +      ERRE    W+ R+  
Sbjct: 489 YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESM------ERRETAASWARRMRS 548

Query: 382 RGFSSARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDS---SGIYLTWK 416
            GFS   F +DV DDV++LL+RY+ GW++             E G DDS   +G++L WK
Sbjct: 549 AGFSPVAFSEDVADDVRSLLRRYREGWSM------------REAGTDDSAAGAGVFLAWK 602

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL
Match: A0A0A0K966_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081510 PE=3 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 1.9e-190
Identity = 346/425 (81.41%), Postives = 377/425 (88.71%), Query Frame = 1


Query: 1   MQSSTSQSSEYSLDHSPPAAA--------GKWSSTLLNECARAISDKDSNKIHHLLWMLN 60
           MQSSTS SSEYS +HSP AAA        GKW+STLL ECARAIS+KDSNKIHH LWMLN
Sbjct: 38  MQSSTSHSSEYSPEHSPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLN 97

Query: 61  ELASPYGDSDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVS 120
           ELASPYGDSDQK+A+YFLQALFCRATETGLTCYKTLV V+EKN++FDSAL+LILKFQE S
Sbjct: 98  ELASPYGDSDQKMAFYFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEAS 157

Query: 121 PWMTFGHVASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVS 180
           PW TFGHVASNGAILEALE ETKLHIIDIS+TLCTQWPTLLESLATRNDDTPHLKLTVV+
Sbjct: 158 PWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVT 217

Query: 181 TTTKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNG 240
           TT+ VK LMKEIGQRMEKFARLMGVPFEFNPITN++ L+DL NEALKVEE EAIAINC G
Sbjct: 218 TTSIVKCLMKEIGQRMEKFARLMGVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIG 277

Query: 241 ALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLE 300
           ALR VK+EERN VISMLKSLKPRVLTIVEEEADFISSKN FL CF+ECLRFYTLYFEMLE
Sbjct: 278 ALRRVKVEERNNVISMLKSLKPRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLE 337

Query: 301 ESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSA 360
           ESF ATSNE+L LERECSR+IVRLLGC ++   E E+ SERREKGKQW++RL++  FSSA
Sbjct: 338 ESFVATSNERLVLERECSRSIVRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSA 397

Query: 361 RFCDDVMDDVKALLKRYKPGWALMH-RTGAIDTNRDEEEGGD-DSSGIYLTWKEEPVVWI 416
            F +DVMDDVKALLKRYKPGWAL+   T A+   RDEEE GD +SSGIYLTWKEEPVVW+
Sbjct: 398 NFSEDVMDDVKALLKRYKPGWALLRPATAAV---RDEEENGDGESSGIYLTWKEEPVVWV 457

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL
Match: A0A0A7DLK9_QUESU (GRAS family transcription factor SHR2 OS=Quercus suber PE=2 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 3.8e-159
Identity = 292/413 (70.70%), Postives = 340/413 (82.32%), Query Frame = 1


Query: 3   SSTSQSSEYSLDHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSD 62
           +STS+SS+  +    P+A+GKW+S LL ECA+AIS+KDS+KIH LLW+LNELASPYGD D
Sbjct: 39  TSTSRSSDSGV---LPSASGKWASRLLKECAQAISEKDSSKIHQLLWLLNELASPYGDCD 98

Query: 63  QKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVAS 122
           QKLA YFLQALFC+ATE+G  CYKTL +V++K++SFDSA KLILKFQEVSPWMTFGHVAS
Sbjct: 99  QKLASYFLQALFCKATESGQRCYKTLTSVADKSHSFDSARKLILKFQEVSPWMTFGHVAS 158

Query: 123 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMK 182
           NGAILEALE ETKLHIIDIS+TLCTQWPTLLE+LATRNDDTPHLKLTVV TT+ VKS+MK
Sbjct: 159 NGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTTSTVKSVMK 218

Query: 183 EIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIEER 242
           E+GQRMEKFARLMGVPFEFN I  LN L++L  E L V+EDEAI +NC GALR V++EER
Sbjct: 219 EVGQRMEKFARLMGVPFEFNAIMGLNHLAELTKEVLGVQEDEAIVVNCIGALRRVEVEER 278

Query: 243 NAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEK 302
            AVI M +SL+PRV+TIVEEEAD  SS++ F+ CF+ECLRFYTLYFEMLEESF  TSNE+
Sbjct: 279 GAVIQMFQSLRPRVVTIVEEEADLSSSRDDFVKCFEECLRFYTLYFEMLEESFVPTSNER 338

Query: 303 LGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDV 362
           L LER+CSR+IVR+L C +E   E +   ERRE+G QWSERL+E  FS   F DDV+DDV
Sbjct: 339 LMLERDCSRSIVRVLACDDEKSGEED--CERRERGSQWSERLKE-AFSPVGFSDDVVDDV 398

Query: 363 KALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           KALLKRYK GWAL+             +G  D SGIYLTWKEEPV+W SAWKP
Sbjct: 399 KALLKRYKAGWALV-----------LPQGDHDDSGIYLTWKEEPVLWASAWKP 434

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL
Match: A0A0D2VM14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140100 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 5.1e-156
Identity = 289/415 (69.64%), Postives = 331/415 (79.76%), Query Frame = 1


Query: 3   SSTSQSSEYSL--DHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGD 62
           +STS+SS+YS   D  P AA  KW+S LL ECARAI DKDS+KIHHLLWMLNELASPYGD
Sbjct: 78  TSTSRSSDYSAGGDGEPSAAGNKWASRLLKECARAIYDKDSSKIHHLLWMLNELASPYGD 137

Query: 63  SDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHV 122
            DQKLA YFLQALFC+ATE+G  C+KTL  V+EK++ FDSA KLILKFQEVSPW TFGHV
Sbjct: 138 CDQKLASYFLQALFCKATESGQRCFKTLTLVAEKSHCFDSARKLILKFQEVSPWTTFGHV 197

Query: 123 ASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSL 182
           A+NGAILEAL+ E KLHIIDIS+TLCTQWPTLLE+LATRNDDTPHLKLTVV T   V+S+
Sbjct: 198 AANGAILEALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTANIVRSV 257

Query: 183 MKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIE 242
           MKEI QRMEKFARLMGVPFEFN I+ LN L  L  EAL V EDEA+A+NC GALR V +E
Sbjct: 258 MKEISQRMEKFARLMGVPFEFNVISGLNHLGQLTKEALGVVEDEAVAVNCMGALRRVPVE 317

Query: 243 ERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSN 302
            R AVI M +SL P+V+T+VEEEADF S++  F+ CF+ECLRFYT+YFEMLEESF  TSN
Sbjct: 318 GRAAVIGMFRSLGPKVVTVVEEEADFSSTRYDFVKCFEECLRFYTVYFEMLEESFTPTSN 377

Query: 303 EKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMD 362
           EKL LERECSR IVR+L C ++ + E E   ERRE+G QWSERL+E  FSS  F DDV+D
Sbjct: 378 EKLMLERECSRGIVRVLACDDDQDNEGE--RERRERGSQWSERLKE-AFSSVGFSDDVVD 437

Query: 363 DVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           DVKALLKRYKPGWAL              +   + +G+YLTWKEEPVVW+SAWKP
Sbjct: 438 DVKALLKRYKPGWAL-------------AQPYQNETGLYLTWKEEPVVWVSAWKP 476

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL
Match: A0A0D2RM66_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140300 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 8.8e-156
Identity = 288/415 (69.40%), Postives = 332/415 (80.00%), Query Frame = 1


Query: 3   SSTSQSSEYSL--DHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGD 62
           +STS+SS+YS   D  P A   KW+S LL ECARAISDKDS+KIHHLLWMLNELASPYGD
Sbjct: 79  TSTSRSSDYSAGGDGDPSATGNKWASRLLKECARAISDKDSSKIHHLLWMLNELASPYGD 138

Query: 63  SDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHV 122
            +QKLA YFLQALFC+ATE+G  C+KTL  V+EK++ FDSA KLILKFQEVSPW TFGHV
Sbjct: 139 CEQKLASYFLQALFCKATESGQRCFKTLTLVAEKSHCFDSARKLILKFQEVSPWTTFGHV 198

Query: 123 ASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSL 182
           A+NGAILEAL+ E KLHIIDIS+TLCTQWPTLLE+LATRNDDTPHLKLTVV T   V+S+
Sbjct: 199 AANGAILEALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTANIVRSV 258

Query: 183 MKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIE 242
           MKEI QRMEKFARLMGVPFEFN I+ LN L  L  +AL V EDEA+A+NC GALR V +E
Sbjct: 259 MKEISQRMEKFARLMGVPFEFNVISGLNHLGQLTKDALGVVEDEAVAVNCMGALRGVPVE 318

Query: 243 ERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSN 302
           ER AVI M +SL P+V+T+VEEEADF  +++ F+ CF+ECLRFYT+YFEMLEESF  TSN
Sbjct: 319 ERAAVIGMFRSLGPKVVTVVEEEADFSRTRDDFVKCFEECLRFYTVYFEMLEESFNPTSN 378

Query: 303 EKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMD 362
           EKL LERECSR IVR+L C ++ + E E   ERRE+G QWSERL+E  FS   F DDV+D
Sbjct: 379 EKLMLERECSRGIVRVLACDDDQDNEGE--RERRERGSQWSERLKE-AFSPVGFSDDVVD 438

Query: 363 DVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           DVKALLKRYKPGWAL           D+ E     +G+YLTWKEEPVVW+SAWKP
Sbjct: 439 DVKALLKRYKPGWAL--------AQPDQNE-----TGLYLTWKEEPVVWVSAWKP 477

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL
Match: V4TWW3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020072mg PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 8.8e-156
Identity = 285/420 (67.86%), Postives = 332/420 (79.05%), Query Frame = 1


Query: 3   SSTSQSSEYSLDHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSD 62
           +STS+SS+     +      KW+S LL ECARAISDKDS+KIHHLLWMLNELASPYGD D
Sbjct: 52  TSTSRSSDSGEPCADTTGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCD 111

Query: 63  QKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVAS 122
           QKLA YFLQALFC+ATE+G  CYKTL +V+EK++SFDSA KLILKFQEVSPW TFGHVAS
Sbjct: 112 QKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVAS 171

Query: 123 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMK 182
           NGAILEAL+ ETKLHIID+S+TLCTQWPTLLE+LATRND+TPHLKLTVV T + V+ +MK
Sbjct: 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMK 231

Query: 183 EIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIEER 242
           EIGQRMEKFARLMGVPFEF  IT LN+L +L  E L V+EDEA+A+NC GALR V +EER
Sbjct: 232 EIGQRMEKFARLMGVPFEFKVITGLNRLVELTKETLGVKEDEAVAVNCIGALRRVAVEER 291

Query: 243 NAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEK 302
            AVI M +SLKP+V+TIVEEEAD  SS+  F+ CF+ECLRFYTLYFEMLEESF  TSNE+
Sbjct: 292 GAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNER 351

Query: 303 LGLERECSRNIVRLLGCGNETEL-------ERELTSERREKGKQWSERLEERGFSSARFC 362
           L LERECSR+IVR+L C ++            E   ERRE+G QW+E+L+E  FS   F 
Sbjct: 352 LMLERECSRDIVRVLACDDDNNSSNNGNGDREEEECERRERGSQWAEKLKEAAFSPVGFS 411

Query: 363 DDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           DDV+DDVKALLKRY+ GW L+             +G D++SGIYLTWKEEPVVW SAWKP
Sbjct: 412 DDVVDDVKALLKRYRAGWGLV-----------LPQGDDNTSGIYLTWKEEPVVWASAWKP 460

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10
Match: AT4G37650.1 (AT4G37650.1 GRAS family transcription factor)

HSP 1 Score: 402.1 bits (1032), Expect = 4.1e-112
Identity = 215/428 (50.23%), Postives = 289/428 (67.52%), Query Frame = 1


Query: 9   SEYSLDHSPPA----AAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQK 68
           S +S+  +PP+    A  KW+ ++L E ARA SDKD+ +   +LW LNEL+SPYGD++QK
Sbjct: 123 SAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQK 182

Query: 69  LAYYFLQALFCRATETGLTCYKTLVTVS--EKNYSFDSALKLILKFQEVSPWMTFGHVAS 128
           LA YFLQALF R T +G  CY+T+VT +  EK  SF+S  K +LKFQEVSPW TFGHVA+
Sbjct: 183 LASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAA 242

Query: 129 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKS--- 188
           NGAILEA++ E K+HI+DIS T CTQWPTLLE+LATR+DDTPHL+LT V    K  +   
Sbjct: 243 NGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQT 302

Query: 189 ----LMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALR 248
               +MKEIG RMEKFARLMGVPF+FN I ++  LS+ +   L V+ DE +AINC GA+ 
Sbjct: 303 ASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMH 362

Query: 249 TV--KIEERNAVISMLKSLKPRVLTIVEEEADFISSK-----NKFLSCFDECLRFYTLYF 308
            +  +   R+AVIS  + L+PR++T+VEEEAD +  +     ++FL  F ECLR++ + F
Sbjct: 363 GIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCF 422

Query: 309 EMLEESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERG 368
           E  EESF  TSNE+L LER   R IV L+ C      E   ++ERRE  ++WS R+   G
Sbjct: 423 ESWEESFPRTSNERLMLERAAGRAIVDLVAC------EPSDSTERRETARKWSRRMRNSG 482

Query: 369 FSSARFCDDVMDDVKALLKRYKPG-WALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPV 416
           F +  + D+V DDV+ALL+RYK G W+++                 D++GI+L W+++PV
Sbjct: 483 FGAVGYSDEVADDVRALLRRYKEGVWSMVQ--------------CPDAAGIFLCWRDQPV 530

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10
Match: AT3G49950.1 (AT3G49950.1 GRAS family transcription factor)

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-45
Identity = 126/408 (30.88%), Postives = 200/408 (49.02%), Query Frame = 1


Query: 28  LLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETGLTCYKT 87
           LL  CA AI   D+   H +LW+LN +A P GDS Q+L   FL+AL  RA     T   T
Sbjct: 30  LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89

Query: 88  LVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEALERETKLHIIDISDTLCT 147
           +  + + +     ++  +  F +++PW  FG +A+N AIL A+E  + +HI+D+S T C 
Sbjct: 90  ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCM 149

Query: 148 QWPTLLESLATR-NDDTPHLKLTVVSTTTK----VKSLMKEIGQRMEKFARLMGVPFEFN 207
           Q PTL++++A+R N   P LKLTVVS++      +    +E+G ++  FA    +  EF 
Sbjct: 150 QIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFT 209

Query: 208 --PITNLNQLSDLENEALKV---EEDEAIAINCNGALRTVKIEE--------RNAVISML 267
             P T  +  S L  + L++     +EA+ +NC+  LR +  E         R   +  L
Sbjct: 210 IVPSTYSDGFSSLLQQ-LRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQL 269

Query: 268 KSLKPRVLTIVEEEADFISSK--NKFLSCFDECLRFYTLYFEMLEESFEATSNEKLGLER 327
           +SL PR++T++EE+ D  S    N+  S F+    ++ + F+  +      S ++   E 
Sbjct: 270 RSLNPRIVTLIEEDVDLTSENLVNRLKSAFN----YFWIPFDTTDTFM---SEQRRWYEA 329

Query: 328 ECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDVKALLK 387
           E S  I  ++       +ER  T  R      W ER+ E  F   R  +D + DVKA+L+
Sbjct: 330 EISWKIENVVAKEGAERVERTETKRR------WIERMREAEFGGVRVKEDAVADVKAMLE 389

Query: 388 RYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
            +  GW +                 DD   + LTWK   VV+ + W P
Sbjct: 390 EHAVGWGMKKE--------------DDDESLVLTWKGHSVVFATVWVP 409

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10
Match: AT2G04890.1 (AT2G04890.1 SCARECROW-like 21)

HSP 1 Score: 171.8 bits (434), Expect = 8.9e-43
Identity = 114/394 (28.93%), Postives = 199/394 (50.51%), Query Frame = 1


Query: 28  LLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETGLTCYKT 87
           +L  CA+A+S+ +       +  L  + S  G+  Q+L  Y L+ L  R   +G + YK+
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 88  LVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEALERETKLHIIDISDTLCT 147
           L +   ++Y F   L  +    EV P+  FG++++NGAI EA++ E ++HIID      +
Sbjct: 113 LQSREPESYEF---LSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 148 QWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMKEIGQRMEKFARLMGVPFEFNPITNL 207
           QW  L+++ A R    P++++T V       S++  + +R+EK A+   VPF FN ++  
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGVGD----GSVLVTVKKRLEKLAKKFDVPFRFNAVSRP 232

Query: 208 NQLSDLENEALKVEEDEAIAINCNGAL-----RTVKIE-ERNAVISMLKSLKPRVLTIVE 267
           +   ++E E L V + EA+ +N    L      +V +E  R+ ++ M+KSL P+V+T+VE
Sbjct: 233 S--CEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVE 292

Query: 268 EEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEKLGLEREC-SRNIVRLLGCG 327
           +E +  ++ + FL  F E L +YT  FE ++        E++ +E+ C +R++V ++ C 
Sbjct: 293 QECN--TNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACE 352

Query: 328 NETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDVKALLKRYKPGWALMHRTG 387
               +      ER E   +W  R    GF        +   ++ALL+ Y  G+A+  R G
Sbjct: 353 GAERI------ERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDG 412

Query: 388 AIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWK 415
           A                +YL W +  +V   AWK
Sbjct: 413 A----------------LYLGWMDRILVSSCAWK 413

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10
Match: AT5G48150.1 (AT5G48150.1 GRAS family transcription factor)

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40
Identity = 116/424 (27.36%), Postives = 200/424 (47.17%), Query Frame = 1


Query: 12  SLDHSPPAAAGKWSSTL-----------LNECARAISDKDSNKIHHLLWMLNELASPYGD 71
           S D +       W STL           L  CA+A+S+ D    H ++  L ++ S  G+
Sbjct: 95  SFDSTASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGE 154

Query: 72  SDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHV 131
             Q+L  Y L+ L  +   +G + YK L    E   +    L  +    EV P+  FG++
Sbjct: 155 PIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEP--ASTELLSYMHILYEVCPYFKFGYM 214

Query: 132 ASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSL 191
           ++NGAI EA++ E ++HIID      +QW TL+++ A R    P +++T +   T   + 
Sbjct: 215 SANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYAR 274

Query: 192 ---MKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTV 251
              +  +G R+ K A+   VPFEFN ++    +S+++ + L V   EA+A+N    L  +
Sbjct: 275 GGGLSIVGNRLAKLAKQFNVPFEFNSVS--VSVSEVKPKNLGVRPGEALAVNFAFVLHHM 334

Query: 252 KIE------ERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEML 311
             E       R+ ++ M+KSL P+V+T+VE+E++  ++   F   F E + +Y   FE +
Sbjct: 335 PDESVSTENHRDRLLRMVKSLSPKVVTLVEQESN--TNTAAFFPRFMETMNYYAAMFESI 394

Query: 312 EESFEATSNEKLGLEREC-SRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFS 371
           + +      +++ +E+ C +R++V ++ C     +      ER E   +W  R    GF+
Sbjct: 395 DVTLPRDHKQRINVEQHCLARDVVNIIACEGADRV------ERHELLGKWRSRFGMAGFT 454

Query: 372 SARFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWI 415
                  V   +K+LL+ Y   + L  R GA                +YL W    +V  
Sbjct: 455 PYPLSPLVNSTIKSLLRNYSDKYRLEERDGA----------------LYLGWMHRDLVAS 490

[Close]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10
Match: AT1G50600.1 (AT1G50600.1 scarecrow-like 5)

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-39
Identity = 116/397 (29.22%), Postives = 195/397 (49.12%), Query Frame = 1


Query: 28  LLNECARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETGLTCYKT 87
           +L ECA+A+ + D      L+  L ++ S  G+  Q+L  Y L+ L  R   +G + YK 
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKA 289

Query: 88  LVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVASNGAILEALERETKLHIIDISDTLCT 147
           L     K+ +    L  +    E  P+  FG+ ++NGAI EA++ E+ +HIID   +   
Sbjct: 290 LRC---KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGG 349

Query: 148 QWPTLLESLATRNDDTPHLKLTVVS---TTTKVKSLMKEIGQRMEKFARLMGVPFEFNPI 207
           QW +L+ +L  R    P++++T +    ++   +  ++ +GQR+ K A + GVPFEF+  
Sbjct: 350 QWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGA 409

Query: 208 TNLNQLSDLENEALKVEEDEAIAINCNGAL-----RTVKIE-ERNAVISMLKSLKPRVLT 267
                 +++E E L V   EA+A+N    L      +V +E  R+ ++ ++K L P V+T
Sbjct: 410 ALC--CTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVT 469

Query: 268 IVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEKLGLEREC-SRNIVRLL 327
           +VE+EA+  ++   FL  F E +  Y   FE ++        E++ +E+ C +R +V L+
Sbjct: 470 LVEQEAN--TNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 529

Query: 328 GCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDVKALLKRYKPGWALMH 387
            C     +ERE   ER E   +W  R    GF        V   +K LL+ Y   + L  
Sbjct: 530 ACEG---VERE---ERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEE 589

Query: 388 RTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWK 415
           R GA                +YL WK +P++   AW+
Sbjct: 590 RDGA----------------LYLGWKNQPLITSCAWR 597

[Close]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr
Match: gi|449471114|ref|XP_004153213.1| (PREDICTED: protein SHORT-ROOT-like [Cucumis sativus])

HSP 1 Score: 673.3 bits (1736), Expect = 2.7e-190
Identity = 346/425 (81.41%), Postives = 377/425 (88.71%), Query Frame = 1


Query: 1   MQSSTSQSSEYSLDHSPPAAA--------GKWSSTLLNECARAISDKDSNKIHHLLWMLN 60
           MQSSTS SSEYS +HSP AAA        GKW+STLL ECARAIS+KDSNKIHH LWMLN
Sbjct: 38  MQSSTSHSSEYSPEHSPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLN 97

Query: 61  ELASPYGDSDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVS 120
           ELASPYGDSDQK+A+YFLQALFCRATETGLTCYKTLV V+EKN++FDSAL+LILKFQE S
Sbjct: 98  ELASPYGDSDQKMAFYFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEAS 157

Query: 121 PWMTFGHVASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVS 180
           PW TFGHVASNGAILEALE ETKLHIIDIS+TLCTQWPTLLESLATRNDDTPHLKLTVV+
Sbjct: 158 PWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVT 217

Query: 181 TTTKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNG 240
           TT+ VK LMKEIGQRMEKFARLMGVPFEFNPITN++ L+DL NEALKVEE EAIAINC G
Sbjct: 218 TTSIVKCLMKEIGQRMEKFARLMGVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIG 277

Query: 241 ALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLE 300
           ALR VK+EERN VISMLKSLKPRVLTIVEEEADFISSKN FL CF+ECLRFYTLYFEMLE
Sbjct: 278 ALRRVKVEERNNVISMLKSLKPRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLE 337

Query: 301 ESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSA 360
           ESF ATSNE+L LERECSR+IVRLLGC ++   E E+ SERREKGKQW++RL++  FSSA
Sbjct: 338 ESFVATSNERLVLERECSRSIVRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSA 397

Query: 361 RFCDDVMDDVKALLKRYKPGWALMH-RTGAIDTNRDEEEGGD-DSSGIYLTWKEEPVVWI 416
            F +DVMDDVKALLKRYKPGWAL+   T A+   RDEEE GD +SSGIYLTWKEEPVVW+
Sbjct: 398 NFSEDVMDDVKALLKRYKPGWALLRPATAAV---RDEEENGDGESSGIYLTWKEEPVVWV 457

[Close]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr
Match: gi|659120132|ref|XP_008460030.1| (PREDICTED: protein SHORT-ROOT-like [Cucumis melo])

HSP 1 Score: 665.2 bits (1715), Expect = 7.3e-188
Identity = 342/424 (80.66%), Postives = 370/424 (87.26%), Query Frame = 1


Query: 1   MQSSTSQSSEYSLDHSPPAAA--------GKWSSTLLNECARAISDKDSNKIHHLLWMLN 60
           MQSSTS SSEYS +HSP AAA        GKW+STLL ECARAIS+KDSNKIHH LWMLN
Sbjct: 39  MQSSTSHSSEYSPEHSPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLN 98

Query: 61  ELASPYGDSDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVS 120
           ELASPYGDSDQK+A YFLQALFCRATETGLTCYKTLV V+EKN++FDSAL+LILKFQE S
Sbjct: 99  ELASPYGDSDQKMASYFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEAS 158

Query: 121 PWMTFGHVASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVS 180
           PW TFGHVASNGAILEALE ETKLHIIDIS+TLCTQWPTLLESLATRNDDTPHLKLTVV+
Sbjct: 159 PWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVT 218

Query: 181 TTTKVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNG 240
           TT+ VK LMKEIGQRMEKFARLMGVPFEFNPITN+N L+DL NEALKVEE EAIAINC G
Sbjct: 219 TTSIVKCLMKEIGQRMEKFARLMGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIG 278

Query: 241 ALRTVKIEERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLE 300
           ALR VK+EERN VISMLK LKPRVLTIVEEEADFISS N FL CF+ECLRFYTLYFEMLE
Sbjct: 279 ALRRVKVEERNNVISMLKLLKPRVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLE 338

Query: 301 ESFEATSNEKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSA 360
           ESF ATSNE+L LERECSR+IVRLLGC ++   E E+ SERREKGKQW++RL++  FSSA
Sbjct: 339 ESFGATSNERLVLERECSRSIVRLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSA 398

Query: 361 RFCDDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGD-DSSGIYLTWKEEPVVWIS 416
            F +DVMDDVKALLKRYKPGWAL+ R        DEEE GD + SGIYLTWKEEPVVW+S
Sbjct: 399 NFSEDVMDDVKALLKRYKPGWALL-RPATAAVGVDEEENGDAEPSGIYLTWKEEPVVWVS 458

[Close]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr
Match: gi|685431531|gb|AIO08308.1| (GRAS family transcription factor SHR2 [Quercus suber])

HSP 1 Score: 569.3 bits (1466), Expect = 5.5e-159
Identity = 292/413 (70.70%), Postives = 340/413 (82.32%), Query Frame = 1


Query: 3   SSTSQSSEYSLDHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSD 62
           +STS+SS+  +    P+A+GKW+S LL ECA+AIS+KDS+KIH LLW+LNELASPYGD D
Sbjct: 39  TSTSRSSDSGV---LPSASGKWASRLLKECAQAISEKDSSKIHQLLWLLNELASPYGDCD 98

Query: 63  QKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVAS 122
           QKLA YFLQALFC+ATE+G  CYKTL +V++K++SFDSA KLILKFQEVSPWMTFGHVAS
Sbjct: 99  QKLASYFLQALFCKATESGQRCYKTLTSVADKSHSFDSARKLILKFQEVSPWMTFGHVAS 158

Query: 123 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMK 182
           NGAILEALE ETKLHIIDIS+TLCTQWPTLLE+LATRNDDTPHLKLTVV TT+ VKS+MK
Sbjct: 159 NGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTTSTVKSVMK 218

Query: 183 EIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIEER 242
           E+GQRMEKFARLMGVPFEFN I  LN L++L  E L V+EDEAI +NC GALR V++EER
Sbjct: 219 EVGQRMEKFARLMGVPFEFNAIMGLNHLAELTKEVLGVQEDEAIVVNCIGALRRVEVEER 278

Query: 243 NAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEK 302
            AVI M +SL+PRV+TIVEEEAD  SS++ F+ CF+ECLRFYTLYFEMLEESF  TSNE+
Sbjct: 279 GAVIQMFQSLRPRVVTIVEEEADLSSSRDDFVKCFEECLRFYTLYFEMLEESFVPTSNER 338

Query: 303 LGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMDDV 362
           L LER+CSR+IVR+L C +E   E +   ERRE+G QWSERL+E  FS   F DDV+DDV
Sbjct: 339 LMLERDCSRSIVRVLACDDEKSGEED--CERRERGSQWSERLKE-AFSPVGFSDDVVDDV 398

Query: 363 KALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           KALLKRYK GWAL+             +G  D SGIYLTWKEEPV+W SAWKP
Sbjct: 399 KALLKRYKAGWALV-----------LPQGDHDDSGIYLTWKEEPVLWASAWKP 434

[Close]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr
Match: gi|823250435|ref|XP_012457802.1| (PREDICTED: protein SHORT-ROOT-like [Gossypium raimondii])

HSP 1 Score: 558.9 bits (1439), Expect = 7.4e-156
Identity = 289/415 (69.64%), Postives = 331/415 (79.76%), Query Frame = 1


Query: 3   SSTSQSSEYSL--DHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGD 62
           +STS+SS+YS   D  P AA  KW+S LL ECARAI DKDS+KIHHLLWMLNELASPYGD
Sbjct: 78  TSTSRSSDYSAGGDGEPSAAGNKWASRLLKECARAIYDKDSSKIHHLLWMLNELASPYGD 137

Query: 63  SDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHV 122
            DQKLA YFLQALFC+ATE+G  C+KTL  V+EK++ FDSA KLILKFQEVSPW TFGHV
Sbjct: 138 CDQKLASYFLQALFCKATESGQRCFKTLTLVAEKSHCFDSARKLILKFQEVSPWTTFGHV 197

Query: 123 ASNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSL 182
           A+NGAILEAL+ E KLHIIDIS+TLCTQWPTLLE+LATRNDDTPHLKLTVV T   V+S+
Sbjct: 198 AANGAILEALDGEPKLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTANIVRSV 257

Query: 183 MKEIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIE 242
           MKEI QRMEKFARLMGVPFEFN I+ LN L  L  EAL V EDEA+A+NC GALR V +E
Sbjct: 258 MKEISQRMEKFARLMGVPFEFNVISGLNHLGQLTKEALGVVEDEAVAVNCMGALRRVPVE 317

Query: 243 ERNAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSN 302
            R AVI M +SL P+V+T+VEEEADF S++  F+ CF+ECLRFYT+YFEMLEESF  TSN
Sbjct: 318 GRAAVIGMFRSLGPKVVTVVEEEADFSSTRYDFVKCFEECLRFYTVYFEMLEESFTPTSN 377

Query: 303 EKLGLERECSRNIVRLLGCGNETELERELTSERREKGKQWSERLEERGFSSARFCDDVMD 362
           EKL LERECSR IVR+L C ++ + E E   ERRE+G QWSERL+E  FSS  F DDV+D
Sbjct: 378 EKLMLERECSRGIVRVLACDDDQDNEGE--RERRERGSQWSERLKE-AFSSVGFSDDVVD 437

Query: 363 DVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           DVKALLKRYKPGWAL              +   + +G+YLTWKEEPVVW+SAWKP
Sbjct: 438 DVKALLKRYKPGWAL-------------AQPYQNETGLYLTWKEEPVVWVSAWKP 476

[Close]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr
Match: gi|567900954|ref|XP_006442965.1| (hypothetical protein CICLE_v10020072mg [Citrus clementina])

HSP 1 Score: 558.1 bits (1437), Expect = 1.3e-155
Identity = 285/420 (67.86%), Postives = 332/420 (79.05%), Query Frame = 1


Query: 3   SSTSQSSEYSLDHSPPAAAGKWSSTLLNECARAISDKDSNKIHHLLWMLNELASPYGDSD 62
           +STS+SS+     +      KW+S LL ECARAISDKDS+KIHHLLWMLNELASPYGD D
Sbjct: 52  TSTSRSSDSGEPCADTTGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCD 111

Query: 63  QKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVAS 122
           QKLA YFLQALFC+ATE+G  CYKTL +V+EK++SFDSA KLILKFQEVSPW TFGHVAS
Sbjct: 112 QKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVAS 171

Query: 123 NGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTKVKSLMK 182
           NGAILEAL+ ETKLHIID+S+TLCTQWPTLLE+LATRND+TPHLKLTVV T + V+ +MK
Sbjct: 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMK 231

Query: 183 EIGQRMEKFARLMGVPFEFNPITNLNQLSDLENEALKVEEDEAIAINCNGALRTVKIEER 242
           EIGQRMEKFARLMGVPFEF  IT LN+L +L  E L V+EDEA+A+NC GALR V +EER
Sbjct: 232 EIGQRMEKFARLMGVPFEFKVITGLNRLVELTKETLGVKEDEAVAVNCIGALRRVAVEER 291

Query: 243 NAVISMLKSLKPRVLTIVEEEADFISSKNKFLSCFDECLRFYTLYFEMLEESFEATSNEK 302
            AVI M +SLKP+V+TIVEEEAD  SS+  F+ CF+ECLRFYTLYFEMLEESF  TSNE+
Sbjct: 292 GAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNER 351

Query: 303 LGLERECSRNIVRLLGCGNETEL-------ERELTSERREKGKQWSERLEERGFSSARFC 362
           L LERECSR+IVR+L C ++            E   ERRE+G QW+E+L+E  FS   F 
Sbjct: 352 LMLERECSRDIVRVLACDDDNNSSNNGNGDREEEECERRERGSQWAEKLKEAAFSPVGFS 411

Query: 363 DDVMDDVKALLKRYKPGWALMHRTGAIDTNRDEEEGGDDSSGIYLTWKEEPVVWISAWKP 416
           DDV+DDVKALLKRY+ GW L+             +G D++SGIYLTWKEEPVVW SAWKP
Sbjct: 412 DDVVDDVKALLKRYRAGWGLV-----------LPQGDDNTSGIYLTWKEEPVVWASAWKP 460

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10750.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHR_ARATH	7.2e-111	50.23	Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1	[more]
SHR2_ORYSI	7.7e-105	47.82	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1	[more]
SHR2_ORYSJ	1.0e-104	47.82	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1	[more]
SHR1_ORYSI	5.2e-101	46.99	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1	[more]
SHR1_ORYSJ	6.8e-101	46.99	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2	[more]

BLAST of Cp4.1LG17g10750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K966_CUCSA	1.9e-190	81.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081510 PE=3 SV=1	[more]
A0A0A7DLK9_QUESU	3.8e-159	70.70	GRAS family transcription factor SHR2 OS=Quercus suber PE=2 SV=1	[more]
A0A0D2VM14_GOSRA	5.1e-156	69.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140100 PE=3 SV=1	[more]
A0A0D2RM66_GOSRA	8.8e-156	69.40	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140300 PE=3 SV=1	[more]
V4TWW3_9ROSI	8.8e-156	67.86	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020072mg PE=3 SV=1	[more]

BLAST of Cp4.1LG17g10750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37650.1	4.1e-112	50.23	GRAS family transcription factor	[more]
AT3G49950.1	4.3e-45	30.88	GRAS family transcription factor	[more]
AT2G04890.1	8.9e-43	28.93	SCARECROW-like 21	[more]
AT5G48150.1	1.4e-40	27.36	GRAS family transcription factor	[more]
AT1G50600.1	2.1e-39	29.22	scarecrow-like 5	[more]

BLAST of Cp4.1LG17g10750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449471114\|ref\|XP_004153213.1\|	2.7e-190	81.41	PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]	[more]
gi\|659120132\|ref\|XP_008460030.1\|	7.3e-188	80.66	PREDICTED: protein SHORT-ROOT-like [Cucumis melo]	[more]
gi\|685431531\|gb\|AIO08308.1\|	5.5e-159	70.70	GRAS family transcription factor SHR2 [Quercus suber]	[more]
gi\|823250435\|ref\|XP_012457802.1\|	7.4e-156	69.64	PREDICTED: protein SHORT-ROOT-like [Gossypium raimondii]	[more]
gi\|567900954\|ref\|XP_006442965.1\|	1.3e-155	67.86	hypothetical protein CICLE_v10020072mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0048366	leaf development
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g10750	Cp4.1LG17g10750	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10750.1:cds:001	Cp4.1LG17g10750.1:cds:001	CDS
Cp4.1LG17g10750.1:cds:002	Cp4.1LG17g10750.1:cds:002	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10750.1	Cp4.1LG17g10750.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 27..414 score: 4.6
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 1..379 score: 48
None	No IPR available	unknown	Coil	Coil	coord: 288..308 scor
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 6..415 score: 6.5E
None	No IPR available	PANTHER	PTHR31636:SF36	SUBFAMILY NOT NAMED	coord: 6..415 score: 6.5E