Cp4.1LG17g09450.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09450.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	tRNA dimethylallyltransferase
Location	Cp4.1LG17 : 7235665 .. 7242756 (+)
Sequence length	6251

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATTTGTAACCCTCCAAGAATACAAAAAAAATTTGTAACCCTCCAAGAATAAATAAACTTGATTCATTTTAATATGACATGAATGGTAACATCTTGTAATAATTTTTATAACATTTAATTTCATTGTAATATAACTCTAGTTTTCACGATTTGAATCTCCAACGACTATATCCTTACCTGTCTCAATGATACTTCCTTAGCAAACTCATGGAAGTCTTTGCATGCTCTGAGGTTCTTGAAAACCAGGATGGGAGGTTTACTTGTGCCAAGATGAGCCCTTAAGCAATGGCAACTCTCTCACTATGAACCAGAAGTTGTTTTCGATCTGAAAAATCACATAGCCAAATCCTCTTCTGTTTGAAATGCAGTTTGAAGATGGTGTCGATCACCGACAATGTACCTGTGCGTTGAGCCTTTAATGGTATTCCAACTGCAGCTGAGCTCCTTCTTCAAGTTCTTCTTAGCCATTTTCTTTCTCACGTGAGCTGCTTCTTCCCATTTCCCAAATGCAGTACACAAATTAAACATGGTTAGATGACTGATTGAGTGTCCCCTGGATTCAACTGAAGGAGGGTTTTCAGCTGCAGTCTTCCCGACGGTTCTTGTGTGATCCAGCAACCACCCAACAAGCATTTCCAGCTCATTTCATCGTCATTGATTGTCATACTCTTTATCAACGCAAGGCCATCATCTAGGACGCCACCACAAGAGTATACATCAATCATACAATCATAGCGAAGAATTCTAGATTCTGTGTACGGTACCAAGCCTGAATGGCTGCAAGAATAAAGGTAACAGCATTTGGCCGAACACTGAACGCCTGCATTTTAATAAAAAGCCTCAAAGATTCAGATGCATACCCATGATTTCCATAACCAAATATTACAGCAGTCCAAGCAGCAGTATCAAGGTTTGTCTAATGATTTGCAGGTTTGGAAGGCATAATCTAATCTGCCACATTTGGAGTACATTGTCTCACCATTGCACTCTCTCCAAATAGGTAAGGAAATCAGTCCCCTTTTATTGCATCGCCAGGAACTTGAGTTCCAAAATCGATACATGTAAGAGCAGAACAAGCTTGAAAAATGCAGGAATAGGTGTAAGAATTCAATGCCACACCTTTATTCCTGATAGTTTTAAATGTCTTTAAAGCATCACTGAAGTTACCAATCTGGCAACACTCCATGTAGAATCATTGGGCTCTTGTATTTTCTCAAAAGTTTTAAAAGCAGCTTCAAAACTTGCACATTTCACATAGAAATCCACCAGAGGAATTCCTAAAGAAACTGCACTGTCCAACCCAAATTCCTAAAGAAACTGCACTGTCCAACCCAACTTTAGTTCGGTAACCATGAATTTTCATCTCCAAATTCAAATCTTCTAAAGCAGCACATACCTTGAGGACAATCAAAAACACAAACGCGTCAAGTTCGACACCATCTCTGACCATTTTCCCAAAGAGTGATAGAACATCCTGCAGTTCGTTACTTCGTTGAAGAGTACCCTACCATCAATCCAGTCCAAGCCACCTTGTTTTTCTTTTCAGTCATCATATCAAAGACGAGCTCAGCTGCCTAACCAACCACATTTGACATACATGTTCATGACTGCAGTCTCAATCGAGGCATTTGAGCTCAGTCCATGTTTAAACACCTGAGAATGCATTTGATTGCCAAGGTCTAACATAGAAGGATCATCAAAGAAACTTAAGAGGCTTGTAAAAATGGATTGGTTGGATACAAATCCTTATGCCTGAATTGACGAGAAAGCCCAATCTGCGTATATGCAGATATCATTATAAACCATGACACCAAGTCTCTTTCGAGCATTTCATCGAACAGTCTTCGGGCATTTGACAAGCTACCACAATAACAATCATTTTTTAAAAGCACAACTCTGAAGGAAACCAGGTGGGTTGCGCACCGTCCTTTGCAGTAGATGGTGAACGAATTTACCATCTGGTAAAACCCTCAGATTCCCATACACTTGGAGAAGGCATTTGAACGTTTTGGCAGCAACAGAAACTCCCGCCCTATCCAGGTCTTCGAGAAATTCTCGAACTTCTTTGAGCTTCCGAAGAAATTAAATGCACACTTTCAAATTGGCTATCTTGAATATTTTCTCTGGAGAAAGGATGCGTTTCAAAGATATCCATGAAGGAATTTGAGTAAATTTTGCTGATTTCAAGGCCGGAATCCTATTATCACGAGCTGCCGCCGACGAAAGCTTGGTGGGTAGGAAACATTGCGAAGGAAGTATAGAATACAATCAATAATGGCCTCGAACTTGTTCCGAAATCTCACCAACTAAGAACCAAATTTGTCCACATATTGGTGGAGAAAACCACAAGGCAGTGTGATCAAATTTGTCTTTCCCTGTTATCAAGGTTACTCATGCACAGGCCACCTGCACCTTTCTGAACTACAAATTTGTTTCGGGGTTTTTGTGCTTACGAAAATCGGGAGAAAGTGAAAGACCGGAAATTTCATCTTATTCTCCTTCTTTTATGGATTTTGGGCCTTGAATTGTAAGGAGTGGACCGGCCCTAAATGATAGCATGGACCTTGCCATAATGCCTGGGTTGCTTTGCCAAAGTTTCAGAAGTTCGTTCTTTTCAGCCTCGGCCATGGCTTATTCCTGGGTTGATTTTCGGGGTCTTTTTCGCTTCAGTTTCTGTGCATTTGGCTGTTGTTCTGTTTGAGCAGGAATAGGATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTACTGCCCCATATCCCTCTCTCGCTTCTTCTTCATTTCGTTGAATTCATTCTAGTTTCCCTCAAAATTTTGCAGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGCATCTCTCTCCTTGTTTCTGTCTGTGTGTGTTGTGGTCATATTGAATAGAATGTTGCATATTTGCTGAAACTTAGAACCCTTTGGGCCTAACATCCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTCGGTGGTCATTCCATTCTTTATCCTAATTAAATGACGATCGTCCCTTCACTTGCTTTACTTGAACGTGTGAATTCTCTAATTCTGACTTCAGGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGTCTTCATATTTTCACATATTTTCTATCCTTCTAACTTCTATCCACTGGTACTCTGTGCATTACTATGTATTTTTGTAGGTTTTTATTCCCTTTTTCATTTCACCTTCTATTTGTAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCTAAGTGGGTTTGCATCTCTCAGAACTTCCCATGAATAAATTACTCTCCTAGATGACACCCTCTTCTTTGCTGCTTCTAACTTCAAAGATTTTTCGGTCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTTAGTTTAAGCTGACTGACTGCTCAACCCAAATTCAAAGCAGTTGACCCCATTTTTTGTTATTTGTGTATTGCATGGTAATTTCAGAAAATACAAATGATAAGTGGTGCAAAGTGATTGTGTTGTCTTCTTGATGGTGGTTAACTGATATGCCCTTTTGGCCACCTGTATTGAACTATTTCTGGTTTATGTTGAAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAATGGATTTCCTTGCAGCTTGAGTACTTCATCATTTGTAAGTCTGTAGGTTGACCATGATATATTAGTATTTGTTCATGAAGAACAATCTTCTGATATTAGTATCATTATCATATAAACTTGGTGTCTGTTCAACTTTTATGATGGGTGATTAATAGTTGCCTGTATAATCTTACTAATCAATCAAGTTTTTCCATTATCTCAATTTTGAAACAGCATGAAATTCTTTCAGCTTTCTCACTAAACGAGCAAGCAGTTTTGAGTATTGTTTATGGTAGATTATTGCCTTTCAGCTCCCTGTATTTATCTGAGAACAGATGGTCTTATGTTCTTTCAGAATATCTAACTCTGTTTTCTACTAATCATTTACAAGCACAAGGGAAAGTCAGCAGAAAAGAAAAGAAAACAAAACAACTGAAAGTTAACCCTGGGCTCAACCCTTGTTTACAAATCCTGGTTCCCGTTAAGATTTTATAGTAAACCCCTTTTTGATACTCTGGATCACAGAATTCACCACCCCAGATCATCACAAGCCTCCGCTGGAAAGACTCTGCAACAATCGTTAAATCTCAAGAATAATGTATCATATTGCCTATAGATGTTTAAAGTAGTGTTGCTTCACAAGAAATGAGTTGGTGCAAATGGGTTGTTTTGTTGAGATCTTACATCTTGGGACAGTCATACTGTCGATACTCTCTATCGACAGGCTCCGAAACACTGCGCCCCCTTCTTGGCCTCTGGTTTTAGCTTTACTTCCGGATACATTTCAACATCACAAGTTTCCCCTCCAATAGTGTCACAAGCCTCAGCTGGAAAAGCTCTGTAGAAACAGACACAGAAGAGCAGCAAACGAAAAGGGGTATTGAATCAGACATATTGTAGTCAACTGTTGAAGGGTCTTGTCCAACCGCACTTGCCTTTATTTGTAGGGTGGGACGTTGACGTTGAGTTTGAGAGGTGGGGTGCCTTCGTAGGGACCTCATAGGCATTGAGAAGGCCTTTGATTTGGTGGTTGGTGGGAAGAGAGAGCATGATGATGGAGATGCTAAGGAAAGTGGTGAAGAATGGATCAATCTGCTGCGAAGTTGATGCTTGGATACTTCTTGAGAGTAGGATTCAGACTTAAAAAAGGTTAAACAGATAAAAGATGGCAGATATCTCGCGACTGGATAAGGTTTTGGACCAATTATTTAGAGGAAAAAAGAACAAACTAGTGGTTGTGAAGGCTTGAATGGATGTATTATTCTTAGAATATTAGTATTGTCCCTTTATCTATCATTTTCTTTTTCATTTTTCTCATATCAAGAACATTCTTGAAGCGAATCCGTAGATATGTTTTTATTCGGTGGTTAATCTTTTTTGTTGAAGAGCTTAAATATCTGAGAATTTTGCGACTATTGGAGCATGAGTAGATCGTTTGCCATAATCGGACTGAGCCAACTGCTTCAAAAGCTCTGTAATTGGGTCAGCATCACAAGTAACTCATCGCTGCAGGGCCTGTCCTCGGGCAATTCTCGCGGCTCCACTGATTCCTCGAGCCACCGTCCTACACTCCCCCCACTGCCACTCCCATCCTCTCGGTTCGACAATGCCCGCTCCCTCGGATCTCTACCAGTTAACAAAACGCTCAGTATCACCCCAAAGCTGAAAATGTCGCTCTTGTCAGTATACCTATTCAAGATGAATGCCACCAAGCCATGGATTAAGCATGCAATTGTAATCAAGTTTCTTACCTAGAAAAGCAAAGGAGTATAATCATTAATGCAGAGAGAGAAAACGACATTGTAAAAAGTTCAGCTAACTTCAGTATCTTATCAACATCGTAAGCTTTAAATGAACTTTGACGGGTAATGCCTATTTGGGCAATCAATGTCTGTATACATCCAGGGGCATTTCTTTCATTTTCAAAGACCGCAACCGCAGAGGATTTTAGAGTACTGAAACCTTGGGGTTTGGGAGGATTTAGCCGGAGCTGTTAAGACACTCAGGAGCGGTGTACAAAGAAGCAGGTCTATCAAAATCAGGGAAGAGATTTGTTAACCCACAATCACCCAACTTTGGTTCAAACTCTGCGTCCAACAGCACATTTGCAGGGTTCAAATTGCAGTGAAGAATTCGAGGGTTACATTCAAAATGAAGAAACTGAAGCCCTCTGGCAAATCCCAACAGCAATTCGCAGCCGAACTTCCCATCTAAGTTCCAATTGATTCTCTCGCACTTTCCTCATTGCGTCCTCAAGAGACCCAAACAGCAGCTGCCCATTTCGTCGACGTAAGCCCTTAAGCTCATCATATTCCGATGCTTCAAACCCCCGAGCACCGCCATCTGCTGCTGCATTCGCCGCCGTTCCTCCGCGCTACCGCATTGAATGGGTTCGAGCTTCTTCACCGCCACTGTATGGCCATTGGCGAGAACAGCCCTGTAGCATTTCCCATTTGAGTTCGAACTCAAACCCAGCCAATGGGTTTCGCTCCGCAGCGCTGCCTGGAGAACATCGGCATCGATTTTTGGGGAAAAAATTAGGGGTCCTTCAAAGAAGTGGGGTTCGGTTTAGGTAACCCACAAGGCTGCGGATGAACCAAATAGAGAGAAAAACGCCAGCGAGTCCGGTGACGACCCCTTAGGCGACGCTGAGAAGAATCCTATGAAACCCATTCTTGAAATGGGAAGTTTTAGAGAATGGCACGAAATGCTCGCAAGAGCCAACAAGGGCATCGGAGCATAAACTTGGGTTCACCTTACAGAATCACCGCCATTAAATGTACAGAATTATGATGAGTACAGAATTATGATGAGTGTTAAACAGCAGAGTACAGAATTATGATGAGTGTTAAACAGCAGAGTACAGAATCCGAAGGACAAATTCAAATTTTGATTCCACATGTCGTTTGTGTCCCTACTAATACTACTAGTCTACTACCAATATACAATACTTTCTGTAGTTTTAATTAAAAAAATGATATTACGTGTGTCGGAATTATATTATATTGGATTTATTACGGAGTCAATA

mRNA sequence

AAAAAATTTGTAACCCTCCAAGAATACAAAAAAAATTTGTAACCCTCCAAGAATAAATAAACTTGATTCATTTTAATATGACATGAATGGTAACATCTTGTAATAATTTTTATAACATTTAATTTCATTGTAATATAACTCTAGTTTTCACGATTTGAATCTCCAACGACTATATCCTTACCTGTCTCAATGATACTTCCTTAGCAAACTCATGGAAGTCTTTGCATGCTCTGAGGTTCTTGAAAACCAGGATGGGAGGTTTACTTGTGCCAAGATGAGCCCTTAAGCAATGGCAACTCTCTCACTATGAACCAGAAGTTGTTTTCGATCTGAAAAATCACATAGCCAAATCCTCTTCTGTTTGAAATGCAGTTTGAAGATGGTGTCGATCACCGACAATGTACCTGTGCGTTGAGCCTTTAATGGTATTCCAACTGCAGCTGAGCTCCTTCTTCAAGTTCTTCTTAGCCATTTTCTTTCTCACGTGAGCTGCTTCTTCCCATTTCCCAAATGCAGTACACAAATTAAACATGGTTAGATGACTGATTGAGTGTCCCCTGGATTCAACTGAAGGAGGGTTTTCAGCTGCAGTCTTCCCGACGGTTCTTGTGTGATCCAGCAACCACCCAACAAGCATTTCCAGCTCATTTCATCGTCATTGATTGTCATACTCTTTATCAACGCAAGGCCATCATCTAGGACGCCACCACAAGAGTATACATCAATCATACAATCATAGCGAAGAATTCTAGATTCTGTGTACGGTACCAAGCCTGAATGGCTGCAAGAATAAAGGTAACAGCATTTGGCCGAACACTGAACGCCTGCATTTTAATAAAAAGCCTCAAAGATTCAGATGCATACCCATGATTTCCATAACCAAATATTACAGCAGTCCAAGCAGCAGTATCAAGGTTTGTCTAATGATTTGCAGGTTTGGAAGGCATAATCTAATCTGCCACATTTGGAGTACATTGTCTCACCATTGCACTCTCTCCAAATAGGTAAGGAAATCAGTCCCCTTTTATTGCATCGCCAGGAACTTGAGTTCCAAAATCGATACATGTAAGAGCAGAACAAGCTTGAAAAATGCAGGAATAGGTGTAAGAATTCAATGCCACACCTTTATTCCTGATAGTTTTAAATGTCTTTAAAGCATCACTGAAGTTACCAATCTGGCAACACTCCATGTAGAATCATTGGGCTCTTGTATTTTCTCAAAAGTTTTAAAAGCAGCTTCAAAACTTGCACATTTCACATAGAAATCCACCAGAGGAATTCCTAAAGAAACTGCACTGTCCAACCCAAATTCCTAAAGAAACTGCACTGTCCAACCCAACTTTAGTTCGGTAACCATGAATTTTCATCTCCAAATTCAAATCTTCTAAAGCAGCACATACCTTGAGGACAATCAAAAACACAAACGCGTCAAGTTCGACACCATCTCTGACCATTTTCCCAAAGAGTGATAGAACATCCTGCAGTTCGTTACTTCGTTGAAGAGTACCCTACCATCAATCCAGTCCAAGCCACCTTGTTTTTCTTTTCAGTCATCATATCAAAGACGAGCTCAGCTGCCTAACCAACCACATTTGACATACATGTTCATGACTGCAGTCTCAATCGAGGCATTTGAGCTCAGTCCATGTTTAAACACCTGAGAATGCATTTGATTGCCAAGGTCTAACATAGAAGGATCATCAAAGAAACTTAAGAGGCTTGTAAAAATGGATTGGTTGGATACAAATCCTTATGCCTGAATTGACGAGAAAGCCCAATCTGCGTATATGCAGATATCATTATAAACCATGACACCAAGTCTCTTTCGAGCATTTCATCGAACAGTCTTCGGGCATTTGACAAGCTACCACAATAACAATCATTTTTTAAAAGCACAACTCTGAAGGAAACCAGGTGGGTTGCGCACCGTCCTTTGCAGTAGATGGTGAACGAATTTACCATCTGGTAAAACCCTCAGATTCCCATACACTTGGAGAAGGCATTTGAACGTTTTGGCAGCAACAGAAACTCCCGCCCTATCCAGGTCTTCGAGAAATTCTCGAACTTCTTTGAGCTTCCGAAGAAATTAAATGCACACTTTCAAATTGGCTATCTTGAATATTTTCTCTGGAGAAAGGATGCGTTTCAAAGATATCCATGAAGGAATTTGAGTAAATTTTGCTGATTTCAAGGCCGGAATCCTATTATCACGAGCTGCCGCCGACGAAAGCTTGGTGGGTAGGAAACATTGCGAAGGAAGTATAGAATACAATCAATAATGGCCTCGAACTTGTTCCGAAATCTCACCAACTAAGAACCAAATTTGTCCACATATTGGTGGAGAAAACCACAAGGCAGTGTGATCAAATTTGTCTTTCCCTGTTATCAAGGTTACTCATGCACAGGCCACCTGCACCTTTCTGAACTACAAATTTGTTTCGGGGTTTTTGTGCTTACGAAAATCGGGAGAAAGTGAAAGACCGGAAATTTCATCTTATTCTCCTTCTTTTATGGATTTTGGGCCTTGAATTGTAAGGAGTGGACCGGCCCTAAATGATAGCATGGACCTTGCCATAATGCCTGGGTTGCTTTGCCAAAGTTTCAGAAGTTCGTTCTTTTCAGCCTCGGCCATGGCTTATTCCTGGGTTGATTTTCGGGGTCTTTTTCGCTTCAGTTTCTGTGCATTTGGCTGTTGTTCTGTTTGAGCAGGAATAGGATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCTAAGCCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAATGGATTTCCTTGCAGCTTGAGTACTTCATCATTTGTAAGTCTGTAGGTTGACCATGATATATTAGTATTTGTTCATGAAGAACAATCTTCTGATATTAGTATCATTATCATATAAACTTGGTGTCTGTTCAACTTTTATGATGGGTGATTAATAGTTGCCTGTATAATCTTACTAATCAATCAAGTTTTTCCATTATCTCAATTTTGAAACAGCATGAAATTCTTTCAGCTTTCTCACTAAACGAGCAAGCAGTTTTGAGTATTGTTTATGGTAGATTATTGCCTTTCAGCTCCCTGTATTTATCTGAGAACAGATGGTCTTATGTTCTTTCAGAATATCTAACTCTGTTTTCTACTAATCATTTACAAGCACAAGGGAAAGTCAGCAGAAAAGAAAAGAAAACAAAACAACTGAAAGTTAACCCTGGGCTCAACCCTTGTTTACAAATCCTGGTTCCCGTTAAGATTTTATAGTAAACCCCTTTTTGATACTCTGGATCACAGAATTCACCACCCCAGATCATCACAAGCCTCCGCTGGAAAGACTCTGCAACAATCGTTAAATCTCAAGAATAATGTATCATATTGCCTATAGATGTTTAAAGTAGTGTTGCTTCACAAGAAATGAGTTGGTGCAAATGGGTTGTTTTGTTGAGATCTTACATCTTGGGACAGTCATACTGTCGATACTCTCTATCGACAGGCTCCGAAACACTGCGCCCCCTTCTTGGCCTCTGGTTTTAGCTTTACTTCCGGATACATTTCAACATCACAAGTTTCCCCTCCAATAGTGTCACAAGCCTCAGCTGGAAAAGCTCTGTAGAAACAGACACAGAAGAGCAGCAAACGAAAAGGGGTATTGAATCAGACATATTGTAGTCAACTGTTGAAGGGTCTTGTCCAACCGCACTTGCCTTTATTTGTAGGGTGGGACGTTGACGTTGAGTTTGAGAGGTGGGGTGCCTTCGTAGGGACCTCATAGGCATTGAGAAGGCCTTTGATTTGGTGGTTGGTGGGAAGAGAGAGCATGATGATGGAGATGCTAAGGAAAGTGGTGAAGAATGGATCAATCTGCTGCGAAGTTGATGCTTGGATACTTCTTGAGAGTAGGATTCAGACTTAAAAAAGGTTAAACAGATAAAAGATGGCAGATATCTCGCGACTGGATAAGGTTTTGGACCAATTATTTAGAGGAAAAAAGAACAAACTAGTGGTTGTGAAGGCTTGAATGGATGTATTATTCTTAGAATATTAGTATTGTCCCTTTATCTATCATTTTCTTTTTCATTTTTCTCATATCAAGAACATTCTTGAAGCGAATCCGTAGATATGTTTTTATTCGGTGGTTAATCTTTTTTGTTGAAGAGCTTAAATATCTGAGAATTTTGCGACTATTGGAGCATGAGTAGATCGTTTGCCATAATCGGACTGAGCCAACTGCTTCAAAAGCTCTGTAATTGGGTCAGCATCACAAGTAACTCATCGCTGCAGGGCCTGTCCTCGGGCAATTCTCGCGGCTCCACTGATTCCTCGAGCCACCGTCCTACACTCCCCCCACTGCCACTCCCATCCTCTCGGTTCGACAATGCCCGCTCCCTCGGATCTCTACCAGTTAACAAAACGCTCAGTATCACCCCAAAGCTGAAAATGTCGCTCTTGTCAGTATACCTATTCAAGATGAATGCCACCAAGCCATGGATTAAGCATGCAATTGTAATCAAGTTTCTTACCTAGAAAAGCAAAGGAGTATAATCATTAATGCAGAGAGAGAAAACGACATTGTAAAAAGTTCAGCTAACTTCAGTATCTTATCAACATCGTAAGCTTTAAATGAACTTTGACGGGTAATGCCTATTTGGGCAATCAATGTCTGTATACATCCAGGGGCATTTCTTTCATTTTCAAAGACCGCAACCGCAGAGGATTTTAGAGTACTGAAACCTTGGGGTTTGGGAGGATTTAGCCGGAGCTGTTAAGACACTCAGGAGCGGTGTACAAAGAAGCAGGTCTATCAAAATCAGGGAAGAGATTTGTTAACCCACAATCACCCAACTTTGGTTCAAACTCTGCGTCCAACAGCACATTTGCAGGGTTCAAATTGCAGTGAAGAATTCGAGGGTTACATTCAAAATGAAGAAACTGAAGCCCTCTGGCAAATCCCAACAGCAATTCGCAGCCGAACTTCCCATCTAAGTTCCAATTGATTCTCTCGCACTTTCCTCATTGCGTCCTCAAGAGACCCAAACAGCAGCTGCCCATTTCGTCGACGTAAGCCCTTAAGCTCATCATATTCCGATGCTTCAAACCCCCGAGCACCGCCATCTGCTGCTGCATTCGCCGCCGTTCCTCCGCGCTACCGCATTGAATGGGTTCGAGCTTCTTCACCGCCACTGTATGGCCATTGGCGAGAACAGCCCTGTAGCATTTCCCATTTGAGTTCGAACTCAAACCCAGCCAATGGGTTTCGCTCCGCAGCGCTGCCTGGAGAACATCGGCATCGATTTTTGGGGAAAAAATTAGGGGTCCTTCAAAGAAGTGGGGTTCGGTTTAGGTAACCCACAAGGCTGCGGATGAACCAAATAGAGAGAAAAACGCCAGCGAGTCCGGTGACGACCCCTTAGGCGACGCTGAGAAGAATCCTATGAAACCCATTCTTGAAATGGGAAGTTTTAGAGAATGGCACGAAATGCTCGCAAGAGCCAACAAGGGCATCGGAGCATAAACTTGGGTTCACCTTACAGAATCACCGCCATTAAATGTACAGAATTATGATGAGTACAGAATTATGATGAGTGTTAAACAGCAGAGTACAGAATTATGATGAGTGTTAAACAGCAGAGTACAGAATCCGAAGGACAAATTCAAATTTTGATTCCACATGTCGTTTGTGTCCCTACTAATACTACTAGTCTACTACCAATATACAATACTTTCTGTAGTTTTAATTAAAAAAATGATATTACGTGTGTCGGAATTATATTATATTGGATTTATTACGGAGTCAATA

Coding sequence (CDS)

ATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCTAAGCCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAA

Protein sequence

MERFFSVRQIQTQCDSSHSIMLVSGPPSWYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAMSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSEDITE

Homology

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL
Match: E5GB61_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.6e-74
Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           YLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC
Sbjct: 82  YLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRTLALC 141

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
           HNA+SLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCGN
Sbjct: 142 HNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGN 201

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSEDITE 176
           DCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 202 DCCLRTKRAKYSIALQFLSLEEISEDSRE 230

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL
Match: A0A0A0K9H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.8e-73
Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           YLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC
Sbjct: 82  YLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 141

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
            NA+SLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCG 
Sbjct: 142 QNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGI 201

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSEDITE 176
           DCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 202 DCCLRTKRAKYSIALQFLSLEEISEDSRE 230

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL
Match: M5XZR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016591mg PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55
Identity = 105/145 (72.41%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           Y++DDEGI KYF+AFHLH T PVAVVIDDFGDFF+ER CQE+Y NPRGRDLAMVRTLALC
Sbjct: 92  YVDDDEGIKKYFAAFHLHETFPVAVVIDDFGDFFDERSCQERYGNPRGRDLAMVRTLALC 151

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
           HNAM  A    PC+L+LSDTHHG+SPRL+FIYKRWV TIFTI+GDGSG F+L+  +N G 
Sbjct: 152 HNAMVHANETSPCKLLLSDTHHGDSPRLLFIYKRWVTTIFTIQGDGSGSFVLKDNSNSG- 211

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSE 172
               RTK+AKYSI+LQ+L LEE++E
Sbjct: 212 ----RTKTAKYSISLQYLFLEEITE 231

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL
Match: A0A061E4V4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_008358 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.5e-52
Identity = 94/146 (64.38%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           Y +DD+GI KYF+AFHLH T P AV++DDFGDFF+ER CQE+Y NPRGRDLAMVRTLALC
Sbjct: 88  YADDDDGIKKYFAAFHLHDTFPAAVIVDDFGDFFQERSCQERYGNPRGRDLAMVRTLALC 147

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
            NA++ A    PC+L+LSDTHHG+SPRL+FIYKRW+P IFT++GDG+G F+L+     GN
Sbjct: 148 QNAITHACKKGPCKLLLSDTHHGDSPRLLFIYKRWIPAIFTVKGDGTGSFLLKYNKYSGN 207

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSED 173
                 + AKYSIA Q+L LEE++ED
Sbjct: 208 GSSKSERIAKYSIAFQYLFLEEITED 233

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL
Match: D7TYU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0244g00160 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.5e-52
Identity = 97/146 (66.44%), Postives = 121/146 (82.88%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           Y+EDDE I KYF+AFHLH   PVAV+IDDFGDFF+ER CQE+Y +PRGRDLAMVRTLALC
Sbjct: 88  YVEDDEAIKKYFAAFHLHHKFPVAVIIDDFGDFFDERTCQERYNSPRGRDLAMVRTLALC 147

Query: 90  HNAMSLAK---PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
            +A+  A    PC+++LSDTHHG+SPRL+FIYKRW+P+IFTI+GDGSG F+L +  N G+
Sbjct: 148 RSAILHANKTAPCKVLLSDTHHGDSPRLLFIYKRWIPSIFTIKGDGSGSFLLTNGINSGS 207

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSED 173
               R ++AKYSIALQ+L LE+V+ED
Sbjct: 208 GSSGRRRTAKYSIALQYLFLEDVTED 233

[Close]

BLAST of Cp4.1LG17g09450.1 vs. TAIR10
Match: AT3G23255.2 (AT3G23255.2 unknown protein)

HSP 1 Score: 164.5 bits (415), Expect = 6.0e-41
Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRT--LPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLA 89
           Y++DDEGI KYF+AFHLH    LP AV+IDDFGD+F +        N R RD+AMVRTLA
Sbjct: 87  YVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFGDYFSKLN---SVMNSRARDMAMVRTLA 146

Query: 90  LCHNAMSLAKP---CQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNC 149
           LCHNA+  A     C+LVLS+T+HG+SPR +FIYKRW+P IFTI+G G G F+L S    
Sbjct: 147 LCHNAIVDANRKALCELVLSETNHGDSPRSLFIYKRWIPKIFTIKGHGDGSFLLTS---- 206

Query: 150 GNDCCLRTKSAKYSIALQFLSLEEVSED 173
            ND   R  SAKYSIALQ+L LE++ +D
Sbjct: 207 -NDTSER--SAKYSIALQYLILEQIIDD 224

[Close]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr
Match: gi|659119908|ref|XP_008459907.1| (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-74
Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           YLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC
Sbjct: 82  YLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRTLALC 141

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
           HNA+SLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCGN
Sbjct: 142 HNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGN 201

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSEDITE 176
           DCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 202 DCCLRTKRAKYSIALQFLSLEEISEDSRE 230

[Close]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr
Match: gi|778711744|ref|XP_011656789.1| (PREDICTED: uncharacterized protein LOC101205665 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-73
Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           YLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC
Sbjct: 96  YLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 155

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
            NA+SLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCG 
Sbjct: 156 QNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGI 215

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSEDITE 176
           DCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 216 DCCLRTKRAKYSIALQFLSLEEISEDSRE 244

[Close]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr
Match: gi|700191211|gb|KGN46415.1| (hypothetical protein Csa_6G091880 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.5e-73
Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           YLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC
Sbjct: 82  YLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 141

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
            NA+SLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCG 
Sbjct: 142 QNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGI 201

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSEDITE 176
           DCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 202 DCCLRTKRAKYSIALQFLSLEEISEDSRE 230

[Close]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr
Match: gi|596290716|ref|XP_007226224.1| (hypothetical protein PRUPE_ppa016591mg [Prunus persica])

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 105/145 (72.41%), Postives = 123/145 (84.83%), Query Frame = 1


Query: 30  YLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC 89
           Y++DDEGI KYF+AFHLH T PVAVVIDDFGDFF+ER CQE+Y NPRGRDLAMVRTLALC
Sbjct: 92  YVDDDEGIKKYFAAFHLHETFPVAVVIDDFGDFFDERSCQERYGNPRGRDLAMVRTLALC 151

Query: 90  HNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGN 149
           HNAM  A    PC+L+LSDTHHG+SPRL+FIYKRWV TIFTI+GDGSG F+L+  +N G 
Sbjct: 152 HNAMVHANETSPCKLLLSDTHHGDSPRLLFIYKRWVTTIFTIQGDGSGSFVLKDNSNSG- 211

Query: 150 DCCLRTKSAKYSIALQFLSLEEVSE 172
               RTK+AKYSI+LQ+L LEE++E
Sbjct: 212 ----RTKTAKYSISLQYLFLEEITE 231

[Close]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr
Match: gi|1009155804|ref|XP_015895906.1| (PREDICTED: uncharacterized protein LOC107429689 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-54
Identity = 107/170 (62.94%), Postives = 130/170 (76.47%), Query Frame = 1


Query: 5   FSVRQIQTQCDSSHSIMLVSGPPSWYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFE 64
           F  + I T  D+ H I +       Y++DDEGI KYF+AFHLH T P AVVIDDFG+FF+
Sbjct: 73  FLSQGIDTSSDTFHRIEMK------YVDDDEGIKKYFAAFHLHDTFPAAVVIDDFGNFFD 132

Query: 65  ERRCQEKYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRW 124
           +R CQE+Y NPRGRDLAMVRTLALCHNA+  A    PC+L+LSDTHHG++PRL+FIYKRW
Sbjct: 133 DRSCQERYGNPRGRDLAMVRTLALCHNAIVHANETSPCKLLLSDTHHGDTPRLLFIYKRW 192

Query: 125 VPTIFTIRGDGSGWFILRSINNCGNDCCLRTKSAKYSIALQFLSLEEVSE 172
           VPTIFTIRGDGSG F L+S  N G++   R + AKYSIALQ+L LE ++E
Sbjct: 193 VPTIFTIRGDGSGSFYLKSNGNLGSEDSGRRRIAKYSIALQYLILEGITE 236

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09450.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g09450.1 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GB61_CUCME	1.6e-74	89.93	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0K9H1_CUCSA	1.8e-73	89.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091880 PE=4 SV=1	[more]
M5XZR9_PRUPE	1.3e-55	72.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016591mg PE=4 SV=1	[more]
A0A061E4V4_THECC	8.5e-52	64.38	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_008358 PE=4 SV=1	[more]
D7TYU3_VITVI	8.5e-52	66.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0244g00160 PE=4 SV=...	[more]

BLAST of Cp4.1LG17g09450.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23255.2	6.0e-41	58.11	unknown protein	[more]

BLAST of Cp4.1LG17g09450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119908\|ref\|XP_008459907.1\|	2.3e-74	89.93	PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo]	[more]
gi\|778711744\|ref\|XP_011656789.1\|	2.5e-73	89.93	PREDICTED: uncharacterized protein LOC101205665 [Cucumis sativus]	[more]
gi\|700191211\|gb\|KGN46415.1\|	2.5e-73	89.93	hypothetical protein Csa_6G091880 [Cucumis sativus]	[more]
gi\|596290716\|ref\|XP_007226224.1\|	1.8e-55	72.41	hypothetical protein PRUPE_ppa016591mg [Prunus persica]	[more]
gi\|1009155804\|ref\|XP_015895906.1\|	1.5e-54	62.94	PREDICTED: uncharacterized protein LOC107429689 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g09450	Cp4.1LG17g09450	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09450.1	Cp4.1LG17g09450.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09450.1:five_prime_utr:001	Cp4.1LG17g09450.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09450.1:cds:001	Cp4.1LG17g09450.1:cds:001	CDS
Cp4.1LG17g09450.1:cds:002	Cp4.1LG17g09450.1:cds:002	CDS
Cp4.1LG17g09450.1:cds:003	Cp4.1LG17g09450.1:cds:003	CDS
Cp4.1LG17g09450.1:cds:004	Cp4.1LG17g09450.1:cds:004	CDS
Cp4.1LG17g09450.1:cds:005	Cp4.1LG17g09450.1:cds:005	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g09450.1:three_prime_utr:001	Cp4.1LG17g09450.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12181	LIPIN	coord: 30..172 score: 3.6
None	No IPR available	PANTHER	PTHR12181:SF35	SUBFAMILY NOT NAMED	coord: 30..172 score: 3.6