Cp4.1LG17g08210.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g08210.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	TRANSPARENT TESTA 1 protein, putative
Location	Cp4.1LG17 : 5457674 .. 5459151 (-)
Sequence length	1046

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAAAGAAAAGAAAAGGAAAACCCTTGAAACCCTTGAAACCCTTACCATGACAGACCCTAATTACTCCAACTTCTTCTCTCCCAATTCCTTCACCTTCATCCCTCTCCCACCCTCTCCTCCGCCACTCTCTCCGCCGCAAGCCCTCCCTCTCATCAACACTCTCTCTCTGGAAACCACCGATCAACCTTCCTCCAGCACCACCAACAACCACGAAAACGCCCTCACCCTTGATTTCTGCCTCTCTTGCCCTACCTCCGATCTCGACCTCTCCGCCTCCTTCCCGCCGGACCCCACCGGAAAAACCCACCACGACGACCTCTCCCCCCTCCCTTCCCCGATCTCCGGCAAGGGTCAGTTCTGGATTCCAACCCCATCTCAGATCCTCTTCGGTCCTTCTCAGTTCTCCTGCCATCTTTGCTCTAAAGCCTTTAATCGATACAATAATCTTCAGGTAATTTATCATTTCATTAAAATAAACAAAAAAAAAAAAAAAAATGTTTTTTTTNAACATGTTTTTTTTTTTCTTTTGATCTATTTTATTCGAATTTGTAACAATTATTTGTGTTAGGGTTTTGATTTAACTGATCAAGAAATGTTCTTCATGTTCTTCATGTTCTTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGTTTGTTTGTTTACCTTTTCAGTCTGCGAAATTGAAGTGATCTTCTGCAAAAGAACTGTTTGAGCTGAGAATTAATTATGGGGAAAAGGGTTTCCATTAATTACTAAAACAAAAATTTCCATATTTTTTTTTTAATTTCTTGGGATTTAATTAAATATCAAATGGGTTTGTTTTAATTAATTAAAAAATAATTTATATTTTTATATGTAGATGCATATGTGGGGGCATGGTTCTCAATATAGGAAAGGACCAGAGTCCCTAAAAGGAACACAACCGACCGCCATGCTACGCTTGCCGTGCTACTGCTGCGCACCCGGGTGCAAACACAACATCGACAACCCGACGTCGCGACCGCTCAAGGACTTTCGCACGCTCCAGACACATTACAAACGTAAGCATGGAATCAAGCCTTTTAGTTGTAGAAAATGTAGCAAAGCGTTTGCTGTAAAAGGCGATTGGCGAACGCATGAGAAGAATTGTGGGAAGATTTGGTATTGTTTTTGTGGCTCTGACTTTAAACATAAACGCTCGCTTAAAGACCATATCAAGGCCTTTGGACAAGGTCATGGCTCGTTGGGTCTTGATTATTTTGATGACGATAACGAACCCGCATCCGAAGTTGAACAAGATGGCACCGTTGTTCATTAAGATGTTTCGTTCTTTGTTCTTGTTTGTTTGTTGAATAACACGTCGAGCGACCGAAGAGAGGTGTGATGTTCGATGTTATGTTGGAATTGTGTTATTTGTATATTATGAATTGAGTTGATGAGTTTGTAAAGAGGCTACGAGAAGTTGACAATTA

mRNA sequence

GGCAAAAGAAAAGAAAAGGAAAACCCTTGAAACCCTTGAAACCCTTACCATGACAGACCCTAATTACTCCAACTTCTTCTCTCCCAATTCCTTCACCTTCATCCCTCTCCCACCCTCTCCTCCGCCACTCTCTCCGCCGCAAGCCCTCCCTCTCATCAACACTCTCTCTCTGGAAACCACCGATCAACCTTCCTCCAGCACCACCAACAACCACGAAAACGCCCTCACCCTTGATTTCTGCCTCTCTTGCCCTACCTCCGATCTCGACCTCTCCGCCTCCTTCCCGCCGGACCCCACCGGAAAAACCCACCACGACGACCTCTCCCCCCTCCCTTCCCCGATCTCCGGCAAGGGTCAGTTCTGGATTCCAACCCCATCTCAGATCCTCTTCGGTCCTTCTCAGTTCTCCTGCCATCTTTGCTCTAAAGCCTTTAATCGATACAATAATCTTCAGATGCATATGTGGGGGCATGGTTCTCAATATAGGAAAGGACCAGAGTCCCTAAAAGGAACACAACCGACCGCCATGCTACGCTTGCCGTGCTACTGCTGCGCACCCGGGTGCAAACACAACATCGACAACCCGACGTCGCGACCGCTCAAGGACTTTCGCACGCTCCAGACACATTACAAACGTAAGCATGGAATCAAGCCTTTTAGTTGTAGAAAATGTAGCAAAGCGTTTGCTGTAAAAGGCGATTGGCGAACGCATGAGAAGAATTGTGGGAAGATTTGGTATTGTTTTTGTGGCTCTGACTTTAAACATAAACGCTCGCTTAAAGACCATATCAAGGCCTTTGGACAAGGTCATGGCTCGTTGGGTCTTGATTATTTTGATGACGATAACGAACCCGCATCCGAAGTTGAACAAGATGGCACCGTTGTTCATTAAGATGTTTCGTTCTTTGTTCTTGTTTGTTTGTTGAATAACACGTCGAGCGACCGAAGAGAGGTGTGATGTTCGATGTTATGTTGGAATTGTGTTATTTGTATATTATGAATTGAGTTGATGAGTTTGTAAAGAGGCTACGAGAAGTTGACAATTA

Coding sequence (CDS)

ATGACAGACCCTAATTACTCCAACTTCTTCTCTCCCAATTCCTTCACCTTCATCCCTCTCCCACCCTCTCCTCCGCCACTCTCTCCGCCGCAAGCCCTCCCTCTCATCAACACTCTCTCTCTGGAAACCACCGATCAACCTTCCTCCAGCACCACCAACAACCACGAAAACGCCCTCACCCTTGATTTCTGCCTCTCTTGCCCTACCTCCGATCTCGACCTCTCCGCCTCCTTCCCGCCGGACCCCACCGGAAAAACCCACCACGACGACCTCTCCCCCCTCCCTTCCCCGATCTCCGGCAAGGGTCAGTTCTGGATTCCAACCCCATCTCAGATCCTCTTCGGTCCTTCTCAGTTCTCCTGCCATCTTTGCTCTAAAGCCTTTAATCGATACAATAATCTTCAGATGCATATGTGGGGGCATGGTTCTCAATATAGGAAAGGACCAGAGTCCCTAAAAGGAACACAACCGACCGCCATGCTACGCTTGCCGTGCTACTGCTGCGCACCCGGGTGCAAACACAACATCGACAACCCGACGTCGCGACCGCTCAAGGACTTTCGCACGCTCCAGACACATTACAAACGTAAGCATGGAATCAAGCCTTTTAGTTGTAGAAAATGTAGCAAAGCGTTTGCTGTAAAAGGCGATTGGCGAACGCATGAGAAGAATTGTGGGAAGATTTGGTATTGTTTTTGTGGCTCTGACTTTAAACATAAACGCTCGCTTAAAGACCATATCAAGGCCTTTGGACAAGGTCATGGCTCGTTGGGTCTTGATTATTTTGATGACGATAACGAACCCGCATCCGAAGTTGAACAAGATGGCACCGTTGTTCATTAA

Protein sequence

MTDPNYSNFFSPNSFTFIPLPPSPPPLSPPQALPLINTLSLETTDQPSSSTTNNHENALTLDFCLSCPTSDLDLSASFPPDPTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQDGTVVH

Homology

[Close]

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.7e-92
Identity = 162/254 (63.78%), Postives = 189/254 (74.41%), Query Frame = 1


Query: 27  LSPPQALPLINTLSLETTDQPSSSTTNNHENALTLDFCLSCPTSDLDLSASFPPDPTGKT 86
           L  P A  + + L + ++   SS TT++HE+               DL   +     G  
Sbjct: 130 LPSPSAQEMASLLMMSSSSS-SSRTTHHHEDM----------NHKKDLDHEYSHGAVGGG 189

Query: 87  HHDDLSPLPSP----IS--GKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWG 146
             DD   +       IS   KGQ+WIPTPSQIL GP+QFSC +C K FNRYNN+QMHMWG
Sbjct: 190 EDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWG 249

Query: 147 HGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGI 206
           HGSQYRKGPESL+GTQPT MLRLPCYCCAPGC++NID+P ++PLKDFRTLQTHYKRKHGI
Sbjct: 250 HGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGI 309

Query: 207 KPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLD 266
           KPF CRKC KAFAV+GDWRTHEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHG+ G+D
Sbjct: 310 KPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID 369

Query: 267 YFDDDNEPASEVEQ 275
            FD+++EPASEVEQ
Sbjct: 370 GFDEEDEPASEVEQ 372

[Close]

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.2e-86
Identity = 138/172 (80.23%), Postives = 156/172 (90.70%), Query Frame = 1


Query: 104 FWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 163
           FWIPTPSQIL GP+QFSC LC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTAML+L
Sbjct: 241 FWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKL 300

Query: 164 PCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEK 223
           PCYCCAPGCK+NID+P +RPLKDFRTLQTHYKRKHG++PF+CR+C KAFAVKGDWRTHEK
Sbjct: 301 PCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360

Query: 224 NCGKIWYCFCGSDFKHKRSLKDHIKAFGQGH-GSLGLDYFDDDNEPASEVEQ 275
           NCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E AS+VEQ
Sbjct: 361 NCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQ 410

[Close]

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-86
Identity = 163/304 (53.62%), Postives = 199/304 (65.46%), Query Frame = 1


Query: 2   TDPNYSNFFSPNSFTFIPLPPSPPPLSPPQALPLINTLSLETTDQPS----------SST 61
           T+PNY N     S +     P+ PPL   +ALPL++   +   +Q            SS+
Sbjct: 41  TNPNYINHTHTTSTS-----PNSPPLR--EALPLLSLSPIRHQEQQDQHYFMDTHQISSS 100

Query: 62  TNNHENALTLDFCLSCPTSDL--DLSASFPPDPTG---------------KTHHDDLSPL 121
               +  +T+D  L  P   +   + ++  PD T                ++H DD    
Sbjct: 101 NFLDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDH 160

Query: 122 PSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKG 181
              +     +WIPTPSQIL GP+QF+C LC K FNRYNN+QMHMWGHGSQYRKGPESL+G
Sbjct: 161 HGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRG 220

Query: 182 TQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAV 241
           TQPT MLRLPC+CCAPGCK+NID+P ++PLKDFRTLQTHYKRKHG KPF+CR C KAFAV
Sbjct: 221 TQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAV 280

Query: 242 KGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNE----PAS 275
           KGDWRTHEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH   G+D F  D+E     AS
Sbjct: 281 KGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAAS 337

[Close]

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 9.3e-78
Identity = 146/263 (55.51%), Postives = 185/263 (70.34%), Query Frame = 1


Query: 27  LSPP-QALPLINTLSLETTDQPSSSTTNNHE----NALTLDFCLSCPTSDLDLSASFPPD 86
           L PP Q  P  N     T+ +PSS    NH     N +T+   +  P+SD +  +     
Sbjct: 20  LGPPGQQYPSHNK---PTSTKPSSDHEFNHPLTNPNGVTVALHIGPPSSDKETLS----- 79

Query: 87  PTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGH 146
             G  + + L+      + +GQ+WIP+ SQIL GP+QFSC +C+K FNR+NN+QMHMWGH
Sbjct: 80  --GGNNQEGLT------ARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGH 139

Query: 147 GSQYRKGPESLKGTQ-PTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGI 206
           GSQYRKGPESL+GT+  +++LRLPCYCCA GCK+NID+P S+PLKDFRTLQTHYKRKHG 
Sbjct: 140 GSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGA 199

Query: 207 KPFSCR-KCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGS--- 266
           KPF CR KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH +   
Sbjct: 200 KPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 259

Query: 267 ----LGLDYFDDDNEPASEVEQD 276
               +G+   D+D+E   E E+D
Sbjct: 260 SDRVVGIGDADEDDEEEEEEEED 266

[Close]

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.5e-77
Identity = 127/180 (70.56%), Postives = 143/180 (79.44%), Query Frame = 1


Query: 94  LPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLK 153
           + + +SGK  +WIP P QIL G + FSCH+C K FNRYNNLQMHMWGHGSQYRKGPESLK
Sbjct: 121 IENELSGKA-YWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLK 180

Query: 154 GTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFA 213
           GTQP AML +PCYCC  GC+++ID+P S+PLKDFRTLQTHYKRKHG KPFSCR C K  A
Sbjct: 181 GTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLA 240

Query: 214 VKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVE 273
           VKGDWRTHEKNCGK W C CGSDFKHKRSLKDH+KAFG GHG      F++    +S  E
Sbjct: 241 VKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQASNSSVSE 299

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL
Match: A0A0A0K6L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428260 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.2e-126
Identity = 226/293 (77.13%), Postives = 242/293 (82.59%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPLPPS-------------PPPLSPPQALPLINTLSLETTDQP 60
           MTDPNYS+    NSF FI LPPS             PPP SPPQALPL+NTLS ET D P
Sbjct: 1   MTDPNYSS----NSFNFIHLPPSNFLLSQCRRPTPPPPPSSPPQALPLLNTLSPETADHP 60

Query: 61  SSSTT----NNHENALTLDFCLSCPTSDLDLSASFPPDP-TGKTHHDDLSPLPSPISGKG 120
           SSSTT    ++    L LD  LSCP+SDLD   SF PDP TGK    D+S  P PISGKG
Sbjct: 61  SSSTTTRSYDDESAVLALDISLSCPSSDLD---SFSPDPGTGKIIDGDVSDHPLPISGKG 120

Query: 121 QFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR 180
           Q+WIPTPSQIL GP+QFSC LCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR
Sbjct: 121 QYWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR 180

Query: 181 LPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHE 240
           LPCYCCA GCKHNIDNP SRPLKDFRTLQTHYKRKHGIKPF+CRKC+KAFAVKGDWRTHE
Sbjct: 181 LPCYCCAVGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHE 240

Query: 241 KNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQD 276
           KNCGKIWYCFCGSDFKHKRSLKDHIKAFG+GHG+LGLDYFDDDNEP+ E+++D
Sbjct: 241 KNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL
Match: A0A0D2P7V8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G065400 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 185/334 (55.39%), Postives = 209/334 (62.57%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPL------------PPSPPP---------------------- 60
           MTDP YSN F    F F+PL            PP PPP                      
Sbjct: 1   MTDP-YSNLFPGGGFNFVPLNPHYATRFSTTAPPPPPPHPTHSSQPHTNNNIIFNTYSSI 60

Query: 61  ---------LSPPQALPLINTLS--LETTDQPSSS----------------TTNNHENAL 120
                      P QALPLIN LS   +  ++PSSS                  +     +
Sbjct: 61  EAQTPHPWPAPPQQALPLINYLSPTRQEENEPSSSFMEGDKGMNKEAAAAAAADEEAETV 120

Query: 121 TLDFCLSCPTSDLDLSASFPPDPTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQF 180
           TL   L  P SDL      P          + S +P     KGQ+WIPTP+QIL GP+QF
Sbjct: 121 TLHIGLPIPISDLGFGGLSPSAHVTDRLGGNGSAVPGYPLTKGQYWIPTPTQILVGPTQF 180

Query: 181 SCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNP 240
           SCH+C K FNRYNNLQMHMWGHGSQYRKGP+SL+G+QPTAMLRLPCYCCAPGCKHNI++P
Sbjct: 181 SCHVCCKTFNRYNNLQMHMWGHGSQYRKGPDSLRGSQPTAMLRLPCYCCAPGCKHNIEHP 240

Query: 241 TSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKH 274
            +RPLKDFRTLQTHYKRKHG+KPF+CRKC KAFAVKGDWRTHEKNCGKIWYC CGSDFKH
Sbjct: 241 RARPLKDFRTLQTHYKRKHGVKPFTCRKCDKAFAVKGDWRTHEKNCGKIWYCICGSDFKH 300

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL
Match: A0A0D2SFC2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G177300 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.6e-95
Identity = 189/321 (58.88%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPLPP----SPPPL--------------------------SPP 60
           MTDP YSN FS   F F+PL P    +P PL                          SPP
Sbjct: 1   MTDP-YSNLFS-GCFNFMPLHPHYATAPTPLNHPNPCSHLHPNSILNSETSGHPLAPSPP 60

Query: 61  --QALPLINTLS---LETTDQPSSS--------TTNNHENALTLDFCLSCPTSDLDLSAS 120
             +ALPLIN LS    +  ++P+SS        T ++   ++ L   L   +SD   S S
Sbjct: 61  GEEALPLINYLSPTRQQENNEPTSSSMEDDKLSTVDDEAASVALHIGLPSHSSDYGFSPS 120

Query: 121 FP-PDPTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQM 180
               D  G   +   S  P   S KGQ+WIPTP+QIL GP+QFSC +C K FNRYNNLQM
Sbjct: 121 VDLTDNCGVNGNVAASGYPLSCSSKGQYWIPTPTQILVGPTQFSCPVCCKTFNRYNNLQM 180

Query: 181 HMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKR 240
           HMWGHGSQYRKGP+SL+G+QPT MLRLPCYCCAPGCKHNID+P +R LKDFRTLQTHYKR
Sbjct: 181 HMWGHGSQYRKGPDSLRGSQPTGMLRLPCYCCAPGCKHNIDHPRARALKDFRTLQTHYKR 240

Query: 241 KHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGS 278
           KHGIKPF+CRKC KAFAVKGDWRTHEKNCGKIWYC CGSDFKHKRSLKDHIKAFG GHGS
Sbjct: 241 KHGIKPFNCRKCEKAFAVKGDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKAFGAGHGS 300

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL
Match: A0A061DVJ5_THECC (TRANSPARENT TESTA 1 protein, putative OS=Theobroma cacao GN=TCM_005892 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-94
Identity = 190/333 (57.06%), Postives = 218/333 (65.47%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPLPP--------------------------------SPPPLS 60
           MTDP  SNFF+     F+PL P                                S  P S
Sbjct: 1   MTDPACSNFFN-GCLNFMPLNPHYTSFTTPNHPNPSSQAHTSNIIINKSSIQGQSTYPSS 60

Query: 61  PP--QALPLINTLSL--ETTDQPSSSTTNNHEN---------------ALTLDFCLSCPT 120
           PP  +ALPLIN LS   +  ++PSSS+    +N               A+T+   +  P+
Sbjct: 61  PPRKEALPLINYLSPTGQEENEPSSSSVEEDKNMSKEESLFSSTVDDEAVTVALHIGLPS 120

Query: 121 ---SDLDLSASFPPDPTGKTHHDDLSPLPSPISG----KGQFWIPTPSQILFGPSQFSCH 180
              SDL    S   D T K  +       S +SG    KGQ+WIPTP+QIL GP+QFSC 
Sbjct: 121 PSNSDLRFRVSPSADVTDKGENG------SAVSGYPLSKGQYWIPTPTQILVGPTQFSCP 180

Query: 181 LCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNPTSR 240
           +C K FNRYNNLQMHMWGHGSQYRKGP+SL+G+QPTAMLRLPCYCCAPGCKHNID+P +R
Sbjct: 181 VCGKTFNRYNNLQMHMWGHGSQYRKGPDSLRGSQPTAMLRLPCYCCAPGCKHNIDHPRAR 240

Query: 241 PLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRS 276
           PLKDFRTLQTHYKRKHGIKPF CRKC KAFAVKGDWRTHEKNCGKIWYC CGSDFKHKRS
Sbjct: 241 PLKDFRTLQTHYKRKHGIKPFMCRKCEKAFAVKGDWRTHEKNCGKIWYCICGSDFKHKRS 300

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL
Match: K7LWM6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G237800 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.9e-94
Identity = 180/302 (59.60%), Postives = 212/302 (70.20%), Query Frame = 1


Query: 11  SPNSFTFIPLPPSPPPLSPPQALPLINTLSLETTDQ-----PSSSTT------------N 70
           S +S +F   PPS PPL   +ALPLIN +SL++++Q     PSS+              N
Sbjct: 51  SSSSSSFYAAPPSSPPLR--EALPLINKISLKSSEQHQQNEPSSNVVEEKEEDKNKVDNN 110

Query: 71  NH--------ENALTLDFCLSCPTSDLDLSASFPPDPTGKTHHDDLS-----------PL 130
            H        E  +T+   +  P  D   S+   P     T   ++S           PL
Sbjct: 111 KHHESGEDGDEETVTVALHIGLPRMDTS-SSDLGPSRVVSTTCMEISEKEEVNMISKHPL 170

Query: 131 PSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKG 190
            + ++ KGQ+WIPTPSQIL GP+QF C +CSK FNRYNNLQMHMWGHGSQYRKGP+SLKG
Sbjct: 171 DNRLN-KGQYWIPTPSQILIGPTQFPCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKG 230

Query: 191 TQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAV 250
           TQPTAMLRLPC+CCAPGCKHNID+P +RPLKDFRTLQTHYKRKHGIKP+ CRKC KAFAV
Sbjct: 231 TQPTAMLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAV 290

Query: 251 KGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQ 277
           KGDWRTHEKNCGKIWYC CGSDFKHKRSLKDHIKAFG GHGS G+D   +++E AS++E 
Sbjct: 291 KGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGFGHGSFGIDCLQEEDEAASDIEH 348

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10
Match: AT3G57670.1 (AT3G57670.1 C2H2-type zinc finger family protein)

HSP 1 Score: 340.5 bits (872), Expect = 9.8e-94
Identity = 162/254 (63.78%), Postives = 189/254 (74.41%), Query Frame = 1


Query: 27  LSPPQALPLINTLSLETTDQPSSSTTNNHENALTLDFCLSCPTSDLDLSASFPPDPTGKT 86
           L  P A  + + L + ++   SS TT++HE+               DL   +     G  
Sbjct: 130 LPSPSAQEMASLLMMSSSSS-SSRTTHHHEDM----------NHKKDLDHEYSHGAVGGG 189

Query: 87  HHDDLSPLPSP----IS--GKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWG 146
             DD   +       IS   KGQ+WIPTPSQIL GP+QFSC +C K FNRYNN+QMHMWG
Sbjct: 190 EDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWG 249

Query: 147 HGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGI 206
           HGSQYRKGPESL+GTQPT MLRLPCYCCAPGC++NID+P ++PLKDFRTLQTHYKRKHGI
Sbjct: 250 HGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGI 309

Query: 207 KPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLD 266
           KPF CRKC KAFAV+GDWRTHEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHG+ G+D
Sbjct: 310 KPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID 369

Query: 267 YFDDDNEPASEVEQ 275
            FD+++EPASEVEQ
Sbjct: 370 GFDEEDEPASEVEQ 372

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10
Match: AT3G20880.1 (AT3G20880.1 WIP domain protein 4)

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-87
Identity = 138/172 (80.23%), Postives = 156/172 (90.70%), Query Frame = 1


Query: 104 FWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 163
           FWIPTPSQIL GP+QFSC LC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTAML+L
Sbjct: 241 FWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKL 300

Query: 164 PCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEK 223
           PCYCCAPGCK+NID+P +RPLKDFRTLQTHYKRKHG++PF+CR+C KAFAVKGDWRTHEK
Sbjct: 301 PCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360

Query: 224 NCGKIWYCFCGSDFKHKRSLKDHIKAFGQGH-GSLGLDYFDDDNEPASEVEQ 275
           NCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E AS+VEQ
Sbjct: 361 NCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQ 410

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10
Match: AT1G51220.1 (AT1G51220.1 WIP domain protein 5)

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-87
Identity = 163/304 (53.62%), Postives = 199/304 (65.46%), Query Frame = 1


Query: 2   TDPNYSNFFSPNSFTFIPLPPSPPPLSPPQALPLINTLSLETTDQPS----------SST 61
           T+PNY N     S +     P+ PPL   +ALPL++   +   +Q            SS+
Sbjct: 41  TNPNYINHTHTTSTS-----PNSPPLR--EALPLLSLSPIRHQEQQDQHYFMDTHQISSS 100

Query: 62  TNNHENALTLDFCLSCPTSDL--DLSASFPPDPTG---------------KTHHDDLSPL 121
               +  +T+D  L  P   +   + ++  PD T                ++H DD    
Sbjct: 101 NFLDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDH 160

Query: 122 PSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKG 181
              +     +WIPTPSQIL GP+QF+C LC K FNRYNN+QMHMWGHGSQYRKGPESL+G
Sbjct: 161 HGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRG 220

Query: 182 TQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAV 241
           TQPT MLRLPC+CCAPGCK+NID+P ++PLKDFRTLQTHYKRKHG KPF+CR C KAFAV
Sbjct: 221 TQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAV 280

Query: 242 KGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNE----PAS 275
           KGDWRTHEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH   G+D F  D+E     AS
Sbjct: 281 KGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAAS 337

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10
Match: AT1G13290.1 (AT1G13290.1 C2H2-like zinc finger protein)

HSP 1 Score: 291.6 bits (745), Expect = 5.2e-79
Identity = 146/263 (55.51%), Postives = 185/263 (70.34%), Query Frame = 1


Query: 27  LSPP-QALPLINTLSLETTDQPSSSTTNNHE----NALTLDFCLSCPTSDLDLSASFPPD 86
           L PP Q  P  N     T+ +PSS    NH     N +T+   +  P+SD +  +     
Sbjct: 20  LGPPGQQYPSHNK---PTSTKPSSDHEFNHPLTNPNGVTVALHIGPPSSDKETLS----- 79

Query: 87  PTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGH 146
             G  + + L+      + +GQ+WIP+ SQIL GP+QFSC +C+K FNR+NN+QMHMWGH
Sbjct: 80  --GGNNQEGLT------ARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGH 139

Query: 147 GSQYRKGPESLKGTQ-PTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGI 206
           GSQYRKGPESL+GT+  +++LRLPCYCCA GCK+NID+P S+PLKDFRTLQTHYKRKHG 
Sbjct: 140 GSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGA 199

Query: 207 KPFSCR-KCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGS--- 266
           KPF CR KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH +   
Sbjct: 200 KPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 259

Query: 267 ----LGLDYFDDDNEPASEVEQD 276
               +G+   D+D+E   E E+D
Sbjct: 260 SDRVVGIGDADEDDEEEEEEEED 266

[Close]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10
Match: AT1G34790.1 (AT1G34790.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-78
Identity = 127/180 (70.56%), Postives = 143/180 (79.44%), Query Frame = 1


Query: 94  LPSPISGKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLK 153
           + + +SGK  +WIP P QIL G + FSCH+C K FNRYNNLQMHMWGHGSQYRKGPESLK
Sbjct: 121 IENELSGKA-YWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLK 180

Query: 154 GTQPTAMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFA 213
           GTQP AML +PCYCC  GC+++ID+P S+PLKDFRTLQTHYKRKHG KPFSCR C K  A
Sbjct: 181 GTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLA 240

Query: 214 VKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVE 273
           VKGDWRTHEKNCGK W C CGSDFKHKRSLKDH+KAFG GHG      F++    +S  E
Sbjct: 241 VKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQASNSSVSE 299

[Close]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr
Match: gi|449436669|ref|XP_004136115.1| (PREDICTED: zinc finger protein WIP2-like [Cucumis sativus])

HSP 1 Score: 459.9 bits (1182), Expect = 3.1e-126
Identity = 226/293 (77.13%), Postives = 242/293 (82.59%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPLPPS-------------PPPLSPPQALPLINTLSLETTDQP 60
           MTDPNYS+    NSF FI LPPS             PPP SPPQALPL+NTLS ET D P
Sbjct: 1   MTDPNYSS----NSFNFIHLPPSNFLLSQCRRPTPPPPPSSPPQALPLLNTLSPETADHP 60

Query: 61  SSSTT----NNHENALTLDFCLSCPTSDLDLSASFPPDP-TGKTHHDDLSPLPSPISGKG 120
           SSSTT    ++    L LD  LSCP+SDLD   SF PDP TGK    D+S  P PISGKG
Sbjct: 61  SSSTTTRSYDDESAVLALDISLSCPSSDLD---SFSPDPGTGKIIDGDVSDHPLPISGKG 120

Query: 121 QFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR 180
           Q+WIPTPSQIL GP+QFSC LCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR
Sbjct: 121 QYWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLR 180

Query: 181 LPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHE 240
           LPCYCCA GCKHNIDNP SRPLKDFRTLQTHYKRKHGIKPF+CRKC+KAFAVKGDWRTHE
Sbjct: 181 LPCYCCAVGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHE 240

Query: 241 KNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQD 276
           KNCGKIWYCFCGSDFKHKRSLKDHIKAFG+GHG+LGLDYFDDDNEP+ E+++D
Sbjct: 241 KNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr
Match: gi|659122702|ref|XP_008461280.1| (PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo])

HSP 1 Score: 453.4 bits (1165), Expect = 2.9e-124
Identity = 221/289 (76.47%), Postives = 241/289 (83.39%), Query Frame = 1


Query: 1   MTDPNYSNFFS-----PNSFTFI----PLPPSPPPLSPPQALPLINTLSLETTDQPSSST 60
           MTDPNYSN F+     P++F       PLPP  PP SPPQALPL+NTLS ET D PSSST
Sbjct: 1   MTDPNYSNSFNFIHLPPSNFLLSQCRRPLPPPSPPSSPPQALPLLNTLSPETADHPSSST 60

Query: 61  T----NNHENALTLDFCLSCPTSDLDLSASFPPDPTGKTHHD-DLSPLPSPISGKGQFWI 120
           T    ++    L LD  LSCP+SDLD   SF PDP  +   D ++S  P PISGKGQ+WI
Sbjct: 61  TTCSYDDESAVLALDIGLSCPSSDLD---SFSPDPGNRKIIDGEISDHPLPISGKGQYWI 120

Query: 121 PTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCY 180
           PTPSQIL GP+QFSC LCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCY
Sbjct: 121 PTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCY 180

Query: 181 CCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCG 240
           CCA GCKHNIDNP SRPLKDFRTLQTHYKRKHGIKPF+CRKC+KAFAVKGDWRTHEKNCG
Sbjct: 181 CCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCG 240

Query: 241 KIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQD 276
           KIWYCFCGSDFKHKRSLKDHIKAFG+GHG+LGLDYFDDDNEP+ E+++D
Sbjct: 241 KIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr
Match: gi|823147539|ref|XP_012473683.1| (PREDICTED: zinc finger protein WIP2-like [Gossypium raimondii])

HSP 1 Score: 357.5 bits (916), Expect = 2.2e-95
Identity = 185/334 (55.39%), Postives = 209/334 (62.57%), Query Frame = 1


Query: 1   MTDPNYSNFFSPNSFTFIPL------------PPSPPP---------------------- 60
           MTDP YSN F    F F+PL            PP PPP                      
Sbjct: 1   MTDP-YSNLFPGGGFNFVPLNPHYATRFSTTAPPPPPPHPTHSSQPHTNNNIIFNTYSSI 60

Query: 61  ---------LSPPQALPLINTLS--LETTDQPSSS----------------TTNNHENAL 120
                      P QALPLIN LS   +  ++PSSS                  +     +
Sbjct: 61  EAQTPHPWPAPPQQALPLINYLSPTRQEENEPSSSFMEGDKGMNKEAAAAAAADEEAETV 120

Query: 121 TLDFCLSCPTSDLDLSASFPPDPTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQF 180
           TL   L  P SDL      P          + S +P     KGQ+WIPTP+QIL GP+QF
Sbjct: 121 TLHIGLPIPISDLGFGGLSPSAHVTDRLGGNGSAVPGYPLTKGQYWIPTPTQILVGPTQF 180

Query: 181 SCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNP 240
           SCH+C K FNRYNNLQMHMWGHGSQYRKGP+SL+G+QPTAMLRLPCYCCAPGCKHNI++P
Sbjct: 181 SCHVCCKTFNRYNNLQMHMWGHGSQYRKGPDSLRGSQPTAMLRLPCYCCAPGCKHNIEHP 240

Query: 241 TSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKH 274
            +RPLKDFRTLQTHYKRKHG+KPF+CRKC KAFAVKGDWRTHEKNCGKIWYC CGSDFKH
Sbjct: 241 RARPLKDFRTLQTHYKRKHGVKPFTCRKCDKAFAVKGDWRTHEKNCGKIWYCICGSDFKH 300

[Close]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr
Match: gi|672143636|ref|XP_008795700.1| (PREDICTED: protein TRANSPARENT TESTA 1-like [Phoenix dactylifera])

HSP 1 Score: 356.3 bits (913), Expect = 4.9e-95
Identity = 180/298 (60.40%), Postives = 216/298 (72.48%), Query Frame = 1


Query: 4   PNYSNFFSPNSF-TFIPLPPSPPPLSPP--QALPLIN---TLSLETTDQPSSSTTNN--- 63
           P Y+NF++ +S     P  P+PPP SPP  +ALPL+    T   E  D   S   N    
Sbjct: 30  PAYNNFYNTHSCGNHNPHLPTPPP-SPPLREALPLLRLSPTRPPEEEDTSCSEAKNKAMS 89

Query: 64  --------HENALTLDFCLSCPT---SDLDLSASFPPDPTGKTHH---DDLSPLPSPIS- 123
                    + A+T+   +  P    +DL  + S  P+ +G       D+++PL  PI  
Sbjct: 90  INDEADDGDDQAVTVALRIGLPNPGAADLISTISSAPEDSGDKEAEGGDEVAPLCYPIGR 149

Query: 124 -GKGQFWIPTPSQILFGPSQFSCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPT 183
             KGQ+WIPTPSQIL GP+QFSC +C K FNRYNN+QMHMWGHGSQYRKGPESL+G QPT
Sbjct: 150 LNKGQYWIPTPSQILIGPTQFSCPVCLKTFNRYNNMQMHMWGHGSQYRKGPESLRGIQPT 209

Query: 184 AMLRLPCYCCAPGCKHNIDNPTSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDW 243
           AMLRLPCYCCAPGC++NID+P S+PLKDFRTLQTHYKRKHGIKPF CRKC KAFAV+GDW
Sbjct: 210 AMLRLPCYCCAPGCRNNIDHPRSKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDW 269

Query: 244 RTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQDG 277
           RTHEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GH + G+D F++D+EP+SE+EQDG
Sbjct: 270 RTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAYGIDCFEEDDEPSSEIEQDG 326

[Close]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr
Match: gi|297739699|emb|CBI29881.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 355.9 bits (912), Expect = 6.4e-95
Identity = 171/276 (61.96%), Postives = 207/276 (75.00%), Query Frame = 1


Query: 6   YSNFFSPNSFTFI-PLPPSPPPLSPPQALPLINTLSL--ETTDQPSSSTTNNHENALTLD 65
           Y+N FS +S + I   PP  PPL   +ALPL++      E   Q   S+ +N +  +T+ 
Sbjct: 37  YTNSFSSHSNSIIYQTPPPSPPLR--EALPLLSLSPTRHEEDQQQQHSSCSNDDETVTVA 96

Query: 66  FCLSCPT---SDLDLSASFPPDPTGKTHHDDLSPLPSPISGKGQFWIPTPSQILFGPSQF 125
             +  P+   +++    S   + T K    D+S  P     KGQ+WIPTPSQIL GP+QF
Sbjct: 97  LHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLNKGQYWIPTPSQILIGPTQF 156

Query: 126 SCHLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPCYCCAPGCKHNIDNP 185
           SC +C K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPT MLRLPCYCCAPGC++NID+P
Sbjct: 157 SCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHP 216

Query: 186 TSRPLKDFRTLQTHYKRKHGIKPFSCRKCSKAFAVKGDWRTHEKNCGKIWYCFCGSDFKH 245
            ++PLKDFRTLQTHYKRKHGIKPF CRKC KAFAV+GDWRTHEKNCGK+WYC CGSDFKH
Sbjct: 217 RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH 276

Query: 246 KRSLKDHIKAFGQGHGSLGLDYFDDDNEPASEVEQD 276
           KRSLKDHIKAFG GH + G+D F++++EPASEVEQD
Sbjct: 277 KRSLKDHIKAFGNGHAAYGIDGFEEEDEPASEVEQD 310

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g08210.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZWIP2_ARATH	1.7e-92	63.78	Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1	[more]
ZWIP4_ARATH	3.2e-86	80.23	Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1	[more]
ZWIP5_ARATH	5.4e-86	53.62	Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1	[more]
ZWIP6_ARATH	9.3e-78	55.51	Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1	[more]
TT1_ARATH	3.5e-77	70.56	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1	[more]

BLAST of Cp4.1LG17g08210.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6L1_CUCSA	2.2e-126	77.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428260 PE=4 SV=1	[more]
A0A0D2P7V8_GOSRA	1.5e-95	55.39	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G065400 PE=4 SV=1	[more]
A0A0D2SFC2_GOSRA	7.6e-95	58.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G177300 PE=4 SV=1	[more]
A0A061DVJ5_THECC	1.7e-94	57.06	TRANSPARENT TESTA 1 protein, putative OS=Theobroma cacao GN=TCM_005892 PE=4 SV=1	[more]
K7LWM6_SOYBN	2.9e-94	59.60	Uncharacterized protein OS=Glycine max GN=GLYMA_12G237800 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g08210.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57670.1	9.8e-94	63.78	C2H2-type zinc finger family protein	[more]
AT3G20880.1	1.8e-87	80.23	WIP domain protein 4	[more]
AT1G51220.1	3.1e-87	53.62	WIP domain protein 5	[more]
AT1G13290.1	5.2e-79	55.51	C2H2-like zinc finger protein	[more]
AT1G34790.1	2.0e-78	70.56	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of Cp4.1LG17g08210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436669\|ref\|XP_004136115.1\|	3.1e-126	77.13	PREDICTED: zinc finger protein WIP2-like [Cucumis sativus]	[more]
gi\|659122702\|ref\|XP_008461280.1\|	2.9e-124	76.47	PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo]	[more]
gi\|823147539\|ref\|XP_012473683.1\|	2.2e-95	55.39	PREDICTED: zinc finger protein WIP2-like [Gossypium raimondii]	[more]
gi\|672143636\|ref\|XP_008795700.1\|	4.9e-95	60.40	PREDICTED: protein TRANSPARENT TESTA 1-like [Phoenix dactylifera]	[more]
gi\|297739699\|emb\|CBI29881.3\|	6.4e-95	61.96	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR007087	Zinc finger, C2H2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g08210	Cp4.1LG17g08210	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08210.1:five_prime_utr:001	Cp4.1LG17g08210.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08210.1:cds:001	Cp4.1LG17g08210.1:cds:001	CDS
Cp4.1LG17g08210.1:cds:002	Cp4.1LG17g08210.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08210.1:three_prime_utr:001	Cp4.1LG17g08210.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08210.1	Cp4.1LG17g08210.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 121..141 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 119..146 score: 10
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 189..223 score: 3.5E-5coord: 119..138 score: 2.
None	No IPR available	PANTHER	PTHR10593	SERINE/THREONINE-PROTEIN KINASE RIO	coord: 120..250 score: 1.0
None	No IPR available	PANTHER	PTHR10593:SF27	SUBFAMILY NOT NAMED	coord: 120..250 score: 1.0
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 186..223 score: 4.09E-6coord: 111..141 score: 8.9