Cp4.1LG16g08630.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACGTGTCTACATATAATTGGTGTAACGATGAAGATACTGAACGTAGGGGAACAAAGCCCAAACCTGCCAATAATAATATCACGGAATCGGAAATTTTTTCTGGTTAAACGGATTTTGCTCCAACTTGTAAGGAAGAGAGGGAATCTTGGAAAGAGAGCGATGAAGAATGAGAGAGATGGGTTTTAATTATTGAGTTTTTAAGGTTTATTACTTCGTTTGATTGTATCCACACAATAATACCCTCCAAAAATCTCCTTCTTCTTCGAGCCTCGAACGCCCATTAAATACTTGCCTTTCTCCTTCGGTCTTGCACACAACCTGTTTGATTATTTGCTCAAGAGAGGGATTGAGGGGGATTGACAGCTCTGTGAGTGGTGGTGAAGGATTTGATGGTCTTTTGATGAGGAAGGCGACTTCGTTTTGAGGTGAGAATAAAGGACCCCAAATTCTTCATCACTTTCATCATCATTATCATCATATCCTCAAATCCATCTCTTTTTACCTCTTCTTCTTTGTTGCCATTAGTTCAAGATCTCAGTGTCCTTGTCTCGTGTGTAATTTCTACATTTCTTACAGTTCTAAGGTGTTGGGTGCACCCATTTGTGGCTTCTGTTCTAACCCAACAGCCCCGATCTGTTTGTTTGCCCACCTCATTCTTTTGGTTTGAATCTTTTTTAAGAAACGAAATCAGAGATTTTGGAGATATGGGTCATTGCATCTAGACTCTTTAGCTTTATTATCCTTAATTTTCCCCCTCTTGGGGTTCCAGGTGTCAGAAAACCACAATTGATTTGAGACTGCCCCACTTAATCGACAAGCTTCATTCGTGGGTTCATCCAATACAACCTATTTAACTCTCCTCCCCTGATTTTTATTTGAATAACAGCTGGGTTTGGGCGTTTTCTACGTTTGAATGCTTTAAAGGAAGAAAGATTGAGAAGCTGAGGAAGCTGTAAGTTAAGCCGAAATTTCAACACCAGAGTTTGTCTTGTGAGGTGGCTAAAGGCACCTCTAGTTTGCTCTGTTAGAGTTTGGCGAGGAGGCCCACCGTTGGGGTTGGTGGGCTTATTTGATCGGATTAGAACCCTCATCTGAAATGTGCCTCAGGCTCCCATACTAAGCTTACCTTTTCCCCTTGTTAACCATTGTGTTCTTCCCACAGTTGGTTCTTCCATTGATCTTTTCCACTGTCTTTTATTTGATAAATACCTCTTTTGTGATGCTTCTTTGTTTCTTCCTCACATGTATTTCCTTCATTTTCTTTTTAAGGTCCCTCCTTCTCAAACCTCTCCCATCATGGGCAGGTGAGATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCTATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCCTTGGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAATCAAAACAATCAGAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCTCAGGTCTATAACCGTGAGGTAAACATCTAGTGATCATATACTTCAAGTTGTTAACTAACTTCTTTTTTATGTATTCAGATTTCACCCCTTCTCATCATTAAGTTTTTAGCTCTTCCTGATCTAAATATTCAATTATGCAGAATGGCCATGTTGGTTTCATGTTGTCTTGTTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTGATTAAGCGAACTGCCCTTGTCTAACTCGATCGCGCAATTATCGTGCTGTTACCGTCTTTCTTTTACTTAGTTTCATTACAGTAGTAGTAAATGGACTGTTTGTTACAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCTGACTGTTTGAACGAATTATTCCCTGGTGACCACATTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTTGTTCTTGAGCCTAGATCTATTTTCAGCTTTGGAATTATCTTATATAATTTCTACTCCTTATAAAAGAACTTTGTTTCGTATTAATATACTTATAGAAAAGTAATCATATCAAGAAGCCTTCACTCCTTAATAGAAAAGATAGATAAGGAAAACATGAACTGTTGTAACCTTTTGTAGCTTTGTTTGAGTCGTTGGTTAATTTTAAGGGGTTGTAAAATATGGCATGTACATTGCAGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGGTGAGTTTTATTCGGCACTTTTAATTTAAGCATTTATTTTGGATTGTTCCTTGGTGTGTGTGTTCTGAAATCTTGATTGTGAGATTCAGCTCCAAATATAAACCAATTAAATGGAAATAACGCATAAAGAATCAAGAGAGGTCCACAAAAAGAGGGGACATAGCCAAAAAAGAATACAAAGAACCAACTTTTGGTAATAAGAAACAGAGGATGAAGTAAGTTTGACTTAAGAGCACAAAGAGATGCATTACAATGGTAGGTAAATAGGTTTAGGTCAGGGAATATCATTAAGGAAGGTTTTCGGTTGAGTCGTTCCTTCCTGTTCAATCTCATTAATCATTCCTTAAACCTTAAACCTGACTTAAACCTTCCAAAAGAGAAGAAATTGATGAGGCAAGAAAACTGAAAGAAATAAGCTACAAGCTCCCCATCAACTGCCTCGGTTCGAGGGTTTTTACTTTCGAGTCAGGTCCACTCCTTTCATAAAACAAGGTCAAAATGACCGGCTCAATGAGCCGCCTTTAAGCAGTGCTTCTCTTGTCGACTCATAGATGATGAGGCAAGAAAACTGAGTGAAAGAAAATAGTTTGGTCTCATTACTCTTTCTTTAAGAAACTTAAAAGAAACAAGCAAACACCTACCTATTTAGAACCTCAATCAAAGAGATAGTGAAACCGAGTTCAATCAGGGGAGGATAATTATGAGTAAATTAGACTTAGGAGCACAAAGAGATGCATTAAAAGGTTCTGCCCCCACCCCTGTCTTAGAATTATTATTATCTGAACCTTTATATTTGTAGAAAATTACCCAAACGTTCTTTAGAAGATTAGGCATTACTTGAAATGTGGATGAAATGAATGTGGCATGGGCAGAGCCAGTTTGTCTGGGTTGCCATTTCAGCACCCTATCAAAAAGCATCTCATTTTTTAAATGTGGACCAAACTTTTTGTGCTATTTGATTGGTCCCCTAGACATTATTGTCAGTATGTTATTATTTCTACCAACATATTCATAGCTTAGTCTGAGTGGAATTCTTATGTCCAACCACTCATCAATTGAATTGTCTTAGTGGAACGTTTATAGGCCAACCACTCTGACGTAATTGAACGTTTCCCTAAGCCCTAAGCCTTTTGAGTTGGTGATGTCTTGTATAGTAATGCTATGAATGACCAGTCTCTTCTACGGGTAATAATAGAAAGAAGCAAAAGAATATTCTCCTGTACTTCTAAGACATGTCGTGGATTTGAGATTCAAACCTCTAACCTTTTAGTTAAGAATATAATGCTTTAACAAATGGAGTTATACTAAGTTGACATTCTTACGTATTAATGATGAAGACTAAAAGTGGTTGTTTATATGTAAATTTTGTCAACAGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATAAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATCGACGGGTTCTACGGAGGAATCAGGAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAGTAGATCCTTCTTCTTCCTTTTGTATAAACCAATTGTTTTGCGTTGTTCAGGATATGAAAAGTGATGACAGCAGAAGAAGATAAAAGGGAATCTGTATGGATTCATTGACGTGAAGAGCATAGCTGTCTACTCTCCTTCCCACATTGTTGAGCTAATCTATTGCTTTAAATGTTATTTTGTTCCTTCTTTTTTGGTGGGAATCTCTCCTCGCTTTAATGCGATTTGTGGTCCTTCTAAAATTGCCTCCCTCTGATGCCTACATTCATGTTCAACACACGAGAGACCTCATGATTGGGTAGTTCAGCGTCCCTTCCTTCCTTTTTGTTGTTGTCGTGGGACAAATTTCAAGAGTTGTAGTTTTCAGGGCATCACACGCCTTTCATTCAAATAAAGAAAAAAACATATGCTACCATTCATGCTTATCAGATTGTTCATCGTAACGCTGTGGAATCTGGCTTCCTATAATGGAAATTAATCCCGGGAGCCCTTGTTGACGATCCTTTACTCCGATAGCATCTAGGGTTCCTTGAACAATGTGATCTCACACCGGGTAAATTCTTAACCCTTCCCCCTCCTACTAAGACTACATGTTCTTGTAAATTATGGCCAATACCAGGT TGACGTGTCTACATATAATTGGTGTAACGATGAAGATACTGAACGTAGGGGAACAAAGCCCAAACCTGCCAATAATAATATCACGGAATCGGAAATTTTTTCTGGTTAAACGGATTTTGCTCCAACTTGTAAGGAAGAGAGGGAATCTTGGAAAGAGAGCGATGAAGAATGAGAGAGATGGGTTTTAATTATTGAGTTTTTAAGGTTTATTACTTCGTTTGATTGTATCCACACAATAATACCCTCCAAAAATCTCCTTCTTCTTCGAGCCTCGAACGCCCATTAAATACTTGCCTTTCTCCTTCGGTCTTGCACACAACCTGTTTGATTATTTGCTCAAGAGAGGGATTGAGGGGGATTGACAGCTCTGTGAGTGGTGGTGAAGGATTTGATGGTCTTTTGATGAGGAAGGCGACTTCGTTTTGAGGTGAGATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCTATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCCTTGGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAATCAAAACAATCAGAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCTCAGGTCTATAACCGTGAGAATGGCCATGTTGGTTTCATGTTGTCTTGTTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCTGACTGTTTGAACGAATTATTCCCTGGTGACCACATTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATAAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATCGACGGGTTCTACGGAGGAATCAGGAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAGTAGATCCTTCTTCTTCCTTTTGTATAAACCAATTGTTTTGCGTTGTTCAGGATATGAAAAGTGATGACAGCAGAAGAAGATAAAAGGGAATCTGTATGGATTCATTGACGTGAAGAGCATAGCTGTCTACTCTCCTTCCCACATTGTTGAGCTAATCTATTGCTTTAAATGTTATTTTGTTCCTTCTTTTTTGGTGGGAATCTCTCCTCGCTTTAATGCGATTTGTGGTCCTTCTAAAATTGCCTCCCTCTGATGCCTACATTCATGTTCAACACACGAGAGACCTCATGATTGGGTAGTTCAGCGTCCCTTCCTTCCTTTTTGTTGTTGTCGTGGGACAAATTTCAAGAGTTGTAGTTTTCAGGGCATCACACGCCTTTCATTCAAATAAAGAAAAAAACATATGCTACCATTCATGCTTATCAGATTGTTCATCGTAACGCTGTGGAATCTGGCTTCCTATAATGGAAATTAATCCCGGGAGCCCTTGTTGACGATCCTTTACTCCGATAGCATCTAGGGTTCCTTGAACAATGTGATCTCACACCGGGTAAATTCTTAACCCTTCCCCCTCCTACTAAGACTACATGTTCTTGTAAATTATGGCCAATACCAGGT ATGAGGTTCTTGTCCCATTGGCTATGGAAAGAATTATCGTTCCTTCCTATCTACAAGGTGATCAAGAATAGTTTTTGTACTTATATATCTAGTATTCCATCCAATATATCCTTTAAAAAGAAGCATCTTTCGAAAGTAGAGAATGTTGAGGAAAGTGATGCGATGTCCGTGTTGGACTTGCCGGAATTGGCCTTGGAATGCATTCTAGAGAGTCTTCCACCTGATGCTCTTTGCAGTATGGCGGGTGTTTGTAGATCATTGAGAGAGAGATGCATAAGTGACCATCTTTGGGAGAAGCACATGAAAAGAAAATGGGGTAAAGTTATTGGTCAAGCTGCTTACAGAGAGTGGCAATGGCATCTTGCTTCTAGAGCGGGTGCGGGTAACCTTAATCAAAACAATCAGAGGAGCTTAATTAGACTTTTTTCCTTTGGTTGGTCTCTTTCATGGATTAGATCAAAGGTTCATGACAAGAACACGCCACGTAATTCTCTACCGGTTGATTCTATCATGGCTTGGTATCTTGCTCTTGAAACTGGCAAATTCTGGTTCCCGGCTCAGGTCTATAACCGTGAGAATGGCCATGTTGGTTTCATGTTGTCTTGTTATGATGCGGAGCTTTGCTATGATCCCCGTTCGGACACCTTCCAAGCGAGGTATCCTCCACATGGTAGGCGAGCAATCGCACTAGAAAACGGGGTGGAATGGGAGAGGCTTAGAGCACCACCCATCGATACTCCTCCGCACAATCTTCATGTCTCTGACTGTTTGAACGAATTATTCCCTGGTGACCACATTGAGATACAGTGGAGAAAGAACAAAGATTTCCCTTATGGTTGGTGGTACGGAGTTGTAGGTCACTTGGAAACATGTGATGGGAATAATATTCACTGCAGATGTCATTACAGTGACACTGTGGTATTAGAGTTCAATCAGTACAACCCGGGTTCGAGATGGAGACTCGCAAGTATAAACCGAAAAGAACATCGAGAGGAAGGCAACGAGATCGACGGGTTCTACGGAGGAATCAGGAAGCTTCGGTTCGATGAAGAAATTTTGATGTGGAAGCAACTTTGGCCTACAGACATCTTGGAGTAG MRFLSHWLWKELSFLPIYKVIKNSFCTYISSIPSNISFKKKHLSKVENVEESDAMSVLDLPELALECILESLPPDALCSMAGVCRSLRERCISDHLWEKHMKRKWGKVIGQAAYREWQWHLASRAGAGNLNQNNQRSLIRLFSFGWSLSWIRSKVHDKNTPRNSLPVDSIMAWYLALETGKFWFPAQVYNRENGHVGFMLSCYDAELCYDPRSDTFQARYPPHGRRAIALENGVEWERLRAPPIDTPPHNLHVSDCLNELFPGDHIEIQWRKNKDFPYGWWYGVVGHLETCDGNNIHCRCHYSDTVVLEFNQYNPGSRWRLASINRKEHREEGNEIDGFYGGIRKLRFDEEILMWKQLWPTDILE
BLAST of Cp4.1LG16g08630.1 vs. Swiss-Prot
Match: FB121_ARATH (F-box protein At2g32560 OS=Arabidopsis thaliana GN=At2g32560 PE=2 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 5.9e-125 Identity = 212/321 (66.04%), Postives = 244/321 (76.01%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. Swiss-Prot
Match: FB118_ARATH (F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 5.9e-125 Identity = 203/313 (64.86%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. Swiss-Prot
Match: FB132_ARATH (F-box protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.0e-105 Identity = 178/339 (52.51%), Postives = 233/339 (68.73%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TrEMBL
Match: A0A0A0KK05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G430140 PE=4 SV=1) HSP 1 Score: 698.7 bits (1802), Expect = 3.7e-198 Identity = 320/366 (87.43%), Postives = 337/366 (92.08%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TrEMBL
Match: M5X326_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006669mg PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 3.8e-163 Identity = 266/371 (71.70%), Postives = 304/371 (81.94%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TrEMBL
Match: F6HA97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02700 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 8.2e-158 Identity = 250/362 (69.06%), Postives = 296/362 (81.77%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TrEMBL
Match: W9QGU3_9ROSA (F-box protein OS=Morus notabilis GN=L484_013539 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 4.1e-157 Identity = 253/338 (74.85%), Postives = 290/338 (85.80%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TrEMBL
Match: A0A061GZD9_THECC (F-box family protein isoform 1 OS=Theobroma cacao GN=TCM_040879 PE=4 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 1.6e-156 Identity = 260/369 (70.46%), Postives = 298/369 (80.76%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TAIR10
Match: AT2G26850.1 (AT2G26850.1 F-box family protein) HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-126 Identity = 203/313 (64.86%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TAIR10
Match: AT2G32560.1 (AT2G32560.1 F-box family protein) HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-126 Identity = 212/321 (66.04%), Postives = 244/321 (76.01%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. TAIR10
Match: AT2G41170.1 (AT2G41170.1 F-box family protein) HSP 1 Score: 384.8 bits (987), Expect = 5.9e-107 Identity = 178/339 (52.51%), Postives = 233/339 (68.73%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. NCBI nr
Match: gi|449444853|ref|XP_004140188.1| (PREDICTED: F-box protein At2g32560 [Cucumis sativus]) HSP 1 Score: 698.7 bits (1802), Expect = 5.2e-198 Identity = 320/366 (87.43%), Postives = 337/366 (92.08%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. NCBI nr
Match: gi|659097465|ref|XP_008449641.1| (PREDICTED: F-box protein At2g32560 [Cucumis melo]) HSP 1 Score: 698.0 bits (1800), Expect = 8.9e-198 Identity = 320/366 (87.43%), Postives = 335/366 (91.53%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. NCBI nr
Match: gi|645241816|ref|XP_008227257.1| (PREDICTED: F-box protein At2g26850-like [Prunus mume]) HSP 1 Score: 589.0 bits (1517), Expect = 5.8e-165 Identity = 270/371 (72.78%), Postives = 305/371 (82.21%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. NCBI nr
Match: gi|595878607|ref|XP_007212266.1| (hypothetical protein PRUPE_ppa006669mg [Prunus persica]) HSP 1 Score: 582.4 bits (1500), Expect = 5.5e-163 Identity = 266/371 (71.70%), Postives = 304/371 (81.94%), Query Frame = 1
BLAST of Cp4.1LG16g08630.1 vs. NCBI nr
Match: gi|225435860|ref|XP_002263423.1| (PREDICTED: F-box protein At2g32560 isoform X2 [Vitis vinifera]) HSP 1 Score: 564.7 bits (1454), Expect = 1.2e-157 Identity = 250/362 (69.06%), Postives = 296/362 (81.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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