Cp4.1LG16g08540.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGCGGCCCAGCCCATTAGCTTACGGCCCAATAAAATTGAGCCCATGAAATAGTTGCCGCCTTCGGCGTGCCCGACATTCGGGTCGGATGATCCGATACAAACTATAGAACTTGCAAGGCGGCAATAAGGCGGGAATTTGCGCCCCAAGCTATAGCTTCTCTCTGACGCTGTAACCAGTAGCTGCTTCATTCTCTTCTTCTAGGATATCTGATTTAGGGTTTCTGCGTGTTCTCTGGTTCACTCTCCCTTTACTGTGTTAAACTGATTAGGAGATCGTCAGAGAGAGTTACATTCCAGATTGTGAAGGATTCTTCGCGTTGGAGACTTCAGCGGTAGCACGATGGTGGTGGTGGAAGAGAATCGATCGGAAGAGCAGAGCACCGTGGAAACAACGATTGATGACATCGAGGCTCTCGTTGATTTAAAATCTTCGATCTCTTCCGTATCAAATCCTCTATTTCTGGTTTGTTCTCATTTCCTTCCATTGCAGAATATCTCTTCATCTTCTTATCAATCTTTCATAGAGTTTTCCGTTGTGTGGTTAAACGAATTCGCGTTGAAGTTCAGTGAACCATGGATTTTTTATACCACATTCTTGAATGGCAATAAAAGTCGCTTAGTAATTGGACTCGAACAATTCTCGAGAAACTCACAAGTGAAAGATTCCTATGTGGCTGTTATCCTTTTCAATATTTCTCAGAATTCACACACAATATCTGCAGTTCAATGAAGCTTTTGGTCTTAATTACAACTAGCAAATTTCTTGAAAATGCGAATGTTTCTTATGCGATGGTAGGGAATCTAAAACAAATACTGATCTGCCGAGTTTAGTATAGTGGTAGAAGCATTGTTTCTACAATTTCAAGTCATCGTAAGGTTATATAACGTTATGAATAGCATTTCCGTTCCTATGTTAACCTAGGAAATGTATGAACAACTTGAATTCCGAAAACACCGGATTACCAAATTGTTCACCTATGAAATAACTTTAGGAAAGTAGTACATCATACTTGTGAAATTAATCAAGATATTAGTGATTTTTAAGGGTCCAGTAACGAAGGACTTAAATGTTGTAATGTCACTTGACAGGGTGCTAGATACAATGATGTAGATGATGTAACACGCCTTGCTTCTGCTGGTGTTCATCTCGATTCCAAGGAATTCCGGTGGCCGAACTGGTATTTCTTACCTTCCATATTTGATAATATATACACATATTTTTTATGTGCACTACAATCGATCCAATTATTTTATTTGTTGGTGATTTTCACTTCCAAGTGAACTTTTCAAAACTTAGATATCATGTTAAACCACCCACTATAAATCAAAAGCTTAATCAAGATTAATTAGTGAATTAGAGAAGATAGAGGAAATATCGTTACTTTTTTAATTTAAATGTTCTATGTTTAAAATAGAAAAAATATCTAAACAATATAGCAAACGGAGTAGGGACCGATTAAATTTATTTTAAAAAATTGAGGGACAAGAAACATAATTTTATCTTTTTTTTTTTTCTTTTTCAATGCATATACTTAGCCCCAAAAGAATATTTTATTTCTCTCGATAATTATATATTTTTTCTTCCCTGAAAAATCGTGACCTAATATTTTCCCATAAGCGGCCCATACCATTAGTTTATTGGGCCCATGAAATAGTTACCTTCGGCCTGCCCCGACATTCGAGTTGGCTATCGAGTCGGGTGACCCGGTAAAACTATACAACTTAAAAGGCGGCAGTAACGCGGGAATTACGCCTCAAGCTCTAGCTTTGCTCTGACGCTGCAACCAGTAGGTGCTTCGCTCTCGTCTCCTAGAATCGCCGATTTAGGGTTTTCTGCGTGTTCTTTGGTTCACTTTCTCTTTACAGTGTTAGACTGATTAGGCGATCGTCAGGAAGAGTTACAGTCCAGATTGTCAAGGATTCTTCACGTTGGAGACTTCAGCGGCAGCACGATGGTAGTGGAAGAGAATCGATTGGAAGAGCAGAGTACCGTGGGAACGAATACGGATGACATCGAAGCTCTGGTTGATGTAAAATCTTCATCCTCTTTCTTTATTAAATCATTTATTTCTGGTTTGTTCACTTTTCCTTCCGTATAGTTTTCCTTTCATATCTCTTTATCTTCTTATCAATCTTTCATATAGTTTTCCTTGGTGCATTTAAACGAATTCGCGTTCAAGTTCAGTGAACCTTCAATCTTTTATACCACATGTTTAAATAGCAATAAAAGTCGCTCAGTCTTGTCCTCAACCAATTCTCGAGAAAGCATAAATGAAAAATTCGTATGTGACTGTTATTCTTTTCTATATTTTTCAGAATTTGCACAATATCTGCGGTTCATTGAAGCTTTTGGTTTGAATTATAACAAGCAAATTTCTAGAAAATGCGGATGTTTCCTATTCGATGCTAAGGAATCTAAAATGATGTTTCCTATTCGATGCTAAGGAATCTAAAATGATGTTTCCTATTCGATGATAAGGAATCTAAAATGAACACTACTCTGCAGCGTTAAGTGTCGTGGTAGAAGCTATGTTTCTACAATTTTAAGTCATCATAAGGTCATAGAACGTCATGGAGAGCATTTTGGTTCGCATTTTGGCCAAGGAAACGACGAACAACAAGAATACTGAGAATACTATGGATTAGCAAATTGATCGCCTATGCAATGATTTTGGAAACTTAGTACATCATATTTGAGAAACTAATCTGTATATTTGTTATTTAAGGGTTCAGTAATGAAGGACTTGGATTTTGTGATGTCACTTGACAGGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGGTATTTTTCTTCAATATTTAACAATATGCTTTTTTTCTTCAATATTTAACAATGTGCTTTTTTAATTTATTTATGTGCATCACAATAGCTTGATATAGAAATCCAATTATTTTATGAGTTTTTGTTAAATCGCCATTAAACAAAATGCCTAAGCTTATGAGATGATTGATTGGTGATTCAAAATGGTATCAGAGTAGGAGTTAGAGCATGAGGTCCTATGTTCAAACCCTATGATGTCATATTTTCAATCCCATAAGTGAGGGAAGTGTTGAAGTGGTTTGTTGAAAACTTTGATATCCCTGTTAAATCACTCGTTAACCAAAAAGGTTGCTTGATGATTTAACAAGTTTAGTCTACGACTTATGTTCCCTCAGCTATTCCAACATTTCAATAAAAGCTTTTGTTCCTATTAAGAAACACTTAAGCTGAATTGATAAACATTTTGTTTTTGAAAACTAAGCTCATAAACACTATTTTCTTTTATAGCTTTCTTGTTTTGTTACCTATTTTTGGAAACGTTCTAAAATATGAAGCCAATATTTTGAAACTAAAAAAAAAAAAAAAAAAAAAAAAANTGTAGTTCTTACATTTTGGATTTTGTTTTTTTATTTATTTTGGCTTACAATTGAAAAGTGTTTTTAAGGAATGTGAAACGCCTAACCAAAAGCGTTTAAGAAACAAGCTATATTTTAAAACAGAAAAAATCATAAACAAGATGGTTATTGAATGGTGGGGACTTTTACTCTATTGAACATACTCATACTTTCAGTCCTGGTATATTTTGTAATTCAATTTACAAACAACAATTTTTTAGTTAGTCGAGGTCCTCAGATGTGAACTTCATTGATTTTTTTTTGGGTGCAAGAATATTTTGCTAATTTCTAGATCATTCGATGAGTATGGAGCCATTGAGAATGCTATCAAGTCAGCTCTTTCATTGTAATCTCTGTTATTTGATTGTAGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGTAAGATATCTACTTGTAATTTTACCTGCTGCTTGGGTTATCTATTTTTCTCCACTGACTAATAGTTGACAGAGGGGTTAGCCTTTCTCAAGAAACAGCTCCTTGCATCAGTTTTCCATGCATCTGTGTTATCCATAATGATGATTATATTACCGTATCATCATCATTCTTGTCGTCATTCTGGCTGTTGAACTATTTAGTTAATGAATTTGGACTGCTACAATTCCTTTTGTCTGATTGATTTGAACTTGGTTATTTCTCCAACGACTCTATTCCCGTTATATATATTCTGTTGTAGTGTTTTATACTGGATACAGTTCAATTCAGTTTGTTCACTTGTATGTTTGTCACCGACTTGCCTTACTCTGTATCTTCCCAATTTATTTTAATCTTCTGTTTGATGAAAATGACAATTGTAACTTACCATTTTAAATCCTGTGATTGGATTCAGCGAATTTTACCCATGCAATCTTGACCTCCAATCTTATTTTTAACCTCTTCGAGTGTGAACAGGATGTGAATGCTTTGAATGCGGAGAAGAATACACCACTTCATTGGGCATGTCTGAATGGGCATATTGAGGTAATGTTCTAAATTCTATTAGCTAATTTCTAGGTTTAGTTTCTGATTTTTCATATCTTATATATCTCCTAACTTCAATAATGGATAAGTTAAAGAACTTTAAACCTATCAAATAGAACATTAAAACTTTCAATTTTGTAGTTGATAGATTGTTTGTTTATTCAACATTTTCTGAATTTTCAAACCTACTAAACATTAAATTGATTTTTGTTTTATTACAAGAATTTTTAAACTTCTAATTTGATGTTCATTGGGGTCATAATAGTTCTATTTGACAAGTTGGACTTGAAATAGAAAATTTAGGAACTTATTAGACATTCTTATCATAAAAATTCTATTTCTCATCTTGTTCACTCATTCCTTTAGGTGGTTAAGAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGGTATGTAATATTTTATAACTAGATGAGAGATTTAATAAAAACATTATAAAATGGATCTCTATCTGTTCGTAAAATTTTAAACATTATATTTGTGTATAGCCATGAGAAAACTCCCATGGACGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACCGCAGTGGCGCAAATCGAGCTCACGGGCATCAGTGTTTCACGTATGGAAACATAGGTGAGGGAATTCGACTTTTTTTTATTATTTATTTGCTTAATAAGTAGGAAAAATTCTCAGTCTTAGGATCAGAAATATGCTTCCATCTTATTTTGCACTTCTCCACCCAGGAACTCTTAGTTAGAGTTTCAAATTACTTTGCACTAAAAATTAAGCATCCATCTCCTTTTGAATACCCCAATTACTTTCTTTTCAATTTTGCATGTTTTAATTAGATATCCAGTTATTTCTCAAAAATTATATAAAAGTACGCAATGGAAGGCATAAAGGGAATTTACTTTTATTTTATTTATATAGCCGATCGAATAGTTATTGTCGATCGTGGATATAGAAGTAATTAACATCTAGTTTTTCTTTTCACCC AAGGCGGCCCAGCCCATTAGCTTACGGCCCAATAAAATTGAGCCCATGAAATAGTTGCCGCCTTCGGCGTGCCCGACATTCGGGTCGGATGATCCGATACAAACTATAGAACTTGCAAGGCGGCAATAAGGCGGGAATTTGCGCCCCAAGCTATAGCTTCTCTCTGACGCTGTAACCAGTAGCTGCTTCATTCTCTTCTTCTAGGATATCTGATTTAGGGTTTCTGCGTGTTCTCTGGTTCACTCTCCCTTTACTGTGTTAAACTGATTAGGAGATCGTCAGAGAGAGTTACATTCCAGATTGTGAAGGATTCTTCGCGTTGGAGACTTCAGCGGTAGCACGATGGTGGTGGTGGAAGAGAATCGATCGGAAGAGCAGAGCACCGTGGAAACAACGATTGATGACATCGAGGCTCTCGTTGATTTAAAATCTTCGATCTCTTCCGTATCAAATCCTCTATTTCTGGGTGCTAGATACAATGATGTAGATGATGTAACACGCCTTGCTTCTGCTGGTGTTCATCTCGATTCCAAGGAATTCCGGTGGCCGAACTGTGTTAGACTGATTAGGCGATCGTCAGGAAGAGTTACAGTCCAGATTGTCAAGGATTCTTCACGTTGGAGACTTCAGCGGCAGCACGATGGTAGTGGAAGAGAATCGATTGGAAGAGCAGACGTTAAGTGTCGTGGTAGAAGCTATGTTTCTACAATTTTAAGTCATCATAAGGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGTGGTTAAGAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGCCATGAGAAAACTCCCATGGACGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACCGCAGTGGCGCAAATCGAGCTCACGGGCATCAGTGTTTCACGTATGGAAACATAGGTGAGGGAATTCGACTTTTTTTTATTATTTATTTGCTTAATAAGTAGGAAAAATTCTCAGTCTTAGGATCAGAAATATGCTTCCATCTTATTTTGCACTTCTCCACCCAGGAACTCTTAGTTAGAGTTTCAAATTACTTTGCACTAAAAATTAAGCATCCATCTCCTTTTGAATACCCCAATTACTTTCTTTTCAATTTTGCATGTTTTAATTAGATATCCAGTTATTTCTCAAAAATTATATAAAAGTACGCAATGGAAGGCATAAAGGGAATTTACTTTTATTTTATTTATATAGCCGATCGAATAGTTATTGTCGATCGTGGATATAGAAGTAATTAACATCTAGTTTTTCTTTTCACCC ATGGTGGTGGTGGAAGAGAATCGATCGGAAGAGCAGAGCACCGTGGAAACAACGATTGATGACATCGAGGCTCTCGTTGATTTAAAATCTTCGATCTCTTCCGTATCAAATCCTCTATTTCTGGGTGCTAGATACAATGATGTAGATGATGTAACACGCCTTGCTTCTGCTGGTGTTCATCTCGATTCCAAGGAATTCCGGTGGCCGAACTGTGTTAGACTGATTAGGCGATCGTCAGGAAGAGTTACAGTCCAGATTGTCAAGGATTCTTCACGTTGGAGACTTCAGCGGCAGCACGATGGTAGTGGAAGAGAATCGATTGGAAGAGCAGACGTTAAGTGTCGTGGTAGAAGCTATGTTTCTACAATTTTAAGTCATCATAAGGCTGCGAGATACAATGATGTCGATGATGTAGTAAGTCTTGCTTCTGCTGGTGTTCACCTCGATTCCAAGGATTCCGAGGGCCGAACTGCTCTACACATGGCTGCTGCCAATGGACATCTTTCGATAGTGGAGTTTCTCATAAGTAAGGGAGTGGTGGTTAAGAAGTTGATCTTGTCAGGAGCAAATGTTAGCCTATTGAACAGCCATGAGAAAACTCCCATGGACGAAGCTCTGACACGGGGGAAAATGGATGTAATTGACGCGATCAACACCGCAGTGGCGCAAATCGAGCTCACGGGCATCAGTGTTTCACGTATGGAAACATAG MVVVEENRSEEQSTVETTIDDIEALVDLKSSISSVSNPLFLGARYNDVDDVTRLASAGVHLDSKEFRWPNCVRLIRRSSGRVTVQIVKDSSRWRLQRQHDGSGRESIGRADVKCRGRSYVSTILSHHKAARYNDVDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLISKGVVVKKLILSGANVSLLNSHEKTPMDEALTRGKMDVIDAINTAVAQIELTGISVSRMET
BLAST of Cp4.1LG16g08540.1 vs. Swiss-Prot
Match: SECG_DICDI (Ankyrin repeat, PH and SEC7 domain containing protein secG OS=Dictyostelium discoideum GN=secG PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06 Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. Swiss-Prot
Match: ANR28_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06 Identity = 50/209 (23.92%), Postives = 89/209 (42.58%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. Swiss-Prot
Match: ANR28_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=5) HSP 1 Score: 53.1 bits (126), Expect = 4.7e-06 Identity = 48/209 (22.97%), Postives = 89/209 (42.58%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. Swiss-Prot
Match: ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.7e-06 Identity = 45/190 (23.68%), Postives = 84/190 (44.21%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. Swiss-Prot
Match: ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 6.1e-06 Identity = 45/190 (23.68%), Postives = 84/190 (44.21%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TrEMBL
Match: K7L6U2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G150200 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32 Identity = 75/108 (69.44%), Postives = 92/108 (85.19%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TrEMBL
Match: A0A124SCV1_CYNCS (Ankyrin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_003001 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.5e-31 Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TrEMBL
Match: A0A0A0KI98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431770 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 74/140 (52.86%), Postives = 83/140 (59.29%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TrEMBL
Match: M5WHV5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012824mg PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 72/155 (46.45%), Postives = 95/155 (61.29%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TrEMBL
Match: D7T159_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03440 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.0e-21 Identity = 70/133 (52.63%), Postives = 83/133 (62.41%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TAIR10
Match: AT5G12320.1 (AT5G12320.1 ankyrin repeat family protein) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18 Identity = 56/138 (40.58%), Postives = 76/138 (55.07%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TAIR10
Match: AT4G35450.5 (AT4G35450.5 ankyrin repeat-containing protein 2) HSP 1 Score: 48.5 bits (114), Expect = 6.5e-06 Identity = 29/103 (28.16%), Postives = 52/103 (50.49%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TAIR10
Match: AT2G03430.1 (AT2G03430.1 Ankyrin repeat family protein) HSP 1 Score: 48.5 bits (114), Expect = 6.5e-06 Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. TAIR10
Match: AT2G31800.1 (AT2G31800.1 Integrin-linked protein kinase family) HSP 1 Score: 48.1 bits (113), Expect = 8.5e-06 Identity = 29/94 (30.85%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. NCBI nr
Match: gi|571468905|ref|XP_006584498.1| (PREDICTED: uncharacterized protein LOC100306615 isoform X1 [Glycine max]) HSP 1 Score: 147.1 bits (370), Expect = 3.8e-32 Identity = 75/108 (69.44%), Postives = 92/108 (85.19%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. NCBI nr
Match: gi|976907599|gb|KVH94931.1| (Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 142.1 bits (357), Expect = 1.2e-30 Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. NCBI nr
Match: gi|659097501|ref|XP_008449661.1| (PREDICTED: ankyrin repeat-containing protein P16F5.05c isoform X1 [Cucumis melo]) HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23 Identity = 75/141 (53.19%), Postives = 86/141 (60.99%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. NCBI nr
Match: gi|659097503|ref|XP_008449662.1| (PREDICTED: GA-binding protein subunit beta-1 isoform X2 [Cucumis melo]) HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23 Identity = 75/141 (53.19%), Postives = 86/141 (60.99%), Query Frame = 1
BLAST of Cp4.1LG16g08540.1 vs. NCBI nr
Match: gi|449444875|ref|XP_004140199.1| (PREDICTED: ankyrin repeat-containing protein P16F5.05c isoform X1 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22 Identity = 74/140 (52.86%), Postives = 83/140 (59.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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