Cp4.1LG16g08340.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAGTAACTTGTAATTTACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGAGATCCGGTCCAGTATTGAAGGGAATAGGGATGAAGGAGAAGCGTGATAGCAGTTTTTGACAAATCTGAATTTCGAAGTCTTTGAACCCAATTCACCCGATTTTTCCAGAGCGTAGGGTATTACAACCTCATTTCGACATCCTGTAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGTACCTTCCATCTCTTTCTTCTCCTTCTCTATATCTATCTTTTTGGAAAAAGTAATTAGCTTAGAAATTTTCTTGATCATTCAATGTTATGCATTCCACTGCTAATCTGTTCTTTGTTAATGAGTTCTCCATTTCGCTTTCAATTTTTAAACCTTCTTCCCGCTAGAATTTGTTAGTTCATTGTTGGAACGTCACTTGCTACCCGAGGTTAGGACGGATTGGGCTGTTCTTGCTGTTTGCGAGATAACTTGGCCACTGTTTGTTTGGTTCAAAAGAAAAGTGATATTATTCTAAAATAATTGTTTGTCAAATTGTCATCGATTTCTTTCGAAGAAGAATCTGCTTGAATTGATTACTGATAGTTGAAGTACAAGAGACTATTGATTACTGCGCTGATGAAGTACGACCTTAATTTCTTACATCATGATTGCAGCCTTCTGCACGGGAAGTAATGTTAATAGCGAACTTTGTTTCCATTTGATTAACAGCAAACTCTAATTTTTATTGTCTTATTGAATCTTTAGCTTCTTTTCCCTCTTTGATAGATCAACTATATTGTGCCAAAATAAAAACTTTTGAATGGAAGGATCAGACATATCTGAGAAGGATATATGTGCACTGATAGATGTTGCAGCATCAGCCATATGATTGACTTTGATAAACTTGTCAATGATGCTCATTTTTCTGGTGATGGATGCATCAATTTTTAGTGGGAAAACAGAGAGCTAAAATTTGTTTGTCTTTGATTTAGATGTTTTACCAATCATGAAACAAGAAATTAACTAAGACTAGGGGAAGCTTCTAATTCAACTTCAACCACTTGCACTGAGACTAAAATGCAGTTCAAAAGGTTTAGTTGAATGATACATATAAAACTCTATGAACTAGATTGTGAAGTTTTTTCTGTTCCCATTAAGGGTATGTTACAATTATTAGTAGCATAGGTATCCATCCAGTTTGTTAAAAATCTCGTATGATTGTCAGGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGGTTAATTAAATGTTTTGCCCTTACTTCCTGTCCTTTTCGCATGTTCTTGTTGCTGGTTAATTAAATAATGAATGTTGTCTTGTTTATAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGGTATTTTATCTTGAAAATATAACTTTTTTTATCTTATTCCAAATTAACATTTTAAAAGTGATTAAATATATTTGATTTGCTTTAAGGAACCATGAAACCCCTTTTTTCCTAGGATAGCATACAGTTGTTCTTAAATCGCTTCTGAAGTTATCCTTTCTGGTTTTAGTTGATAGTATCTGTTCAGTGGCCCAGATAACAAAAGCTTCCTATTTTTCCTAGAATTTTAAATATAAGTTTGGCTAATATTACATTTTTGGGATGACTGATAACAGATGCATTCTGGAGGAAGCTAAAGTTAGCTGCTGAGCAGAAGGTATGAGCTTCTTCTCTTTCTTTTTCAAGTGTTACATTTTTATCTAAATTAGGGTATAAAACCCCTAGAGTTACTCTGTTATCCTTTTCTGGTACAAGGCCTCGTGTTTATGTTTATAACTCATTAGTTACAATCTATATGACACAAATGGAAGTTCACCAAAAAAAAAAAAATTCGTCTGCTTAAATTCTAGTCATGCCTTTACAATATTATAATTTGTCAACGCATTTTGATCTGAATTTGTCCATTTTTTGCGAAATTAATCATATGCAACTGATTAGTTACTTTTTTTTTTATGTGATGTAAGACTAATGCGTATATTCAGTTTCAGATTTGGTTAAATCGTTGAATGCAAATGAGCATCACTTTAACATAAATGCAAATATCTGGGTTTCTCAACAAATTCCATCTTGATGGTGCATTGCATTATACTTTCATTTGAATGTGAAAGAACAATGTTTATATTTGTATCTAACAGCTTGTTGTTTGCTTATTCATTACACGCAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTAAGTCATTCAGAACATGTCGTGCAATTAGATATTTAGTTTTTCATCCTCCATTGACATTAGAATGAAAATCCTATAATCAATATGACTACAGGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTATGGTTTTCTGCTTAATAAGTCTTGTATTGCATATATTATCTTCTCTCCATAGACCACATTGTGCAAGTCTGATTCAATTACTAACAAGGATTTGGAACAGATAAAATCTTGTTTTCAAGGAATCTGCAAACACTCTCTTTCACATACATTTTTACTCTGGCTTGACCGTAGTTTAATACTTATACGCATTTTTACTCGATACAATATGATGTGACAATATCTTTTTCGATAAGAGAAATAATTTCATTGATAAATGAAATAGGTGGAGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATAACATGATAATATCTCAACCATTCCGACCACCGACACAAAAGGGATAAATAATAACCTCTCCAAATCATGGGAGGACTCGCATCCATAAATTTTGATACTTCATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTCGAACCCGATGGGCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACCTTTGCCAAATCCACATTGGTTTTTATGCCAAGTCCGTGGAGCATGTACACCACATCCTCAGTTGCAACATTCCCGGAAGCTCCTTTTGCATATGGACATCCACCCAGACCTGCAACAGAGGAATCTATTGTGCTAATCCCCATCTGTTCATAAAAGCAACACACCAGTTAATGGTTGAAGTTGGCCCAAATGAAATGAAATCCTAGGCAAAGCTTGCAACTTGCATCCATATATCTGGAAAGCAAGTTTAGAAGGGACCAAGTATATGTTTGAAATGACTTTCAAGTGTATTTTTCTCAACCCTGTCATTATCATAATGTTCTGTTAAATAGGAACAAATTTGATAAATACCGATAACTCTTGGATAGAGTATTAGAACGAAAAAATCCATTAGATAATGAACTATTGTTTCTAAGTCATTTCTGGCGATGAATCAACAATCCGAAGTGTTTTTCTTGCATATTCTTGATAAACCAATGTTTATATATAGATGTAGGAGGATCTATTTGAGAAGTATTTTGAACACTTAGAAAGTCATTCCAAACGGGCTCAAACTTCAGCTTCAAAAGATTCCTTACTTGGAGGGATACTAGAATATTTGGAAGTGATTGTCCATAAGTGTCATGGAAGTGGACTGCAAGCTTGTCCACCGGAACGACAGCCATCACAGCTTCAAGCATGGGAACAACAGTCCCTGTGCCAACAGAGGATACTATAAGAGAGCGAAGAAGATGAAAGCAATCTATATTTCGATTTTGAGAAAGAAAGGTTTAAATTGTTACCGGGCGTGGCAACTCCGATCGTGTCTCCAAGAGAAATTTCAAAGCAACCCATCTCATAAAGCTCCTTCGCTACATAAGCGACTTTAGATGGAGGAATTGATCCTTCTGTTGGACAACCAACAACACATGATACATACCTATACAAATCCATAGCCAGTTATAGCAATAAGAGAACCCTTCAAAAGAACAGAATGAGGAGAACCATTCTAGAAAACAAGTCGTGTTCAAAACTTAAAACCAAAATTCAGAGGAAATTAAAACCAAATTCCAATAGCCATTTATATGGACACTGAGTCATGGAAGCATACCCTCGAACAGGGATTGCAAGCTCTTTTGCAGCAGAAGTTACCGCTCGGTAACGATCAAGACTTTCTTCAATGCTACAATTGATGTTAGATTTTGAAAATAATTCAGAGGCTGATGCAAAGACTGCCACTTCCTTTGCTCCAGCCGCAACAGCTGCTCGAAACCCCTGGAAGAAGGTGAAGTTTTATAAGCGAGGATTCAATCCATCCATGTTTGAAAAAAAAAAAAAATCAACATTATTTTACAAGATGACCCACTTTCAAATTAGGAGTTAAAACTGGCAACCTAGCACCTTCCAAATTACGTACGGCTTCCATGACTTCAGCTGCATCAGATAACTGGACAAAGGATAAAAAAGAA ATAAAGTAACTTGTAATTTACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGAGATCCGGTCCAGTATTGAAGGGAATAGGGATGAAGGAGAAGCGTGATAGCAGTTTTTGACAAATCTGAATTTCGAAGTCTTTGAACCCAATTCACCCGATTTTTCCAGAGCGTAGGGTATTACAACCTCATTTCGACATCCTGTAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAGGAAGCTAAAGTTAGCTGCTGAGCAGAAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTATGGTTTTCTGCTTAATAAGTCTTGTATTGCATATATTATCTTCTCTCCATAGACCACATTGTGCAAGTCTGATTCAATTACTAACAAGGATTTGGAACAGATAAAATCTTGTTTTCAAGGAATCTGCAAACACTCTCTTTCACATACATTTTTACTCTGGCTTGACCGTAGTTTAATACTTATACGCATTTTTACTCGATACAATATGATGTGACAATATCTTTTTCGATAAGAGAAATAATTTCATTGATAAATGAAATAGGTGGAGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATAACATGATAATATCTCAACCATTCCGACCACCGACACAAAAGGGATAAATAATAACCTCTCCAAATCATGGGAGGACTCGCATCCATAAATTTTGATACTTCATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTCGAACCCGATGGGCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACCTTTGCCAAATCCACATTGGTTTTTATGCCAAGTCCGTGGAGCATGTACACCACATCCTCAGTTGCAACATTCCCGGAAGCTCCTTTTGCATATGGACATCCACCCAGACCTGCAACAGAGGAATCTATTGTGCTAATCCCCATCTGTTCATAAAAGCAACACACCAGTTAATGGTTGAAGTTGGCCCAAATGAAATGAAATCCTAGGCAAAGCTTGCAACTTGCATCCATATATCTGGAAAGCAAGTTTAGAAGGGACCAAGTATATGTTTGAAATGACTTTCAAGTGTATTTTTCTCAACCCTGTCATTATCATAATGTTCTGTTAAATAGGAACAAATTTGATAAATACCGATAACTCTTGGATAGAGTATTAGAACGAAAAAATCCATTAGATAATGAACTATTGTTTCTAAGTCATTTCTGGCGATGAATCAACAATCCGAAGTGTTTTTCTTGCATATTCTTGATAAACCAATGTTTATATATAGATGTAGGAGGATCTATTTGAGAAGTATTTTGAACACTTAGAAAGTCATTCCAAACGGGCTCAAACTTCAGCTTCAAAAGATTCCTTACTTGGAGGGATACTAGAATATTTGGAAGTGATTGTCCATAAGTGTCATGGAAGTGGACTGCAAGCTTGTCCACCGGAACGACAGCCATCACAGCTTCAAGCATGGGAACAACAGTCCCTGTGCCAACAGAGGATACTATAAGAGAGCGAAGAAGATGAAAGCAATCTATATTTCGATTTTGAGAAAGAAAGGTTTAAATTGTTACCGGGCGTGGCAACTCCGATCGTGTCTCCAAGAGAAATTTCAAAGCAACCCATCTCATAAAGCTCCTTCGCTACATAAGCGACTTTAGATGGAGGAATTGATCCTTCTGTTGGACAACCAACAACACATGATACATACCTATACAAATCCATAGCCAGTTATAGCAATAAGAGAACCCTTCAAAAGAACAGAATGAGGAGAACCATTCTAGAAAACAAGTCGTGTTCAAAACTTAAAACCAAAATTCAGAGGAAATTAAAACCAAATTCCAATAGCCATTTATATGGACACTGAGTCATGGAAGCATACCCTCGAACAGGGATTGCAAGCTCTTTTGCAGCAGAAGTTACCGCTCGGTAACGATCAAGACTTTCTTCAATGCTACAATTGATGTTAGATTTTGAAAATAATTCAGAGGCTGATGCAAAGACTGCCACTTCCTTTGCTCCAGCCGCAACAGCTGCTCGAAACCCCTGGAAGAAGGTGAAGTTTTATAAGCGAGGATTCAATCCATCCATGTTTGAAAAAAAAAAAAAATCAACATTATTTTACAAGATGACCCACTTTCAAATTAGGAGTTAAAACTGGCAACCTAGCACCTTCCAAATTACGTACGGCTTCCATGACTTCAGCTGCATCAGATAACTGGACAAAGGATAAAAAAGAA ATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGGGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCAAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAGGAAGCTAAAGTTAGCTGCTGAGCAGAAGGTGGGCAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAG MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSDLHDAFWRKLKLAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE
BLAST of Cp4.1LG16g08340.1 vs. TrEMBL
Match: A0A0A0KGZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429090 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-46 Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. TrEMBL
Match: C6T5D5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G277800 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. TrEMBL
Match: A0A0B0PJT6_GOSAR (Octanoyltransferase OS=Gossypium arboreum GN=F383_00866 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29 Identity = 68/113 (60.18%), Postives = 91/113 (80.53%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. TrEMBL
Match: C6SVW8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G036700 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 6.9e-29 Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. TrEMBL
Match: A0A0B2S162_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004068 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28 Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. TAIR10
Match: AT5G12240.1 (AT5G12240.1 unknown protein) HSP 1 Score: 60.8 bits (146), Expect = 6.4e-10 Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. NCBI nr
Match: gi|659097447|ref|XP_008449631.1| (PREDICTED: uncharacterized protein LOC103491458 [Cucumis melo]) HSP 1 Score: 204.9 bits (520), Expect = 7.7e-50 Identity = 107/119 (89.92%), Postives = 111/119 (93.28%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. NCBI nr
Match: gi|449444845|ref|XP_004140184.1| (PREDICTED: uncharacterized protein LOC101203554 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46 Identity = 103/119 (86.55%), Postives = 108/119 (90.76%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. NCBI nr
Match: gi|470110527|ref|XP_004291532.1| (PREDICTED: uncharacterized protein LOC101309697 [Fragaria vesca subsp. vesca]) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30 Identity = 78/115 (67.83%), Postives = 92/115 (80.00%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. NCBI nr
Match: gi|645218313|ref|XP_008229999.1| (PREDICTED: uncharacterized protein LOC103329321 [Prunus mume]) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30 Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 1
BLAST of Cp4.1LG16g08340.1 vs. NCBI nr
Match: gi|351721436|ref|NP_001237209.1| (uncharacterized protein LOC100527775 [Glycine max]) HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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