Cp4.1LG15g02670.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g02670.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 2595588 .. 2597331 (+)
Sequence length1427
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTTTTTCAGTGCAAACTCGAGAAACGCTAGTACTTTGATGGTAGAGGAGGTGAACTAACAAGTGGAACTTTGAGAGGAGCCGTCCCTGAAATACAAGGATGACAATGGTGAAGCAATGGGTGGATTGTTGGGGCGAGGTGGCAAAACTATTGATGGAATGGTTGGACGAGGGGGCTAAGCAGTCGATAGAATAAATTGATAAGGGTGTGAAGTCATTGGTGGAATGCTAGGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATAATAGCGCGAGGGGGTGAAGCTATTGGTGGACTGCTTGGACGAGGGGGTGATGCTNTTTGATGTTGATTGTATGTTGATTGGGGGTGATGCTGTTGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGTGAAATGATGGGACGAGGGGGCGAAGCCACGGGTGGAATGCTTGGACGAGGAGGTGATGCTATCGGTGGAACGATTGGACGAGGTGGTGAGGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGAGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACTATCGGACTAGGTGGTGAGGCCATGGGTGGAATGTTCGGATGAGGTGGCAAAGTTGGTGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTAGACGAGGGGGTGATGCTGTCGGTGGAACTATCGGACTAGGTGGTGAGGCCATGGGTGGAATGTTAGGACGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATAATAGGACGAGGGGGCGAAGCCATTGGTGGAATGCTAGGGCGAGGTGGTGAAGTTGGTGAAATGATGGGACGAGGAGGCGAAGCTATTGGTGGAATAATAGGACGAGGGGGAGAAGCCATTGGTGGAATGCTTGGACGAGGAGGTGATGCTATCGGTGGAACGATTGGACGAGGGGGTGAAGCCATTGGTGGAATCATGGGGCGTGGGGGCAAAACAATTGGTGGAGTGGTTGGTCGAGGAGGCGAAGCAATTGGTGGAATGTTGGGATGAGGCGGTAAAGCCATAGGTGGAATGCTCGGAGGAGGCGGTGAAGTTGGTGGAATGTTGGGACGAGGTGGAGGAGGTGGTGGGGGTGGAATTGTAGTTGGAGGAGGAGGAGGTGGTGGTCTAAGAGGAAATATTGGTGGTAGTATTAAAGGTGGAAGAATAGGTAGAGGAGGGAGACGGATAGGTGGTATTGGTATAAGAGGAGGGAGACGGATAGGTGGTATTGGAGGGAGACGGATAGGTGGTATTGGTACAAGAGGAGGGAGACGGATAGGTGGTATTGGTACAAGAGGAGGGAGACGGATAGGTGGTATTTGTAACGGGAGAGTAAGCAATTGTGAATTGACATGTTGGTCGGACGAGGAAGGTGTTTGTTGGAGACGGCGGGCTGCTTCACTCGCCTCAATATTCAAACAACATAAACTCACAAAAACACCAAACAACACAACTAAGGTCTTGTAGGAAGCCATCACATAATCAAGCTTCCTTCACTCACA

mRNA sequence

ATGGTGGAGCCGTCCCTGAAATACAAGGATGACAATGGTGAAGCAATGGGTGGATTGTTGGGGCGAGTCATTGGTGGAATGCTAGGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATAATAGCGCGAGGGGGTGAAGCTATTGGTGGACTGCTTGGACGAGGGGGTGATGCTATCGGTGGAACGATTGGACGAGGTGGTGAGGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGAGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACTATCGGACTAGGTGGTGAGGCCATGGGTGGAATGTTCGGATGAGGTGGCAAAGTTGGTGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTAGACGAGGGGGTGATGCTGTCGGTGGAACTATCGGACTAGGTGGTGAGGCCATGGGTGGAATGTTAGGACGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATAATAGGACGAGGGGGCGAAGCCATTGGTGGAATGCTAGGGCGAGGTGGTGAAGTTGGTGAAATGATGGGACGAGGAGGCGAAGCTATTGGTGGAATAATAGGACGAGGGGGAGAAGCCATTGGTGGAATGCTTGGACGAGGAGGTGATGCTATCGGTGGAACGATTGGACGAGGGGGTGAAGCCATTGGTGGAATCATGGGGCGTGGGGGCAAAACAATTGGTGGAGTGGTTGGTCGAGGAGGCGAAGCAATTGGTGGAATGTTGGGATGAGGCGGTAAAGCCATAGGTGGAATGCTCGGAGGAGGCGGTGAAGTTGGTGGAATGTTGGGACGAGGTGGAGGAGGTGGTGGGGGTGGAATTGTAGTTGGAGGAGGAGGAGGTGGTGGTCTAAGAGGAAATATTGGTGGTAGTATTAAAGGTGGAAGAATAGGTAGAGGAGGGAGACGGATAGGTGGTATTGGTATAAGAGGAGGGAGACGGATAGGTGGTATTGGAGGGAGACGGATAGGTGGTATTGGTACAAGAGGAGGGAGACGGATAGGTGGTATTGGTACAAGAGGAGGGAGACGGATAGGTGGTATTTGTAACGGGAGAGTAAGCAATTGTGAATTGACATGTTGGTCGGACGAGGAAGGTGTTTGTTGGAGACGGCGGGCTGCTTCACTCGCCTCAATATTCAAACAACATAAACTCACAAAAACACCAAACAACACAACTAAGGTCTTGTAGGAAGCCATCACATAATCAAGCTTCCTTCACTCACA

Coding sequence (CDS)

ATGGTGGAGCCGTCCCTGAAATACAAGGATGACAATGGTGAAGCAATGGGTGGATTGTTGGGGCGAGTCATTGGTGGAATGCTAGGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGTGAAGTCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATAATAGCGCGAGGGGGTGAAGCTATTGGTGGACTGCTTGGACGAGGGGGTGATGCTATCGGTGGAACGATTGGACGAGGTGGTGAGGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGAGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACTATCGGACTAGGTGGTGAGGCCATGGGTGGAATGTTCGGATGA

Protein sequence

MVEPSLKYKDDNGEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGEMMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGMLGRGGDAVGGTIGLGGEAMGGMFG
Homology
[Close]
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match: A0A0A0KHS4_CUCSA (Pollen coat oleosin-glycine rich protein OS=Cucumis sativus GN=Csa_6G416850 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.5e-28
Identity = 86/152 (56.58%), Postives = 113/152 (74.34%), Query Frame = 1 

Query: 13  GEAMGGLLGR---VIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGK-VG 72
           GEA+G + GR    +G +LGRGGE +G  +GRGG+ IG + GRGG  +G +LGRGG+ +G
Sbjct: 27  GEALGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLG 86

Query: 73  EMMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGK-VGEMMGR 132
           E MGRGG+AIG I  RGG A+G +LGRGG+ +G T+GRGG+AIG + GRGG+ +GE++GR
Sbjct: 87  ETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGR 146

Query: 133 GGEAIGGMLGRGGDAVGGTIGLGGEAMGGMFG 160
           GGE +G  +GRGG A+G   G GG AMG M G
Sbjct: 147 GGETLGETMGRGGKAIGEIFGRGGRAMGEMLG 178

[Close]
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match: A0A091DH58_FUKDA (Long palate, lung and nasal epithelium carcinoma-associated protein 4 OS=Fukomys damarensis GN=H920_07116 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-15
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKV-GEMM 72
           GE  G LLG   GG+LG  G + GG++G GG   GG+LG GG   GG+LG GG   G ++
Sbjct: 498 GEGGGDLLG---GGLLGGSGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLL 557

Query: 73  GRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKV-GEMMGRGGE 132
           G GG + GG++  GG + GGLLG GG + GG +G GG + GG+LG GG   G ++G GG 
Sbjct: 558 GDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGS 617

Query: 133 AIGGMLGRGGDAVGGTIGLGGEAMGG 157
           + GG+LG GG + GG +G GG  +GG
Sbjct: 618 SHGGLLGDGGSSGGGLLGGGGGLLGG 640

[Close]
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match: A0A078F3D8_BRANA (BnaC01g30760D protein OS=Brassica napus GN=BnaC01g30760D PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10
Identity = 75/145 (51.72%), Postives = 100/145 (68.97%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGEMMG 72
           G   GG  G+  GG +G+GG A GG IG+GG  +GG +G+GG V GG +G+GG VG  +G
Sbjct: 117 GAGAGGGFGK--GGGIGKGGGA-GGGIGKGGG-LGGGIGKGGGV-GGGIGKGGGVGGGIG 176

Query: 73  RGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGEMMGRGGEAI 132
           +GG  IGG I +GG  +GG  G+GG  IGG IG+GG  +GG +G+GG+VG  +G+GG  I
Sbjct: 177 KGG-GIGGGIGKGG-GVGGGYGKGG-GIGGGIGKGG-GVGGGIGKGGEVGGGIGKGG-GI 236

Query: 133 GGMLGRGGDAVGGTIGLGGEAMGGM 158
           GG +G+GG  VGG+IG GG   GG+
Sbjct: 237 GGGIGKGG-GVGGSIGKGGGVGGGI 250

[Close]
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match: M4E4M1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-09
Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGEMMG 72
           G   GG +G   GG +G+GG  +GG IG+GG V GG +G+GG  IGG +G+GG  G   G
Sbjct: 127 GIGKGGGVGGGAGGGIGKGG-GLGGGIGKGGGV-GGGIGKGGG-IGGGIGKGGGFGGGYG 186

Query: 73  RGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGEMMGRGGEAI 132
           +GG  IGG I +G   +GG +G+GG+ +GG IG+GG  IGG +G+GG VG  +G+GG  +
Sbjct: 187 KGG-GIGGGIGKG-RGVGGGIGKGGE-VGGGIGKGG-GIGGGIGKGGGVGGGIGKGG-GV 246

Query: 133 GGMLGRGGDAVGGTIGLGGEAMGGM 158
           GG  G+GG  VGG IG GG   GG+
Sbjct: 247 GGGFGKGG-GVGGGIGKGGGIGGGI 262

[Close]
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match: E6V457_VARPE (Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5091 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-09
Identity = 63/160 (39.38%), Postives = 97/160 (60.62%), Query Frame = 1 

Query: 12  NGEAMGGLLGR--VIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGE 71
           +G  +GG+LG   ++GG+LG  G  +GG++G GG ++GG+LG  G ++G ++G  G VG 
Sbjct: 704 DGGLLGGVLGDDGLLGGVLGGEGGLLGGVLGEGG-IVGGLLGGDGGLLGVVIGENGIVGG 763

Query: 72  MMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGR--------GGEA--IGGMLGRGG 131
           ++G  G  +GG++   G  +GGLLG  G  +GG +G         GG+   +GG+LG  G
Sbjct: 764 LLGGDGGLLGGVLGEDG-IVGGLLGGDGGLLGGVLGEDGIVGGLLGGDGGLLGGVLGENG 823

Query: 132 KVGEMMGRGGEAIGGMLGRGGDAVGGTIGLGGEAMGGMFG 160
            VG ++G  G  +GG+LG  G  VGG +G  G  +GG+ G
Sbjct: 824 IVGGLLGGDGGLLGGVLGENG-IVGGLLGGDGGLLGGVLG 860

[Close]
BLAST of Cp4.1LG15g02670.1 vs. TAIR10
Match: AT3G23450.1 (AT3G23450.1 unknown protein)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 76/145 (52.41%), Postives = 97/145 (66.90%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGEMMG 72
           G  +GG  G  +GG  G+GG  IGG IG+GG V GG +G+GG  IGG +G+GG VG  +G
Sbjct: 109 GGGVGGGHGGGVGGGFGKGG-GIGGGIGKGGGV-GGGIGKGGG-IGGGIGKGGGVGGGIG 168

Query: 73  RGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGEMMGRGGEAI 132
           +GG  IGG I +GG  IGG +G+GG  IGG IG+GG  IGG +G+GG VG   G+GG  +
Sbjct: 169 KGG-GIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGGGVGGGFGKGG-GV 228

Query: 133 GGMLGRGGDAVGGTIGLGGEAMGGM 158
           GG +G+GG  VGG  G GG   GG+
Sbjct: 229 GGGIGKGG-GVGGGFGKGGGVGGGI 244

[Close]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match: gi|778722303|ref|XP_011658456.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 6.5e-28
Identity = 86/152 (56.58%), Postives = 113/152 (74.34%), Query Frame = 1 

Query: 13  GEAMGGLLGR---VIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGK-VG 72
           GEA+G + GR    +G +LGRGGE +G  +GRGG+ IG + GRGG  +G +LGRGG+ +G
Sbjct: 27  GEALGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLG 86

Query: 73  EMMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGK-VGEMMGR 132
           E MGRGG+AIG I  RGG A+G +LGRGG+ +G T+GRGG+AIG + GRGG+ +GE++GR
Sbjct: 87  ETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGR 146

Query: 133 GGEAIGGMLGRGGDAVGGTIGLGGEAMGGMFG 160
           GGE +G  +GRGG A+G   G GG AMG M G
Sbjct: 147 GGETLGETMGRGGKAIGEIFGRGGRAMGEMLG 178

[Close]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match: gi|1011258286|ref|WP_062177236.1| (MULTISPECIES: hypothetical protein [Bacillales])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 73/147 (49.66%), Postives = 95/147 (64.63%), Query Frame = 1 

Query: 15  AMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGK-VGEMMGR 74
           A  G  G+ +GGM G GG+ +GG  G GG+ +GGM G GG+ +GG  G GG+ VG M G 
Sbjct: 512 AQPGYGGQPVGGMPGYGGQPVGGNPGYGGQPVGGMPGYGGQPVGGNPGYGGQPVGGMPGY 571

Query: 75  GGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGK-VGEMMGRGGEAI 134
           GG+ +GG    GG+ +GG+ G GG  +GG  G GG+ +GGM G GG+ VG M G GG+ +
Sbjct: 572 GGQPVGGNPGYGGQPVGGMPGYGGQPVGGMPGYGGQPVGGMPGYGGQPVGGMPGYGGQPV 631

Query: 135 GGMLGRGGDAVGGTIGLGGEAMGGMFG 160
           GGM G GG  VGG  G GG+ +GGM G
Sbjct: 632 GGMPGYGGQPVGGMPGYGGQPVGGMPG 658

[Close]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match: gi|676277326|gb|KFO31474.1| (Long palate, lung and nasal epithelium carcinoma-associated protein 4 [Fukomys damarensis])

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKV-GEMM 72
           GE  G LLG   GG+LG  G + GG++G GG   GG+LG GG   GG+LG GG   G ++
Sbjct: 498 GEGGGDLLG---GGLLGGSGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLL 557

Query: 73  GRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKV-GEMMGRGGE 132
           G GG + GG++  GG + GGLLG GG + GG +G GG + GG+LG GG   G ++G GG 
Sbjct: 558 GDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGS 617

Query: 133 AIGGMLGRGGDAVGGTIGLGGEAMGG 157
           + GG+LG GG + GG +G GG  +GG
Sbjct: 618 SHGGLLGDGGSSGGGLLGGGGGLLGG 640

[Close]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match: gi|923734780|ref|XP_013669370.1| (PREDICTED: glycine-rich cell wall structural protein-like [Brassica napus])

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10
Identity = 76/159 (47.80%), Postives = 100/159 (62.89%), Query Frame = 1 

Query: 13  GEAMGGLLGRVIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEV---------IGGMLGR 72
           G   GG LG  +GG +G+GG  +GG IG+GG  IGG +G+GG V         IGG +G+
Sbjct: 139 GIGKGGGLGGGVGGGIGKGG-GVGGGIGKGGG-IGGGIGKGGGVGGGYGKGGGIGGGIGK 198

Query: 73  GGKVGEMMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGE 132
           GG VG  +G+GG  +GG I +GG  IGG +G+GG  +GG IG+GG  +GG  G+GG VG 
Sbjct: 199 GGGVGGGIGKGG-GVGGGIGKGG-GIGGGIGKGG-GVGGGIGKGG-GVGGGFGKGGGVGG 258

Query: 133 MMGRGGEAIGGMLGRG-----GDAVGGTIGLGGEAMGGM 158
            +G+GG  IGG +G+G     G  VGG IG GG   GG+
Sbjct: 259 GIGKGG-GIGGGIGKGGGIGKGGGVGGGIGKGGGVGGGI 290

[Close]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match: gi|543576397|ref|WP_021024874.1| (hypothetical protein, partial [Comamonas sp. B-9])

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10
Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 1 

Query: 12   NGEAMGGLLGR--VIGGMLGRGGEAIGGMIGRGGEVIGGMLGRGGEVIGGMLGRGGKVGE 71
            NG  +GGL G   ++GG+ G GG  +GG++G  G ++GG+ G GG ++GG+ G GG +G 
Sbjct: 1242 NGGLLGGLTGEGGLLGGLTGEGG-LLGGVVGGNGGLLGGLTGEGG-LLGGLTGEGGLLGG 1301

Query: 72   MMGRGGEAIGGIIARGGEAIGGLLGRGGDAIGGTIGRGGEAIGGMLGRGGKVGEMMGRGG 131
            ++G  G  +GG+   GG  +GGL G GG  +GG +G  G  +GG+ G GG +G + G GG
Sbjct: 1302 VVGGNGGLLGGLTGEGG-LLGGLTGEGG-LLGGVVGGNGGLLGGLTGEGGLLGGLTGEGG 1361

Query: 132  EAIGGMLGRGGDAVGGTIGLGGEAMGGMFG 160
              +GG++G  G  +GG  G GG  +GG+ G
Sbjct: 1362 -LLGGVVGGNGGLLGGLTGEGG-LLGGLTG 1385

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g02670.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG15g02670.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHS4_CUCSA4.5e-2856.58Pollen coat oleosin-glycine rich protein OS=Cucumis sativus GN=Csa_6G416850 PE=4... [more]
A0A091DH58_FUKDA2.0e-1548.63Long palate, lung and nasal epithelium carcinoma-associated protein 4 OS=Fukomys... [more]
A0A078F3D8_BRANA1.9e-1051.72BnaC01g30760D protein OS=Brassica napus GN=BnaC01g30760D PE=4 SV=1[more]
M4E4M1_BRARP1.6e-0949.66Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
E6V457_VARPE2.1e-0939.38Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5091 PE=4 ... [more]
BLAST of Cp4.1LG15g02670.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23450.14.4e-1452.41 unknown protein[more]
BLAST of Cp4.1LG15g02670.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722303|ref|XP_011658456.1|6.5e-2856.58PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus][more]
gi|1011258286|ref|WP_062177236.1|4.7e-1849.66MULTISPECIES: hypothetical protein [Bacillales][more]
gi|676277326|gb|KFO31474.1|2.8e-1548.63Long palate, lung and nasal epithelium carcinoma-associated protein 4 [Fukomys d... [more]
gi|923734780|ref|XP_013669370.1|2.1e-1047.80PREDICTED: glycine-rich cell wall structural protein-like [Brassica napus][more]
gi|543576397|ref|WP_021024874.1|2.1e-1042.00hypothetical protein, partial [Comamonas sp. B-9][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG15g02670Cp4.1LG15g02670gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG15g02670.1:cds:001Cp4.1LG15g02670.1:cds:001CDS
Cp4.1LG15g02670.1:cds:002Cp4.1LG15g02670.1:cds:002CDS
Cp4.1LG15g02670.1:cds:003Cp4.1LG15g02670.1:cds:003CDS
Cp4.1LG15g02670.1:cds:004Cp4.1LG15g02670.1:cds:004CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG15g02670.1:three_prime_utr:001Cp4.1LG15g02670.1:three_prime_utr:001three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG15g02670.1Cp4.1LG15g02670.1-proteinpolypeptide