Cp4.1LG14g08070.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCCATCACTTTCTATAGATAAAAATGAAAACGTAAATCTGAGTCACAACATAAAACGCTGATAGGCATTATAAAAGGCATACAATTCTAACAAAACAATTATTTCGAGGGAAAAAGAATTGGAGGCCTTCAATTTGTTACCTTTACTTTTCCCATTCTTTCTTTTTTCTCTTTTGCAAACACCCACCTTGGTAGCCAAGAAGGTTAGTCAATGATCACTTATAAAGCCTTTTTAATGTTTATATCAACTGGGTTTTAGACATTGAAACGTTTTATTTATGTTGTGCAGTCTTATATTGTTTACTTGAGATCACCTTCACATGGCTTGAATCCCTCTGTAGTTGATCTCCAACTTGCAACACAAATCCACTACAATCTACTTGGATCTATGTTAGGAAGGTGAAGCTTTTACGTCTAAATCATGTAATGCAAATTTGTTGAACTCTCGCTCTTCATTTACAATCTTATGTTTTTGTTTCCAAGTACAGTCATGAAGCAGCTAAGAAAGCAATCTTTTACTTGCATAAGATATAGCTAGTAAAATGATTGAATCATTTCTATGACTCATTTTATTTGATAATGATTTTCTCTCTCCCTAAAACCATATTTGTTTGTTCCTAATTTATTGGGTTTCATATTTTTATAGAAACATTCTTGTCTGTGGGAAGCATTGATTAGAAGCTTAATTTTGAGAAGTCAGCCTAGTTTTTCTATTTTAATAGTATGGTGTTTTCTCTTTTTTTTCTTTTTTAGAGCATCGTGATGTGCTATCAGTTATGAAAATAAAGGATTAAAACGGTATACAATCATGGAACTTTCTTGGAGTTGGGAATGATAGTGGAATTCCTTCAAACTTACTTTCGAATCTTTCAAGATTTGGTGAATCTACAATCATTGGCAACATTGACATAGGTTGGACTTGTTTCCCTCTCATAAGTTCTTGGACATTCGGCAACTTTTGTATTAATTTAGGTACTTCTTCTTATTGTGATTCGGATCAATACAGGTGTTTGGCTAGAATCAAAGAGCTTTAGTGATAAAGGATATGAACCTATCCCAACAAGATGGAAGGGAAGTTGTAAACGTGGCTCCAACTTTCATTGCAACAGGTCCCTATGA ATGTCTCCATCACTTTCTATAGATAAAAATGAAAACTCTTATATTGTTTACTTGAGATCACCTTCACATGGCTTGAATCCCTCTGTAGTTGATCTCCAACTTGCAACACAAATCCACTACAATCTACTTGGATCTATGTTAGGAAGGATTAAAACGGTATACAATCATGGAACTTTCTTGGAGTTGGGAATGATAGTGGAATTCCTTCAAACTTACTTTCGAATCTTTCAAGATTTGGTACTTCTTCTTATTGTGATTCGGATCAATACAGGTGTTTGGCTAGAATCAAAGAGCTTTAGTGATAAAGGATATGAACCTATCCCAACAAGATGGAAGGGAAGTTGTAAACGTGGCTCCAACTTTCATTGCAACAGGTCCCTATGA ATGTCTCCATCACTTTCTATAGATAAAAATGAAAACTCTTATATTGTTTACTTGAGATCACCTTCACATGGCTTGAATCCCTCTGTAGTTGATCTCCAACTTGCAACACAAATCCACTACAATCTACTTGGATCTATGTTAGGAAGGATTAAAACGGTATACAATCATGGAACTTTCTTGGAGTTGGGAATGATAGTGGAATTCCTTCAAACTTACTTTCGAATCTTTCAAGATTTGGTACTTCTTCTTATTGTGATTCGGATCAATACAGGTGTTTGGCTAGAATCAAAGAGCTTTAGTGATAAAGGATATGAACCTATCCCAACAAGATGGAAGGGAAGTTGTAAACGTGGCTCCAACTTTCATTGCAACAGGTCCCTATGA MSPSLSIDKNENSYIVYLRSPSHGLNPSVVDLQLATQIHYNLLGSMLGRIKTVYNHGTFLELGMIVEFLQTYFRIFQDLVLLLIVIRINTGVWLESKSFSDKGYEPIPTRWKGSCKRGSNFHCNRSL
BLAST of Cp4.1LG14g08070.1 vs. Swiss-Prot
Match: SBT3A_ARATH (Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana GN=SBT3.10 PE=3 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. Swiss-Prot
Match: SBT4C_ARATH (Subtilisin-like protease SBT4.12 OS=Arabidopsis thaliana GN=SBT4.12 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09 Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. Swiss-Prot
Match: AIR3_ARATH (Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.1e-09 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. Swiss-Prot
Match: SBT42_ARATH (Subtilisin-like protease SBT4.2 OS=Arabidopsis thaliana GN=SBT4.2 PE=3 SV=3) HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. Swiss-Prot
Match: SBT48_ARATH (Subtilisin-like protease SBT4.8 OS=Arabidopsis thaliana GN=SBT4.8 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.2e-09 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TrEMBL
Match: W9QR32_9ROSA (Subtilisin-like protease OS=Morus notabilis GN=L484_023738 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.6e-13 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TrEMBL
Match: V4UAB3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018333mg PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11 Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TrEMBL
Match: A0A151SRG4_CAJCA (Subtilisin-like protease (Fragment) OS=Cajanus cajan GN=KK1_003678 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.6e-10 Identity = 50/160 (31.25%), Postives = 70/160 (43.75%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TrEMBL
Match: A0A0A0L2R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045120 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.9e-10 Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TrEMBL
Match: A0A0A0L241_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045090 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-09 Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TAIR10
Match: AT5G59090.1 (AT5G59090.1 subtilase 4.12) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-10 Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TAIR10
Match: AT4G10530.1 (AT4G10530.1 Subtilase family protein) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-10 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TAIR10
Match: AT2G04160.1 (AT2G04160.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TAIR10
Match: AT4G15040.1 (AT4G15040.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 61.2 bits (147), Expect = 5.2e-10 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. TAIR10
Match: AT5G58830.1 (AT5G58830.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 61.2 bits (147), Expect = 5.2e-10 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. NCBI nr
Match: gi|703084012|ref|XP_010092360.1| (Subtilisin-like protease [Morus notabilis]) HSP 1 Score: 82.0 bits (201), Expect = 8.1e-13 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. NCBI nr
Match: gi|567911103|ref|XP_006447865.1| (hypothetical protein CICLE_v10018333mg [Citrus clementina]) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11 Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. NCBI nr
Match: gi|659096606|ref|XP_008449186.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491136 [Cucumis melo]) HSP 1 Score: 75.1 bits (183), Expect = 9.9e-11 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. NCBI nr
Match: gi|778688353|ref|XP_011652727.1| (PREDICTED: subtilisin-like protease SBT5.3 [Cucumis sativus]) HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10 Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 1
BLAST of Cp4.1LG14g08070.1 vs. NCBI nr
Match: gi|659096254|ref|XP_008448997.1| (PREDICTED: subtilisin-like protease [Cucumis melo]) HSP 1 Score: 72.0 bits (175), Expect = 8.4e-10 Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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