Cp4.1LG14g00250.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g00250.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Fiber protein Fb34
Location	Cp4.1LG14 : 4501822 .. 4504223 (-)
Sequence length	969

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTATCTGTTGCTTTTTGCAAAGAATTTTAAAGACAACCTGCTGCTGCTGCTACTAGACTTAGTCCTCTGTTCTTAAAGAGAGGGCAGAATAGAAATTAGAAAAAGGCTTTCAAGAAAGAAACAGATCTGCGAAGCTCTTAATCTGCTCAACAATGGCGTCAAAGCTACTCCTTCTCTTGGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGTAAAGCTCTTACTCTTTTCCCCTCTCTCTTTACTTCGCTTTATTGTTGCATATTTCAGTGAAAGTTTGTGGCTTTACTTCAAATCTTGGTGATTTATGGCCTTTCTCTTCTGGGTTTGCTTAGTTCATTTGGTTCTTAATATGGGTTCTGAATACAGAGACGGAATATGAACATTGGGTTTTTAGGTTTAAGGGATTTAGAACGTTCCTGCTAGTTTTCTCAGTGACCAAACAAAGATAAGTGTTTTGTTTCAGCTGGAAAAGTGCTCAGATCTGCTTTTATTGGTCTTTTTAAACACCAATTGTCCTGTTCACACAGAAACTTCTTGTGAATGATAGCACATCATTTCAATGCAGTTCTTTGTGTTCTTTATTTGTGTTGTTTATGTTCTTCTAGATTGAGGGTGTGTTGTTGTGCGATTCTAATAGGGTTCTGTTATTGGGATTGTGATATACCATAACAAATCTTGAAAAACTACTCTTTTCATGTAAGGATGCTTAACCGTGGCACCGATATTATTCGGGGCGGAGAAGGAGATTCTATGAACCTTCTTCGACGTGAGATTTGCAAATCTTGAAAGACTACTCTTTCGTTTAAGGATGCTTAATCACTAGGTTGTGATTGCTTTAAGGAGAGATTTTGTAAGAGCCTAACCCCACCCACTCGTAACAGATATTGTCCTTTTTGGACTTTCTCTTTTGGCTTCCCCTCAACGTTTTAAAATGCGTTGAAAGAATACTTCGTTTAGAGATCTCACAATCCACCCCGTTTAGAGCCCAACATCCTCGTTGGCACTCGTTCCCTTCTCTAATCAATGTAGGACCACCAATCCACCCCCTTCCGAGCCTAGCGTTCTTGCTAGTACACCGCCTCATGTCCACCCCTGTTTGAGTCTCAGCCTCCTTGTTGGCACATCACCCCTTGTCTGAGCTTCCCTTCAAAGTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCACACCCTTATAAACAATGTTTCGTTCTCACATATCTAATGGATCTCAAAGACAAATCTAAAGATGAATTCTTCTTCAAAGGCAGATCTGATATTCTGAGGTCCCACATTGTTTGTTTTTGACCCACAAGCCATTACTTTCCCCTCACTTTCTTTACCTGCTCCCAACAAGAACAGCCAAACTCATAACTCAGTGGGGAACTGTTTGAAAGGTCAATAATTGTCTTCTTTTTGTAAAAGATTTAGTTGAAGTACTTTGTATTCTTATCTGTTCTACGAAGGACAAGATATTTACCTCTAACAACTTTGAATGTTCTAAAGAGTTCATAATTATTTTAATCCCATTTGATTTGAAATGATTTCACAGGCAAAGATAGTTGAAGACTCTGATGCCAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGGCGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGTAAGTCGAGTCGAGCAAACTAACATGTTACGACATCAAATTTTTGTACAATAGTATGATATTGTCTACTGATATGAAATAATCTGTTTCAGGGTGTTCTTTTTAATCGCCGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCTTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACACAACAAAGACACTGGCATCGGCATGAGTTCGTACCGATGAGATTCGTTGTAAATGTCGTTTTTTCGATCACGTTCTGTTTCGATATAGTTTTGCCTTACATTACACGGTTTGTAGCTTTCAATCCAGTTTATAGAAGCCTATAGGTTGTCGTCTTTCTCTACCGTTCTATGTTTCAACGAAACTCCGTGGTCGATGTCTTCGTGTCGGTATCAGAAAAACATTGCTAGAAAATGAAGATTTATGTTGCAGGATAATGTTTCTTATTCTTATTCTTTCATCCTTTTGTTTATTTTCCCAG

mRNA sequence

CAATTATCTGTTGCTTTTTGCAAAGAATTTTAAAGACAACCTGCTGCTGCTGCTACTAGACTTAGTCCTCTGTTCTTAAAGAGAGGGCAGAATAGAAATTAGAAAAAGGCTTTCAAGAAAGAAACAGATCTGCGAAGCTCTTAATCTGCTCAACAATGGCGTCAAAGCTACTCCTTCTCTTGGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGCAAAGATAGTTGAAGACTCTGATGCCAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGGCGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGGTGTTCTTTTTAATCGCCGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCTTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACACAACAAAGACACTGGCATCGGCATGAGTTCGTACCGATGAGATTCGTTGTAAATGTCGTTTTTTCGATCACGTTCTGTTTCGATATAGTTTTGCCTTACATTACACGGTTTGTAGCTTTCAATCCAGTTTATAGAAGCCTATAGGTTGTCGTCTTTCTCTACCGTTCTATGTTTCAACGAAACTCCGTGGTCGATGTCTTCGTGTCGGTATCAGAAAAACATTGCTAGAAAATGAAGATTTATGTTGCAGGATAATGTTTCTTATTCTTATTCTTTCATCCTTTTGTTTATTTTCCCAG

Coding sequence (CDS)

ATGGCGTCAAAGCTACTCCTTCTCTTGGTCTTTGTGTTTGATGTCATCGCTTTTGGGTTAGCCATTGCAGCTGAGCAAAGGAGAAGCACTGCAAAGATAGTTGAAGACTCTGATGCCAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGCTTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGCCAGATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGTAAGCCTCTGAGTCCGGGCGGTTCGAGGGCTTGGGCCATCATTCTCTTCATAACTTGCTGGGTGTTCTTTTTAATCGCCGAGATTTGCGTACTCGCGGGTTCTGCTAGGAATGCATACCACACCAAGTACAGAACATTGCTTACTGATACTCCTCCCTCTTGTCAAATGCTGAGAAGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTAACTTCCATTGTTTCGCAGTCTTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTCCAATCACACAACAAAGACACTGGCATCGGCATGAGTTCGTACCGATGA

Protein sequence

MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFLFLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGMSSYR

Homology

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL
Match: A0A0A0L5B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104340 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.6e-88
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL  VFVFDVIAFGLAIAAEQRRS AKIVED  AK NYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQILIMVASRCFCCGKPLSPGGSRAWA++L ITCWVFFLIAEIC+LAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLLITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRTLLT+TPPSCQMLRRGVFAAGAAFIF TSIVSQ YYVCYSRARESFQS++KDTGIGM
Sbjct: 121 KYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGIGM 180

Query: 181 SSYR 185
           S+Y+
Sbjct: 181 STYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL
Match: V4ULR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009639mg PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76
Identity = 137/184 (74.46%), Postives = 163/184 (88.59%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+  VFVFD+IAFGLA+AAEQRRSTA I  DS+   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQ+LIM+ASRCFCCGKPLSPGGSRAWA+ILFI CWVFF IAE+C+LAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF+F T+IVS+ YY+CYS+ARESFQ +  +TG+GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 SSYR 185
            +Y+
Sbjct: 181 GTYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL
Match: A0A067GFD0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030041mg PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-76
Identity = 137/184 (74.46%), Postives = 163/184 (88.59%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+  VFVFD+IAFGLA+AAEQRRSTA I  DS+   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQ+LIM+ASRCFCCGKPLSPGGSRAWA+ILFI CWVFF IAE+C+LAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF+F T+IVS+ YY+CYS+ARESFQ +  +TG+GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 SSYR 185
            +Y+
Sbjct: 181 GTYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL
Match: A0A061F673_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031372 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.7e-75
Identity = 138/185 (74.59%), Postives = 164/185 (88.65%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL+ VF+ D+IAFGLAIAAEQRRSTAKIV+DS+   NYCVYDSDI+TG GVGAFL
Sbjct: 1   MASKLLLIAVFILDLIAFGLAIAAEQRRSTAKIVQDSEVNYNYCVYDSDIATGYGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FLMASQ LIMVASRCFCCGK L+P GSRAWA++LFI CW+FFLIAEIC+LAGS RNAYHT
Sbjct: 61  FLMASQALIMVASRCFCCGKALNPSGSRAWAVVLFIVCWLFFLIAEICLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARE-SFQSHNKDTGIG 180
           KYRT+ ++ PPSC+ +R+GVF AGAAFIFLTSIV++ YY+CYS ARE SFQ++  +TG+G
Sbjct: 121 KYRTIFSEQPPSCETVRKGVFGAGAAFIFLTSIVNKFYYICYSSARENSFQAYGGETGVG 180

Query: 181 MSSYR 185
           M +Y+
Sbjct: 181 MGTYK 185

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL
Match: B9T1A3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0163950 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.9e-74
Identity = 133/184 (72.28%), Postives = 159/184 (86.41%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL+ VF+FD+IAFGLA+AAEQRRSTA I +D++   NYCVYDSDI+TG GVGAFL
Sbjct: 1   MASKLLLITVFIFDLIAFGLAVAAEQRRSTAVIKQDAEVNYNYCVYDSDIATGYGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FLM SQ++IMVAS+CFCCGK L+PGGSRAWA+ILFITCWVFF IAE+C+LAGS RNAYHT
Sbjct: 61  FLMLSQVIIMVASQCFCCGKALNPGGSRAWAVILFITCWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRT+ +D PP CQMLR+GVF AGAAF   T IVSQ YYVCYS+AR+ FQ + ++TG+ M
Sbjct: 121 KYRTVFSDNPPDCQMLRKGVFGAGAAFSLFTLIVSQFYYVCYSKARDGFQPYGRETGVPM 180

Query: 181 SSYR 185
            +Y+
Sbjct: 181 GTYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 244.2 bits (622), Expect = 6.3e-65
Identity = 117/168 (69.64%), Postives = 141/168 (83.93%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASK++  +VFVF++IAFGLA+AAEQRRSTA++V+D++ + NYCVYDSD +TG GVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           F +ASQILIM+ SRCFCCGKPL PGGSRA A+ILFI  W+FFLIAEIC+LAGS  NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARES 169
           KYRT+  D PP CQ LR+GVFAAGA+F+F  +IVSQ YY  Y  A E+
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEA 168

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 124/182 (68.13%), Postives = 148/182 (81.32%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MAS LLLLLVFVFD+IAFGLA+AAEQRR+T +I  +S    +YCVYD DI+TGLGVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
            L+ASQ+LIMVASRC CCG+ L+P GSR+WAI LFIT WVFF IA++C+LAGS RNAYHT
Sbjct: 61  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYR    +T PSC+ LR+GVF AGAAFI LT IVS+ YYV  SRA++ FQ  ++D GI M
Sbjct: 121 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD-FQP-SRDPGIRM 179

Query: 181 SS 183
           SS
Sbjct: 181 SS 179

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218))

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-61
Identity = 112/172 (65.12%), Postives = 141/172 (81.98%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKL++++VF+ D+IA GLAIAAEQRRS  K+  D D + +YCVY +DI+T  G GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
            L  SQ+LIM ASRCFCCGK L+PGGSRA AIILF+ CWVFFLIAE+C+LA S RNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTL-LTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQS 172
           +YR +   + PPSC+++R+GVFAAGAAF   T+IVSQ YYVCYSRAR+++Q+
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAYQN 172

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 225.3 bits (573), Expect = 3.0e-59
Identity = 107/172 (62.21%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKL++++VF+ D+IA GLAIAAEQRRS  K+V D + +  +C Y SDI+T  G GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
            L  SQ++IMVASRCFCCGK L PGGSRA  I+LF+ CWVFFLIAE+C+LAGS RNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTLLT-DTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQS 172
            YR +   + PPSC+++R+GVFAAGA+F   T+IVSQ YY+ YSRAR+ +Q+
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQT 172

[Close]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 179.5 bits (454), Expect = 1.9e-45
Identity = 87/185 (47.03%), Postives = 127/185 (68.65%), Query Frame = 1


Query: 2   ASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFLF 61
           AS L+ +LV    ++AFG +IAAE+RRS  K ++D      +CVYDSD++TG GVGAFLF
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHTK 121
           L++S+ L+M  ++C C G+PL+PG  RAW+II FI+ W+ FL+AE CV+AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSH---NKDTGI 181
           Y   L+    SC  LR+G+F AGA FI  T +++  YY+ ++++  S  +H      + I
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSSSNI 185

Query: 182 GMSSY 184
           GM+ Y
Sbjct: 186 GMAGY 187

[Close]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr
Match: gi|659102701|ref|XP_008452269.1| (PREDICTED: uncharacterized protein LOC103493341 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-90
Identity = 168/184 (91.30%), Postives = 178/184 (96.74%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL  VFVFDVIAFGLAIAAEQRRS AKIVED+ AKRNYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTGAKRNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQILIMVASRCFCCGKPLSPGGSRAWA++LFITCWVFFLIAEIC+LAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLFITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRTLLTDTPPSCQMLRRGVFAAGAAFIF TSIVSQ YYVCYSRARESFQS++KDTG+GM
Sbjct: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGVGM 180

Query: 181 SSYR 185
           S+Y+
Sbjct: 181 STYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr
Match: gi|449431826|ref|XP_004133701.1| (PREDICTED: uncharacterized protein LOC101203051 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.2e-88
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL  VFVFDVIAFGLAIAAEQRRS AKIVED  AK NYCVYDSDISTGLGVGAFL
Sbjct: 1   MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQILIMVASRCFCCGKPLSPGGSRAWA++L ITCWVFFLIAEIC+LAGSARNAYHT
Sbjct: 61  FLLASQILIMVASRCFCCGKPLSPGGSRAWAVVLLITCWVFFLIAEICLLAGSARNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRTLLT+TPPSCQMLRRGVFAAGAAFIF TSIVSQ YYVCYSRARESFQS++KDTGIGM
Sbjct: 121 KYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYSKDTGIGM 180

Query: 181 SSYR 185
           S+Y+
Sbjct: 181 STYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr
Match: gi|567919848|ref|XP_006451930.1| (hypothetical protein CICLE_v10009639mg [Citrus clementina])

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 137/184 (74.46%), Postives = 163/184 (88.59%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL+  VFVFD+IAFGLA+AAEQRRSTA I  DS+   NYC+YDSDISTG+GVGAFL
Sbjct: 1   MASKLLIATVFVFDLIAFGLAVAAEQRRSTATIQTDSEKNYNYCIYDSDISTGMGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ASQ+LIM+ASRCFCCGKPLSPGGSRAWA+ILFI CWVFF IAE+C+LAGS RNAYHT
Sbjct: 61  FLLASQVLIMLASRCFCCGKPLSPGGSRAWAVILFIICWVFFFIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KYRT+  + PPSCQ +R+GVFAAGAAF+F T+IVS+ YY+CYS+ARESFQ +  +TG+GM
Sbjct: 121 KYRTIWGENPPSCQTVRKGVFAAGAAFVFFTAIVSEFYYICYSKARESFQPYGGETGVGM 180

Query: 181 SSYR 185
            +Y+
Sbjct: 181 GTYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr
Match: gi|1009161802|ref|XP_015899090.1| (PREDICTED: uncharacterized protein LOC107432456 [Ziziphus jujuba])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 137/184 (74.46%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLL++ V +FD+IAFGLA+ AEQRRSTA+IV+DSDA  NYCVYDSDISTGLGVGA L
Sbjct: 1   MASKLLMITVLIFDIIAFGLAVGAEQRRSTARIVQDSDANYNYCVYDSDISTGLGVGALL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FL+ SQ+LIM  SRCFCCGKPLSPGGSRAWA+ILFITCWVFFLIAE+C+LAGS RNAYHT
Sbjct: 61  FLLVSQVLIMGVSRCFCCGKPLSPGGSRAWAVILFITCWVFFLIAEVCLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARESFQSHNKDTGIGM 180
           KY+   +DTP  CQ LR+GVF AGAAFI L +IVSQ YYVCYS ARE FQS+  +TG+G+
Sbjct: 121 KYKPFYSDTPQHCQTLRKGVFGAGAAFILLNAIVSQFYYVCYSSAREKFQSYGAETGVGL 180

Query: 181 SSYR 185
             Y+
Sbjct: 181 GPYK 184

[Close]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr
Match: gi|590608717|ref|XP_007021340.1| (Uncharacterized protein TCM_031372 [Theobroma cacao])

HSP 1 Score: 288.5 bits (737), Expect = 8.2e-75
Identity = 138/185 (74.59%), Postives = 164/185 (88.65%), Query Frame = 1


Query: 1   MASKLLLLLVFVFDVIAFGLAIAAEQRRSTAKIVEDSDAKRNYCVYDSDISTGLGVGAFL 60
           MASKLLL+ VF+ D+IAFGLAIAAEQRRSTAKIV+DS+   NYCVYDSDI+TG GVGAFL
Sbjct: 1   MASKLLLIAVFILDLIAFGLAIAAEQRRSTAKIVQDSEVNYNYCVYDSDIATGYGVGAFL 60

Query: 61  FLMASQILIMVASRCFCCGKPLSPGGSRAWAIILFITCWVFFLIAEICVLAGSARNAYHT 120
           FLMASQ LIMVASRCFCCGK L+P GSRAWA++LFI CW+FFLIAEIC+LAGS RNAYHT
Sbjct: 61  FLMASQALIMVASRCFCCGKALNPSGSRAWAVVLFIVCWLFFLIAEICLLAGSVRNAYHT 120

Query: 121 KYRTLLTDTPPSCQMLRRGVFAAGAAFIFLTSIVSQSYYVCYSRARE-SFQSHNKDTGIG 180
           KYRT+ ++ PPSC+ +R+GVF AGAAFIFLTSIV++ YY+CYS ARE SFQ++  +TG+G
Sbjct: 121 KYRTIFSEQPPSCETVRKGVFGAGAAFIFLTSIVNKFYYICYSSARENSFQAYGGETGVG 180

Query: 181 MSSYR 185
           M +Y+
Sbjct: 181 MGTYK 185

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g00250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g00250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5B8_CUCSA	1.6e-88	90.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104340 PE=4 SV=1	[more]
V4ULR8_9ROSI	1.0e-76	74.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009639mg PE=4 SV=1	[more]
A0A067GFD0_CITSI	1.0e-76	74.46	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030041mg PE=4 SV=1	[more]
A0A061F673_THECC	5.7e-75	74.59	Uncharacterized protein OS=Theobroma cacao GN=TCM_031372 PE=4 SV=1	[more]
B9T1A3_RICCO	4.9e-74	72.28	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0163950 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g00250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27435.1	6.3e-65	69.64	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.0e-62	68.13	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	1.1e-61	65.12	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	3.0e-59	62.21	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	1.9e-45	47.03	Protein of unknown function (DUF1218)	[more]

BLAST of Cp4.1LG14g00250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102701\|ref\|XP_008452269.1\|	2.4e-90	91.30	PREDICTED: uncharacterized protein LOC103493341 [Cucumis melo]	[more]
gi\|449431826\|ref\|XP_004133701.1\|	2.2e-88	90.22	PREDICTED: uncharacterized protein LOC101203051 [Cucumis sativus]	[more]
gi\|567919848\|ref\|XP_006451930.1\|	1.5e-76	74.46	hypothetical protein CICLE_v10009639mg [Citrus clementina]	[more]
gi\|1009161802\|ref\|XP_015899090.1\|	2.2e-75	74.46	PREDICTED: uncharacterized protein LOC107432456 [Ziziphus jujuba]	[more]
gi\|590608717\|ref\|XP_007021340.1\|	8.2e-75	74.59	Uncharacterized protein TCM_031372 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG14g00250	Cp4.1LG14g00250	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00250.1:five_prime_utr:001	Cp4.1LG14g00250.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00250.1:cds:001	Cp4.1LG14g00250.1:cds:001	CDS
Cp4.1LG14g00250.1:cds:002	Cp4.1LG14g00250.1:cds:002	CDS
Cp4.1LG14g00250.1:cds:003	Cp4.1LG14g00250.1:cds:003	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00250.1:three_prime_utr:001	Cp4.1LG14g00250.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g00250.1	Cp4.1LG14g00250.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 58..152 score: 1.3
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 1..184 score: 4.0E
None	No IPR available	PANTHER	PTHR31769:SF16	SUBFAMILY NOT NAMED	coord: 1..184 score: 4.0E