Cp4.1LG13g07050.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g07050.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Location	Cp4.1LG13 : 8804397 .. 8806797 (-)
Sequence length	829

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATCCCTTAAAAAAAAATGGGTCAGAGCTTCTTTCTCTCTATAAACCCTCCAATTACGATACCTTCCCTTCCAAAATTCTTAACTCTCTCTGCAAAAAAAGCTTCTTCTTCACTTCATCAATGGAGGTTTGTATACTTCCCTTCGTCTTCGTGTTTGACTTTTTCTTCACGTTTTTTTTGACTCGTTACCATGGTTTTGGCTGCACAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGGTAACTAATTAACTCATTTACTATTATTTATTTATTATTATTATTATTATTATTATTATTATTATTATTTGTTGAGTGAATCATGTTTAGAGGACGCCTTTTTCCAGCCTTAAGCATGCTTTGCCTTTTTATTTTTTCACTTTCACTTATTATAAATTAAAAAGGAAAATAATAATAATAATAATAAAGTTAACTGCGTGATCGCCACGTGACTTTACTTGATTCCTAAAGAAAAGTTGTCCCCCTAATTATTATTATTATTATTTTTAAAAGTTTTTGTTCAGATATTCATTATTATAGTAATTTCAAATATATATATATATATATATATCCAAACATTTTAAATAATATATTTTTATTTACTCAATTTTTTAATTTTTTTTAATTTATTCAAATAAAATTTTTAAGTTTTGTTAAAAATTTAATTTTAAGTTTTTATTTTTAAGCAAAATTTGAAAAAAAAAAGAGAAAAAAAAAGTAAAGTTTTTGTTTTTTAAAATGTAGATTTAAAATAAAAGTTAAGCATTTTCATTTGGGAGTGAGGGAAAGTTAATGCTAAAGTGACAGGCGGGTGAGGGAAATGGGGAAAAAAAACAGTGAACATTAACGAAATTTTTAGAAAAAATGATAAAAATTGAGTAAATAAAAATATATTATTTAAAATGTTTGGATATATATATATATATATATATTTGAAATTACNGTGGAAAATTAATGGTAAAGTGACAAGTGGTGATGTAATATTATTATTATTATTTTTTTTTTTTAATTGTGGAATTATAAAATGGTGAGTGGGGTGACGGATGAATGTGCAGAGAAAGCGTGACAGACATGGGAAGCAAGAAATGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTGTACAAAATCTCTCCCAATCTCTGCGCCAAGCCCAAAAAGGTCTTTTCACTTTAATGTTTTTTTCTCGCTCGTTCCGGCACCCGTAGATATAAATAATAGAGGTGTTCGTGGGTTGAGTCAGGTCAGGTTGAGACATATTTTAGACTCAATGTTATTGTTCGGGCACTCGTAGATATAAATAATAAAGTTGTTTGTGGGTTAGGTTGGGTCAAGTTGATACATTTTTTAGACTCGACATTATGGTTTGGACACTCATAGATATAAACAACAAAGGTATTTGTGGGTTGGTTGGGTCAAGTTGAGACATTTTCTAGTCTCAACGTTATTGTTCGAGCACTCGTAGATATAAATAACAAAGGTGTTTGTGGGTTGGGTTGGGTCAGGTTGAGACATTTTTTGAGACATTTTCTAGTCTCAACGTTATTGTTCAAGCACTCGTAGATATAAATAACAAACGTGTTTGTGGGTTGGGTTGGGTCAGGTTGAGACATTTTTTAGACTCAACGTTATCGTTCGGGCACTTGTTGATATAAATAATAAAAGTGTTTATGGGTTGGGTTAGGTCAGGTTGAGATATTTTTTAGACTCAACGTTATCGTTCGGGTTGTATTAAATAATGACCCAACCCGACTTATCCATAAATTTTTTTAAGTATGGGTTGATCAGGTTTTCTCGGAACTAGGTTATAATGTGAATTGGTTTGAAATTTTGCAGAAGAGAGGGTTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGAAGACGACGAGGAAGAGAGAGCGGAATGGTCAACCGGGACGAGGAATGTATATTTGAAAAAAGAAAAAAAAAACCGTACATAATGTTTTGGGATGTTTGGTTATTAGATTAATGTGATGTTTCTATGTTTTATATATATATTTTGAAGAAAAATAGATTTTTTTTTTTTAATTTTTAATTTTGGGAGTGTGTTTTTTAATTAGAGGAGAGAGGGGAGAGCTATTTGTACAAGGTTCTTCCATTGGTTGCTATGCTATGACCTATCAATGAATGTCTTTGTGCTTCTTTTCTCACTCTAAATAA

mRNA sequence

TGGATCCCTTAAAAAAAAATGGGTCAGAGCTTCTTTCTCTCTATAAACCCTCCAATTACGATACCTTCCCTTCCAAAATTCTTAACTCTCTCTGCAAAAAAAGCTTCTTCTTCACTTCATCAATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAATGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTGTACAAAATCTCTCCCAATCTCTGCGCCAAGCCCAAAAAGAAGAGAGGGTTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGAAGACGACGAGGAAGAGAGAGCGGAATGGTCAACCGGGACGAGGAATGTATATTTGAAAAAAGAAAAAAAAAACCGTACATAATGTTTTGGGATGTTTGGTTATTAGATTAATGTGATGTTTCTATGTTTTATATATATATTTTGAAGAAAAATAGATTTTTTTTTTTTAATTTTTAATTTTGGGAGTGTGTTTTTTAATTAGAGGAGAGAGGGGAGAGCTATTTGTACAAGGTTCTTCCATTGGTTGCTATGCTATGACCTATCAATGAATGTCTTTGTGCTTCTTTTCTCACTCTAAATAA

Coding sequence (CDS)

ATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAATGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTGTACAAAATCTCTCCCAATCTCTGCGCCAAGCCCAAAAAGAAGAGAGGGTTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGA

Protein sequence

MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRHGKQEMQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNLCAKPKKKRGLSYITSCFVPTCLI

Homology

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL
Match: A0A0A0KA54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-52
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEMQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-LCAKPKK 120
           VVPRPRRKRDR GKQ  ++KW  SP     H    KPMPKPVDEDLYKISP+ L AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 135
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL
Match: A0A0B0MSN2_GOSAR (Atp-dependent rna helicase dbp7 OS=Gossypium arboreum GN=F383_27938 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.0e-38
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+  +Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRQSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NLC-AKPKKKRGLSYITSCFVPTCLI 135
           +L  AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL
Match: A0A0D2PA14_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G159300 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.1e-38
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+  +Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRKSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NLC-AKPKKKRGLSYITSCFVPTCLI 135
           +L  AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL
Match: A0A0B0MMT2_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_01439 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37
Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y+R+ +P FG+W+WN+ LPFTQCFE +R  G     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDY-YRRSHVPAFGSWDWNNDLPFTQCFETARPTGMLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKWTESPPQVTLHP-PKPMPKPVDEDLYKISPNLC- 120
           TPAMIVVPR R K    H K+  +Q+W  S  +    P P+P PKPVDEDLYKISP+L  
Sbjct: 61  TPAMIVVPRRRTKVGQTHSKEGKKQRWEVSDGKEAPEPRPRPTPKPVDEDLYKISPDLLY 120

Query: 121 AKPKKKRGLSYITSCFVPTCL 134
           AKPKKKRGLS+ +SC +PTC+
Sbjct: 121 AKPKKKRGLSFFSSCLLPTCV 140

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL
Match: A0A061DMX9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002679 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-37
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+D+ Y+R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDF-YRRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKWTESPPQVTLHP---PKPMPKPVDEDLYKISPNL 120
           TPAMIVVPR R K R  H K+  +Q W  S  +    P   P+P PKPVDEDLYKISP L
Sbjct: 61  TPAMIVVPRRRTKVRQSHVKEGKKQNWEVSDVKEPASPTPLPRPTPKPVDEDLYKISPEL 120

Query: 121 C-AKPKKKRGLSYITSCFVPTCLI 135
             AKPKKKRGL + +SC VPTC +
Sbjct: 121 LYAKPKKKRGLGFFSSCLVPTCAL 143

[Close]

BLAST of Cp4.1LG13g07050.1 vs. TAIR10
Match: AT5G48500.1 (AT5G48500.1 unknown protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-24
Identity = 68/163 (41.72%), Postives = 88/163 (53.99%), Query Frame = 1


Query: 3   DYDY------QRNFIPTFGNWEWNDHLPFTQCFEAS--------RIAGYPDVRDLYVAGD 62
           DY+Y      +R  +P FG+W+WND +PFTQCFE +          A YP  RDLY+AGD
Sbjct: 2   DYEYGGGEYCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGD 61

Query: 63  LYQN-DVVTPAMIVVPR--------PRRKRDRHGKQEMQQKWTESPPQVTLHPPKPM--- 122
           LY N  +V PA+I+VPR        P  K+    KQ+   K         +  P P+   
Sbjct: 62  LYDNHHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPVSCPTPVVKR 121

Query: 123 ----PKPVDEDLYKISPNLCA-KPKKKR---GLSYITSCFVPT 132
               PKPVDEDLYK+SP L + K K+KR   G   I+ CF+PT
Sbjct: 122 RMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLPT 164

[Close]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr
Match: gi|778727195|ref|XP_004150335.2| (PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 7.1e-52
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEMQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPN-LCAKPKK 120
           VVPRPRRKRDR GKQ  ++KW  SP     H    KPMPKPVDEDLYKISP+ L AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 135
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr
Match: gi|728819725|gb|KHG03357.1| (atp-dependent rna helicase dbp7 [Gossypium arboreum])

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+  +Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRQSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NLC-AKPKKKRGLSYITSCFVPTCLI 135
           +L  AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr
Match: gi|823189703|ref|XP_012490918.1| (PREDICTED: uncharacterized protein LOC105803339 [Gossypium raimondii])

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 87/146 (59.59%), Postives = 106/146 (72.60%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY NDVV
Sbjct: 1   MDDY-YTRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYDNDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKW-----TESPPQVTLHPPKPMPKPVDEDLYKISP 120
           TPAMIVVPR R+K R  + K+  +Q W      ESP    LH  +P PKPVDEDLYKISP
Sbjct: 61  TPAMIVVPRRRKKGRKSNDKEGKRQNWEINDVKESPSPTPLH--RPTPKPVDEDLYKISP 120

Query: 121 NLC-AKPKKKRGLSYITSCFVPTCLI 135
           +L  AKP+KKRGLS+  SC VPTC++
Sbjct: 121 HLLYAKPRKKRGLSFFASCMVPTCVL 143

[Close]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr
Match: gi|728814943|gb|KHG01682.1| (RPM1-interacting 4 -like protein [Gossypium arboreum])

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-37
Identity = 84/141 (59.57%), Postives = 104/141 (73.76%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+DY Y+R+ +P FG+W+WN+ LPFTQCFE +R  G     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDY-YRRSHVPAFGSWDWNNDLPFTQCFETARPTGMLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKWTESPPQVTLHP-PKPMPKPVDEDLYKISPNLC- 120
           TPAMIVVPR R K    H K+  +Q+W  S  +    P P+P PKPVDEDLYKISP+L  
Sbjct: 61  TPAMIVVPRRRTKVGQTHSKEGKKQRWEVSDGKEAPEPRPRPTPKPVDEDLYKISPDLLY 120

Query: 121 AKPKKKRGLSYITSCFVPTCL 134
           AKPKKKRGLS+ +SC +PTC+
Sbjct: 121 AKPKKKRGLSFFSSCLLPTCV 140

[Close]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr
Match: gi|590713307|ref|XP_007049605.1| (Uncharacterized protein TCM_002679 [Theobroma cacao])

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-37
Identity = 85/144 (59.03%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAG-----YPDVRDLYVAGDLYQNDVV 60
           M+D+ Y+R+ +P FG+W+WN+ LPFTQCFE++R AG     Y + RDLYVAGDLY+NDVV
Sbjct: 1   MDDF-YRRSHVPAFGSWDWNNDLPFTQCFESARQAGLLRYSYSEDRDLYVAGDLYENDVV 60

Query: 61  TPAMIVVPRPRRK-RDRHGKQEMQQKWTESPPQVTLHP---PKPMPKPVDEDLYKISPNL 120
           TPAMIVVPR R K R  H K+  +Q W  S  +    P   P+P PKPVDEDLYKISP L
Sbjct: 61  TPAMIVVPRRRTKVRQSHVKEGKKQNWEVSDVKEPASPTPLPRPTPKPVDEDLYKISPEL 120

Query: 121 C-AKPKKKRGLSYITSCFVPTCLI 135
             AKPKKKRGL + +SC VPTC +
Sbjct: 121 LYAKPKKKRGLGFFSSCLVPTCAL 143

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g07050.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g07050.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA54_CUCSA	5.0e-52	75.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372860 PE=4 SV=1	[more]
A0A0B0MSN2_GOSAR	7.0e-38	59.59	Atp-dependent rna helicase dbp7 OS=Gossypium arboreum GN=F383_27938 PE=4 SV=1	[more]
A0A0D2PA14_GOSRA	9.1e-38	59.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G159300 PE=4 SV=1	[more]
A0A0B0MMT2_GOSAR	1.6e-37	59.57	RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_01439 PE=4 SV=1	[more]
A0A061DMX9_THECC	2.0e-37	59.03	Uncharacterized protein OS=Theobroma cacao GN=TCM_002679 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g07050.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48500.1	1.0e-24	41.72	unknown protein	[more]

BLAST of Cp4.1LG13g07050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727195\|ref\|XP_004150335.2\|	7.1e-52	75.91	PREDICTED: uncharacterized protein LOC101219200 [Cucumis sativus]	[more]
gi\|728819725\|gb\|KHG03357.1\|	1.0e-37	59.59	atp-dependent rna helicase dbp7 [Gossypium arboreum]	[more]
gi\|823189703\|ref\|XP_012490918.1\|	1.3e-37	59.59	PREDICTED: uncharacterized protein LOC105803339 [Gossypium raimondii]	[more]
gi\|728814943\|gb\|KHG01682.1\|	2.2e-37	59.57	RPM1-interacting 4 -like protein [Gossypium arboreum]	[more]
gi\|590713307\|ref\|XP_007049605.1\|	2.9e-37	59.03	Uncharacterized protein TCM_002679 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG13g07050	Cp4.1LG13g07050	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG13g07050.1	Cp4.1LG13g07050.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG13g07050.1:five_prime_utr:001	Cp4.1LG13g07050.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG13g07050.1:cds:001	Cp4.1LG13g07050.1:cds:001	CDS
Cp4.1LG13g07050.1:cds:002	Cp4.1LG13g07050.1:cds:002	CDS
Cp4.1LG13g07050.1:cds:003	Cp4.1LG13g07050.1:cds:003	CDS
Cp4.1LG13g07050.1:cds:004	Cp4.1LG13g07050.1:cds:004	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG13g07050.1:three_prime_utr:001	Cp4.1LG13g07050.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33699	FAMILY NOT NAMED	coord: 1..134 score: 3.7
None	No IPR available	PANTHER	PTHR33699:SF2	SUBFAMILY NOT NAMED	coord: 1..134 score: 3.7