Cp4.1LG12g09780.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTAAATTTGAAGTTAAGAATTGGTCTTTTCCGTGAGTGTTCTCTTCTGATTGTCTCGAGGCTTTGCTTCTTCACCCACAGTCGCCGGCGAACACAGAGATGCAGCTTCTTACCGGTGTCAAGAATCCTGCTACAATGGTGACGATGGCGACGGCGATCATTTTCATTGCGTCAATGCCGTTAGCTTGGTCAAAGGAGCAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGTCATACTTTAGCTGAATATATTAAAGATCAAGGTGATGCGTTTGATTCACTGGATTTTTATTTTTTATTTTTTTTATACGCATTCTTGATTCGGCTTTGAATTTATATCTTTGTTATTACATTTCTTCCATTTTCGTGACTATTTCTGGTGAATTCGCAGCATATTAATGATTTTGTTCGCTTATTTTCTTGATCTTCTGCGTTCTTTTGAATGATTGATTGTTCATCTTGTGTTGGGTTTGATTACGGATCTTTTTTTGCTTGATTTAGACTTGGGATTTCCGGATTACTTTGTTGTAGTCTGGATGTATTACCGTTGGCTTTAATTTCGATATTTGAATTTCTTAGTATTGTGGATAGAGTTTGCTAATGTCATTTCTTATTTTATCCGAAGATACATCGATGATGAGTTGAGAGACAGACTTAGGGTCCTACTTCTGTGATTGTCCGAGAATTTATTAGGGAAGAAGATGGCTTCTGAAATTCTGATGTAATAATTCATATTTTTTTCAAGTTTTATCTCAAGAGATTACAAAATTGCGTCCAGAGATTGAATTGTGGGAAGAAAGAAGTCCTCAACATTTTGAAGCGATAGATCATCTTGTTCCTTCTGTGATTTGTTGATTATGTTTTTCAGAAATTATGTATCATGTCTTTCTGATAAGTCGTGATTTGAATGCAATTAGTGATTGTTAGGGTTATTCCTTTTGGTTACTTTCTTTTTATTTTTTGCAATGACCTTTTTCCACACCCTTTTTGATTGCTAAGCCCCAGCATAATTTTAGAGGTCGAACGGGGTTTTGGACCTTTTTCCACACCCTTTTTTAGCTTTGTTTTCACATAGATCTATTTGTTTTAGTTAAATTAAAGACATTCTTTCTTGTGAATATTGATTTCAAGTGCATTTATTATGTGCCATCTGATCACAACTCTAAAAGATTAGGAGTTTGAACAGTCTCCAAAGTGGCCATATTTGCTAAAAGTGAAGAGGCTTATAAAGTTGGTTAGGGAAATTGTTTTCCACGCATTAGACTGTAAGGGCACTTTATAAAATCCTACATGCTCCCTGTCTCTTCTCCCAATCATAGTTCTTGAAAATAGTTTTAAAAACAATAGCAGTAACCAGTCTTTTCAAAAATAGCACCCGAACATCACTTTTCGGAAAAAAAAGCAAAAGAAAAGAAAATGCTATGGTAGTTGGCTTGGCTGGAGGAGATTCTTTTACCCCTTCCCCCTTCCCTGAGTTCCATGATTTTTAAACGTTTATGCAACTGCATGTGGAATCAAGAAATGGGTTGCAAGATGTGGAGTTAATTTAACATATTGTCTTTTAGTTTTGCAGTTTAAGAATTTGTAAGTTTACAAATGAGTTTTACGTGAACATGTCAAAAGATGTAATTTCTAATGATGAATTCAGTGATTGTTGCACTGGCAATTCTGGCAACGCTGGATTTGTGGATTGCTAACGACTTCAAATAGTTTTTATCCGAAATCCAGAAGAAAAAAGAACTGATAGTTCAAAATCTGCAACCGTTTTGTATCAGCTTATGCAATAATTTTGAAATTTATTGTTTTTTATATTACACGCTATCCTCATGCCCAGATTTGTACTGCAGAATTAGTGACGGATTGTTTGAAATGCTGCACGGAGGATTCTGATGATGCCACGAGTAAGGTATGCAAAATGTTATAAATTTGCTGATTTCTGGAAGGGGAATCAATGAAATCCTGTTTCTCCCCCAAAAATTGCAGTAACTTACCATTCCATTTGTGATTAATATATCACACTTATAAACTGAATGCTTGTTCGGCCCTGTGGTAGAGATGTCAATCGGAAACACATTAGTTTAACATATTACGTAGGACTAACAATTTCTGCCTTTATGTAATTATCACAACTATGGTCCAAATAAGGTTTCAGTGGACAAGGGAAACTAAGTCGGTTTAAGAAAAAGGTGATTCAAGGGATGTGCAACGCATTTATCAATGCATATCACAACCCTGTTGAAGTGAGGGATTATGATCAAGTGCAACCTATGAATTCCCCTTATTTTGTAAATTACCATAGGTACATATCCATAGTATTTTAATTTTCTTACATCAGTGTTTCAAACTTCTGGACAGATATTCTACATTCGTTATGAGACAATTACTTATTCCAAGAGGCTAGTAGTTTGTTTGCCTTTTCCACTTAGCCCTATACCCTTCCGTGGTGTTACAGGGACTACTGCTCTATGATAAAGGAGATCTTGATGAACTCTCCTTTTCGAGATAAAGGAAGATTGTTGTCCTAGGCTTGCTCCTTTGATATCTTGTGAGATTTGTGACTTGAGGGGAATAGTAGGATCTTCAGAGGGGCTGACAGGTTCATTACTCGGAGTTTTTGTAACTATTAGTTTAGTCTTATACTTTTTCAATGGTGTTCATTCTCGTAGGTTGTTAAAAGCTCCTTTTGGGAGCTTGTTTTTTGTATGCCCCATATATTATTTTATTTCTCTCGATGAAAGTTATTTTGTTTAAAAAAAAAAAAAAACACTTAAAAGTGCAAGAAACGTCCTTGAAAATTCTGCAATTACACTCGCACCAAAGATTCCAAAAAAAAAAAAAAAAATACAAGGATATGGAGGAGTAATAAATAGAAATAATAAGAAAAAAAGAAAAAGGAAAAGAAAAGAAAAACTAGGTTGATGGCTAGCCATAAAGTCTTGTTAAACCTTGAAAGGGATGTCCCAGGGAGAAATGCCTCGTATGCATCCAGAATTTTTATCCTCTCAAACTCCCCAGTTCAGTACTCTGTTGGTTGTATTTCATAAGTATATGCATGTGGGTGTCTTTTCATTTATTTTGACAAAGGATGAAAGCCAAGTTCATTGACTGCAGATAACTTATTCTGGTGCCATGCTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAATGTTCAATATACCTTCAACTCTCCACCGAAGCTTATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATTAGGTAACTTCTGAAGCGCCAGGACTTTCCCATCTTATACTGTCTGCATCACACATATAATATATCAGAGCAAAACCAAGTGAATGAAGAATGTTTGAGGAGGTTAATATAGTGTATAGAACGATATAGATTTTGTAATGACCGTTGATAATCTCGATATCGCACATAAGGTGAAAATTCTTTTTTGAACATTTTTCCCCCTTTTTTTTTTGTAGGATTGATAATTGGAAACGCGAACATATTTTGCAGTTCCTGAAAGAGAAGGTTAAGCAGCGATCTTCAGCAATTTAAGGTTCTCACTTTTTTCCCTTCTTAATCTCTGTAAAAAACTTAATGCAGAATTTGAACGAAACTATTATCAGCCAAAAAAGTTGAGGTGAGTGAACACTAATTTTGTCAATGTCAAGGATAGTTGGAAAGATAGCTGATTTCCTCGTCTAAATCTTTTACTGCTTAAAAATCCTTTAGAAGTTTGACTGATCTTTTATAAAATTTTATACACATTGTTGTTTACACGCTTTATCATCTAACAACGTTGTATCTAGCCCGATCATTTTTT ACTCTAAATTTGAAGTTAAGAATTGGTCTTTTCCGTGAGTGTTCTCTTCTGATTGTCTCGAGGCTTTGCTTCTTCACCCACAGTCGCCGGCGAACACAGAGATGCAGCTTCTTACCGGTGTCAAGAATCCTGCTACAATGGTGACGATGGCGACGGCGATCATTTTCATTGCGTCAATGCCGTTAGCTTGGTCAAAGGAGCAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGTCATACTTTAGCTGAATATATTAAAGATCAAGAATTAGTGACGGATTGTTTGAAATGCTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCATGCTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAATGTTCAATATACCTTCAACTCTCCACCGAAGCTTATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATTAGGATTGATAATTGGAAACGCGAACATATTTTGCAGTTCCTGAAAGAGAAGGTTAAGCAGCGATCTTCAGCAATTTAAGGTTCTCACTTTTTTCCCTTCTTAATCTCTGTAAAAAACTTAATGCAGAATTTGAACGAAACTATTATCAGCCAAAAAAGTTGAGGTGAGTGAACACTAATTTTGTCAATGTCAAGGATAGTTGGAAAGATAGCTGATTTCCTCGTCTAAATCTTTTACTGCTTAAAAATCCTTTAGAAGTTTGACTGATCTTTTATAAAATTTTATACACATTGTTGTTTACACGCTTTATCATCTAACAACGTTGTATCTAGCCCGATCATTTTTT ATGCAGCTTCTTACCGGTGTCAAGAATCCTGCTACAATGGTGACGATGGCGACGGCGATCATTTTCATTGCGTCAATGCCGTTAGCTTGGTCAAAGGAGCAACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGTCATACTTTAGCTGAATATATTAAAGATCAAGAATTAGTGACGGATTGTTTGAAATGCTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCATGCTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAATGTTCAATATACCTTCAACTCTCCACCGAAGCTTATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATTAGGATTGATAATTGGAAACGCGAACATATTTTGCAGTTCCTGAAAGAGAAGGTTAAGCAGCGATCTTCAGCAATTTAA MQLLTGVKNPATMVTMATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKDQFPSVNVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLKEKVKQRSSAI
BLAST of Cp4.1LG12g09780.1 vs. Swiss-Prot
Match: SEP15_BOVIN (15 kDa selenoprotein OS=Bos taurus GN=SEP15 PE=2 SV=2) HSP 1 Score: 92.4 bits (228), Expect = 5.0e-18 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. Swiss-Prot
Match: SEP15_HUMAN (15 kDa selenoprotein OS=Homo sapiens GN=SEP15 PE=1 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 8.5e-18 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. Swiss-Prot
Match: SEP15_DANRE (15 kDa selenoprotein OS=Danio rerio GN=sep15 PE=2 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. Swiss-Prot
Match: SEP15_PIG (15 kDa selenoprotein OS=Sus scrofa GN=SEP15 PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-17 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. Swiss-Prot
Match: SEP15_RAT (15 kDa selenoprotein OS=Rattus norvegicus GN=Sep15 PE=1 SV=3) HSP 1 Score: 86.7 bits (213), Expect = 2.7e-16 Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TrEMBL
Match: A0A0A0KA30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087180 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.0e-78 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TrEMBL
Match: A0A067LJ32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05711 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.4e-67 Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TrEMBL
Match: B9IQU6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s12540g PE=4 SV=2) HSP 1 Score: 259.2 bits (661), Expect = 3.4e-66 Identity = 121/148 (81.76%), Postives = 137/148 (92.57%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TrEMBL
Match: D7T2E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00490 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.2e-65 Identity = 122/149 (81.88%), Postives = 139/149 (93.29%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TrEMBL
Match: V4U1J4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022516mg PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 1.9e-64 Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. TAIR10
Match: AT1G05720.1 (AT1G05720.1 selenoprotein family protein) HSP 1 Score: 245.0 bits (624), Expect = 3.4e-65 Identity = 111/158 (70.25%), Postives = 143/158 (90.51%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. NCBI nr
Match: gi|659120099|ref|XP_008460012.1| (PREDICTED: 15 kDa selenoprotein [Cucumis melo]) HSP 1 Score: 306.6 bits (784), Expect = 2.7e-80 Identity = 155/172 (90.12%), Postives = 160/172 (93.02%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. NCBI nr
Match: gi|449445674|ref|XP_004140597.1| (PREDICTED: 15 kDa selenoprotein [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 4.3e-78 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. NCBI nr
Match: gi|802554732|ref|XP_012065054.1| (PREDICTED: 15 kDa selenoprotein [Jatropha curcas]) HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67 Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. NCBI nr
Match: gi|743917732|ref|XP_011002858.1| (PREDICTED: 15 kDa selenoprotein-like [Populus euphratica]) HSP 1 Score: 259.2 bits (661), Expect = 4.9e-66 Identity = 121/148 (81.76%), Postives = 138/148 (93.24%), Query Frame = 1
BLAST of Cp4.1LG12g09780.1 vs. NCBI nr
Match: gi|566242499|ref|XP_002326051.2| (hypothetical protein POPTR_0019s12540g [Populus trichocarpa]) HSP 1 Score: 259.2 bits (661), Expect = 4.9e-66 Identity = 121/148 (81.76%), Postives = 137/148 (92.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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