Cp4.1LG12g09770.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g09770.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GRAS family transcription factor
Location	Cp4.1LG12 : 5328514 .. 5330470 (-)
Sequence length	1764

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTATTTTTTATAATTTATTTTTGGGTTCAAAAGGGTGCTCCTTCCATCAATCAAAATTGTGAAACATAGCCTTTTTTTAAATTTTTTATTTTCTCCATAAGAAATTATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAACCTTCTTCAACCAAAGCCATGATCATCATCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACCAGCCATTCCTCCGAGTACTCGCCCGAACAATCTCCGTCCGCTGCTGCTGCTGCTGCTGCTACTACTTTGGCCGCCACCGGAAAATGGTCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTAGCTTCCCCTTATGGTGACTCCGATCAGAAAATGGCTTCCTACTTCCTCCAAGCTCTCTTCTGCAAGGCCACTGAAACTGGCCTCACTTGCTATAAAACCCTTGTCGCCATCGCCGACAAGAATCATTCCTTCGACACTTCCCTCAAGCTCATCCTCAAATTCCAAGAGGTTTGTTCCAATTCGATTAGGTTAACATAAATTTAATATCTTGTTCGATTCTTCTTTTCATCGGTGAGTTATGTTATGATCAGGGGTTGAGTGAGAATTTGAACCTTCAAATTTAAAAGAAAAAGGTCGAATTTTTATGTCAAAAAATTTAAGTTAAGCTAATGGGTTATGGTAAATTTGAATTTTATGTCAGGCAAGTCCATGGACAACATTCGGGCACGTCGCATCGAACGGTGCGATTCTCGAAGCTCTCGAGGGAGAAACCAAGCTCCATATCATTGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACGCGCAATGATGACACTCCACATCTCAAGCTCACCGTGGTCACAACAACAACCATTGTTAAGTCTCTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGTTAATGGGAGTCCCGTTCGATTTTAACCCGATAACGAATCTCGAAAACTTAACCGACCTTACAAAAGAAGCACTCAAAGTAGAAGAAGATGAAGCCATTGCCATAAATTGCATTGGAGCTTTAAGAAGAGTGAGAATTGAAGAAAGAAACAATGTGATATCAATGTTGAAATCATTAAAGCCTCGAGTTTTAACAATTGTAGAGGAAGAAGCGGATTTCATTAGCTCAAAAAACAACTTCTTGAAGTGTTTTGAAGAATGTCTTCGATTCTACACTCTTTACTTTGACATGTTGGAAGATAGCTTTGTGACAACAAGCAATGAGAGATTGGTATTAGAAAGAGAATGTTCAAGAAGCATTGTGAGGCTTTTGGGGTGCGATGAAAGTGAAGAACAAATGGGGAGTGAGAGAAGAGAAAAAGGAAAACAATGGAGCAAAAGGCTGAAAGAATCAGCCTTTTCATTAGCTGAATTTAGTGAAGATGTATTGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGCTTCTGCGTCGAGCCACCATCACCACCACCACCACCGCCGCCGCCACCGGAGAAGTACACGAAAGAGACGACGATTCATGTGGAGTTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAGAGGAATATGTCATTTACTATTATAATACCACTCTATATTCATAAAGGAGTTCTTCATTTTGTATGAAAATTGTTATATATATGTCTAGATTTTGTATTCAAATTCTTAATTTCTTGGGGTGTTTTTTTAATGGTTTTGCTTGGTTCTTCTTTTTTGTTTATGGATGGACTTTGCTTAGTTTCATATGAGTAGCAACTTCATACATTGTATGATACCAATATCAAGCAATAGGAATATTCTATGGAGTTCATATATAGACATACATATAAATTTAA

mRNA sequence

TATTTATTTTTTATAATTTATTTTTGGGTTCAAAAGGGTGCTCCTTCCATCAATCAAAATTGTGAAACATAGCCTTTTTTTAAATTTTTTATTTTCTCCATAAGAAATTATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAACCTTCTTCAACCAAAGCCATGATCATCATCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACCAGCCATTCCTCCGAGTACTCGCCCGAACAATCTCCGTCCGCTGCTGCTGCTGCTGCTGCTACTACTTTGGCCGCCACCGGAAAATGGTCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTAGCTTCCCCTTATGGTGACTCCGATCAGAAAATGGCTTCCTACTTCCTCCAAGCTCTCTTCTGCAAGGCCACTGAAACTGGCCTCACTTGCTATAAAACCCTTGTCGCCATCGCCGACAAGAATCATTCCTTCGACACTTCCCTCAAGCTCATCCTCAAATTCCAAGAGGCAAGTCCATGGACAACATTCGGGCACGTCGCATCGAACGGTGCGATTCTCGAAGCTCTCGAGGGAGAAACCAAGCTCCATATCATTGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACGCGCAATGATGACACTCCACATCTCAAGCTCACCGTGGTCACAACAACAACCATTGTTAAGTCTCTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGTTAATGGGAGTCCCGTTCGATTTTAACCCGATAACGAATCTCGAAAACTTAACCGACCTTACAAAAGAAGCACTCAAAGTAGAAGAAGATGAAGCCATTGCCATAAATTGCATTGGAGCTTTAAGAAGAGTGAGAATTGAAGAAAGAAACAATGTGATATCAATGTTGAAATCATTAAAGCCTCGAGTTTTAACAATTGTAGAGGAAGAAGCGGATTTCATTAGCTCAAAAAACAACTTCTTGAAGTGTTTTGAAGAATGTCTTCGATTCTACACTCTTTACTTTGACATGTTGGAAGATAGCTTTGTGACAACAAGCAATGAGAGATTGGTATTAGAAAGAGAATGTTCAAGAAGCATTGTGAGGCTTTTGGGGTGCGATGAAAGTGAAGAACAAATGGGGAGTGAGAGAAGAGAAAAAGGAAAACAATGGAGCAAAAGGCTGAAAGAATCAGCCTTTTCATTAGCTGAATTTAGTGAAGATGTATTGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGCTTCTGCGTCGAGCCACCATCACCACCACCACCACCGCCGCCGCCACCGGAGAAGTACACGAAAGAGACGACGATTCATGTGGAGTTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAGAGGAATATGTCATTTACTATTATAATACCACTCTATATTCATAAAGGAGTTCTTCATTTTGTATGAAAATTGTTATATATATGTCTAGATTTTGTATTCAAATTCTTAATTTCTTGGGGTGTTTTTTTAATGGTTTTGCTTGGTTCTTCTTTTTTGTTTATGGATGGACTTTGCTTAGTTTCATATGAGTAGCAACTTCATACATTGTATGATACCAATATCAAGCAATAGGAATATTCTATGGAGTTCATATATAGACATACATATAAATTTAA

Coding sequence (CDS)

ATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAACCTTCTTCAACCAAAGCCATGATCATCATCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACCAGCCATTCCTCCGAGTACTCGCCCGAACAATCTCCGTCCGCTGCTGCTGCTGCTGCTGCTACTACTTTGGCCGCCACCGGAAAATGGTCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTAGCTTCCCCTTATGGTGACTCCGATCAGAAAATGGCTTCCTACTTCCTCCAAGCTCTCTTCTGCAAGGCCACTGAAACTGGCCTCACTTGCTATAAAACCCTTGTCGCCATCGCCGACAAGAATCATTCCTTCGACACTTCCCTCAAGCTCATCCTCAAATTCCAAGAGGCAAGTCCATGGACAACATTCGGGCACGTCGCATCGAACGGTGCGATTCTCGAAGCTCTCGAGGGAGAAACCAAGCTCCATATCATTGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACGCGCAATGATGACACTCCACATCTCAAGCTCACCGTGGTCACAACAACAACCATTGTTAAGTCTCTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGTTAATGGGAGTCCCGTTCGATTTTAACCCGATAACGAATCTCGAAAACTTAACCGACCTTACAAAAGAAGCACTCAAAGTAGAAGAAGATGAAGCCATTGCCATAAATTGCATTGGAGCTTTAAGAAGAGTGAGAATTGAAGAAAGAAACAATGTGATATCAATGTTGAAATCATTAAAGCCTCGAGTTTTAACAATTGTAGAGGAAGAAGCGGATTTCATTAGCTCAAAAAACAACTTCTTGAAGTGTTTTGAAGAATGTCTTCGATTCTACACTCTTTACTTTGACATGTTGGAAGATAGCTTTGTGACAACAAGCAATGAGAGATTGGTATTAGAAAGAGAATGTTCAAGAAGCATTGTGAGGCTTTTGGGGTGCGATGAAAGTGAAGAACAAATGGGGAGTGAGAGAAGAGAAAAAGGAAAACAATGGAGCAAAAGGCTGAAAGAATCAGCCTTTTCATTAGCTGAATTTAGTGAAGATGTATTGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGCTTCTGCGTCGAGCCACCATCACCACCACCACCACCGCCGCCGCCACCGGAGAAGTACACGAAAGAGACGACGATTCATGTGGAGTTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAG

Protein sequence

MDITFFTAKEAPTTFFNQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP

Homology

[Close]

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 9.8e-109
Identity = 218/487 (44.76%), Postives = 308/487 (63.24%), Query Frame = 1


Query: 17  NQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAATTLA--------------- 76
           + S  H+HH H +     S  +  ++Y P  S + ++ AAA  LA               
Sbjct: 66  SSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAF 125

Query: 77  ------------ATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAS 136
                       A  KW+ ++L E ARA S+KD+ +    LW LNEL+SPYGD++QK+AS
Sbjct: 126 SIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLAS 185

Query: 137 YFLQALFCKATETGLTCYKTLVAIA--DKNHSFDTSLKLILKFQEASPWTTFGHVASNGA 196
           YFLQALF + T +G  CY+T+V  A  +K  SF+++ K +LKFQE SPW TFGHVA+NGA
Sbjct: 186 YFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGA 245

Query: 197 ILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTT-------TIVK 256
           ILEA++GE K+HI+DIS+T CTQWPTLLE+LATR+DDTPHL+LT V          T   
Sbjct: 246 ILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASH 305

Query: 257 SLMKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRV- 316
            +MKEIG RMEKFARLMGVPF FN I ++ +L++     L V+ DE +AINC+GA+  + 
Sbjct: 306 RMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA 365

Query: 317 -RIEERNNVISMLKSLKPRVLTIVEEEADFISSK-----NNFLKCFEECLRFYTLYFDML 376
            R   R+ VIS  + L+PR++T+VEEEAD +  +     + FL+ F ECLR++ + F+  
Sbjct: 366 SRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESW 425

Query: 377 EDSFVTTSNERLVLERECSRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEF 436
           E+SF  TSNERL+LER   R+IV L+ C+ S+    +ERRE  ++WS+R++ S F    +
Sbjct: 426 EESFPRTSNERLMLERAAGRAIVDLVACEPSD---STERRETARKWSRRMRNSGFGAVGY 485

Query: 437 SEDVLDDVKALLKRYKPG-WALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVV 460
           S++V DDV+ALL+RYK G W+++                   +  D+ G++L W+++PVV
Sbjct: 486 SDEVADDVRALLRRYKEGVWSMV-------------------QCPDAAGIFLCWRDQPVV 530

[Close]

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 6.5e-105
Identity = 214/449 (47.66%), Postives = 285/449 (63.47%), Query Frame = 1


Query: 48  SPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKM 107
           S S A A A    +++G+W++ LL ECARA++ +DS ++   +WMLNELASPYGD DQK+
Sbjct: 169 SSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKL 228

Query: 108 ASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGA 167
           ASYFLQ LF + T +G    +TL   +D+N SFD++ +  LKFQE SPWT FGHVA+NGA
Sbjct: 229 ASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGA 288

Query: 168 ILEA-LEG------------------ETKLHIIDISNTLCTQWPTLLESLATR-NDDTPH 227
           ILE+ LE                    T+LHI+D+SNT CTQWPTLLE+LATR +DDTPH
Sbjct: 289 ILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPH 348

Query: 228 LKLTVVTTT----TIVKSLMKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVE 287
           L +T V  T       + +M+EIGQR+EKFARLMGVPF F  + +  +L DL   AL + 
Sbjct: 349 LSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLR 408

Query: 288 E---DEAIAINCIGALRRVRIEERNNVISMLKSLKPRVLTIVEEEADFISSKNN------ 347
           E     A+A+NC+ ALR V    R+  ++ L+ L+PRV+T+VEEEAD  + + +      
Sbjct: 409 EGGATAALAVNCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEAD 468

Query: 348 ----FLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVRLLGCDESEEQMGS 407
               F+K F E LRF++ Y D LE+SF  TSNERL LER   R+IV L+ C  S+    +
Sbjct: 469 TDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SA 528

Query: 408 ERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRATITTTTTAAATG 460
           ERRE    W++R++ + FS A FSEDV DDV++LL+RYK GW++      T     AA  
Sbjct: 529 ERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAA-- 588

[Close]

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 8.5e-105
Identity = 214/449 (47.66%), Postives = 285/449 (63.47%), Query Frame = 1


Query: 48  SPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKM 107
           S S A A A    +++G+W++ LL ECARA++ +DS ++   +WMLNELASPYGD DQK+
Sbjct: 169 SSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKL 228

Query: 108 ASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGA 167
           ASYFLQ LF + T +G    +TL   +D+N SFD++ +  LKFQE SPWT FGHVA+NGA
Sbjct: 229 ASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGA 288

Query: 168 ILEA-LEG------------------ETKLHIIDISNTLCTQWPTLLESLATR-NDDTPH 227
           ILE+ LE                    T+LHI+D+SNT CTQWPTLLE+LATR +DDTPH
Sbjct: 289 ILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPH 348

Query: 228 LKLTVVTTT----TIVKSLMKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVE 287
           L +T V  T       + +M+EIGQR+EKFARLMGVPF F  + +  +L DL   AL + 
Sbjct: 349 LSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLR 408

Query: 288 E---DEAIAINCIGALRRVRIEERNNVISMLKSLKPRVLTIVEEEADFISSKNN------ 347
           E     A+A+NC+ ALR V    R+  ++ L+ L+PRV+T+VEEEAD  + + +      
Sbjct: 409 EGGATAALAVNCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEAD 468

Query: 348 ----FLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVRLLGCDESEEQMGS 407
               F+K F E LRF++ Y D LE+SF  TSNERL LER   R+IV L+ C  S+    +
Sbjct: 469 TDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SA 528

Query: 408 ERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRATITTTTTAAATG 460
           ERRE    W++R++ + FS A FSEDV DDV++LL+RYK GW++      T     AA  
Sbjct: 529 ERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAA-- 588

[Close]

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot
Match: SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.3e-102
Identity = 215/468 (45.94%), Postives = 289/468 (61.75%), Query Frame = 1


Query: 30  NLDMQSSTSHSSEYSPEQSPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHF 89
           NLD  S  S S            A++ A      G+W+S LL ECAR+++ +DS ++   
Sbjct: 163 NLDFSSPASSSG--------GGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQL 222

Query: 90  LWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILK 149
           +WMLNELASPYGD +QK+ASYFLQ LF + T +G    +TL A +D+N SFD++ +  L+
Sbjct: 223 MWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTALR 282

Query: 150 FQEASPWTTFGHVASNGAILE-------ALEGET-KLHIIDISNTLCTQWPTLLESLATR 209
           FQE SPW++FGHVA+NGAILE       A   ET + HI+D+SNT CTQWPTLLE+LATR
Sbjct: 283 FQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATR 342

Query: 210 N-DDTPHLKLTVVTT------TTIVKSLMKEIGQRMEKFARLMGVPFDFNPITNLENLTD 269
           + D+TPHL +T V +      T  V+ +M+EIGQRMEKFARLMGVPF F  + +  +L +
Sbjct: 343 SADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAE 402

Query: 270 LTKEALKVEE---DEAIAINCIGALRRV---RIEERNNVISMLKSLKPRVLTIVEEEADF 329
           L  +AL + E     A+A+NC+ +LR V   R   R+   + L+ L PRV+T+VEEEAD 
Sbjct: 403 LDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADL 462

Query: 330 ISSKNN--------------FLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRS 389
           ++S  +              FLK F E LRF++ Y D LE+SF  TSNERL LER   R+
Sbjct: 463 VASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRA 522

Query: 390 IVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWAL 449
           IV L+ C  SE     ERRE    W++R++ + FS   FSEDV DDV++LL+RY+ GW++
Sbjct: 523 IVDLVSCPASESM---ERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSM 582

Query: 450 LRRATITTTTTAAATGEVHERDDDS---CGVYLTWKEEPVVWVSAWKP 460
               T                 DDS    GV+L WKE+P+VW SAW+P
Sbjct: 583 REAGT-----------------DDSAAGAGVFLAWKEQPLVWASAWRP 602

[Close]

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot
Match: SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2)

HSP 1 Score: 373.6 bits (958), Expect = 3.0e-102
Identity = 215/468 (45.94%), Postives = 289/468 (61.75%), Query Frame = 1


Query: 30  NLDMQSSTSHSSEYSPEQSPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHF 89
           NLD  S  S S            A++ A      G+W+S LL ECAR+++ +DS ++   
Sbjct: 163 NLDFSSPASSSG--------GGTASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQL 222

Query: 90  LWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILK 149
           +WMLNELASPYGD +QK+ASYFLQ LF + T +G    +TL A +D+N SFD++ +  L+
Sbjct: 223 MWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALR 282

Query: 150 FQEASPWTTFGHVASNGAILE-------ALEGET-KLHIIDISNTLCTQWPTLLESLATR 209
           FQE SPW++FGHVA+NGAILE       A   ET + HI+D+SNT CTQWPTLLE+LATR
Sbjct: 283 FQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATR 342

Query: 210 N-DDTPHLKLTVVTT------TTIVKSLMKEIGQRMEKFARLMGVPFDFNPITNLENLTD 269
           + D+TPHL +T V +      T  V+ +M+EIGQRMEKFARLMGVPF F  + +  +L +
Sbjct: 343 SADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAE 402

Query: 270 LTKEALKVEE---DEAIAINCIGALRRV---RIEERNNVISMLKSLKPRVLTIVEEEADF 329
           L  +AL + E     A+A+NC+ +LR V   R   R+   + L+ L PRV+T+VEEEAD 
Sbjct: 403 LDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADL 462

Query: 330 ISSKNN--------------FLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRS 389
           ++S  +              FLK F E LRF++ Y D LE+SF  TSNERL LER   R+
Sbjct: 463 VASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRA 522

Query: 390 IVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWAL 449
           IV L+ C  SE     ERRE    W++R++ + FS   FSEDV DDV++LL+RY+ GW++
Sbjct: 523 IVDLVSCPASESM---ERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSM 582

Query: 450 LRRATITTTTTAAATGEVHERDDDS---CGVYLTWKEEPVVWVSAWKP 460
               T                 DDS    GV+L WKE+P+VW SAW+P
Sbjct: 583 REAGT-----------------DDSAAGAGVFLAWKEQPLVWASAWRP 602

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL
Match: A0A0A0K966_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081510 PE=3 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 4.1e-223
Identity = 401/467 (85.87%), Postives = 428/467 (91.65%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHH-----LHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60
           MDITFFTAKEAPT+FFNQSHDH HH     LHFSNLDMQSSTSHSSEYSPE SPSAAAAA
Sbjct: 1   MDITFFTAKEAPTSFFNQSHDHRHHHQLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAAA 60

Query: 61  AATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
           A  T  ATGKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMA YFLQAL
Sbjct: 61  ATAT--ATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQAL 120

Query: 121 FCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FC+ATETGLTCYKTLVA+A+KNH+FD++L+LILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 121 FCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGE 180

Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
           TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTT+IVK LMKEIGQRMEKFAR
Sbjct: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFAR 240

Query: 241 LMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300
           LMGVPF+FNPITN+++LTDLT EALKVEE EAIAINCIGALRRV++EERNNVISMLKSLK
Sbjct: 241 LMGVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLK 300

Query: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360
           PRVLTIVEEEADFISSKN+FLKCFEECLRFYTLYF+MLE+SFV TSNERLVLERECSRSI
Sbjct: 301 PRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 360

Query: 361 VRLLGCDE---SEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGW 420
           VRLLGCD    SEE++GSERREKGKQW+KRLK++ FS A FSEDV+DDVKALLKRYKPGW
Sbjct: 361 VRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGW 420

Query: 421 ALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
           ALLR A      TAA   E    D +S G+YLTWKEEPVVWVSAWKP
Sbjct: 421 ALLRPA------TAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL
Match: A0A0A7DLK9_QUESU (GRAS family transcription factor SHR2 OS=Quercus suber PE=2 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 6.7e-165
Identity = 309/464 (66.59%), Postives = 359/464 (77.37%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHH----LHFSNLDMQSSTSHSSEYSPEQSPSAAAAAA 60
           MDIT FT +E+P  FF  +   +      +H +N    S TS S        PSA+    
Sbjct: 1   MDITLFTPEESP--FFQSTQQSNGQAAIDMHSNNQPQNSHTSTSRSSDSGVLPSAS---- 60

Query: 61  ATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120
                  GKW+S LLKECA+AISEKDS+KIH  LW+LNELASPYGD DQK+ASYFLQALF
Sbjct: 61  -------GKWASRLLKECAQAISEKDSSKIHQLLWLLNELASPYGDCDQKLASYFLQALF 120

Query: 121 CKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGET 180
           CKATE+G  CYKTL ++ADK+HSFD++ KLILKFQE SPW TFGHVASNGAILEALEGET
Sbjct: 121 CKATESGQRCYKTLTSVADKSHSFDSARKLILKFQEVSPWMTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLE+LATRNDDTPHLKLTVV TT+ VKS+MKE+GQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTTSTVKSVMKEVGQRMEKFARL 240

Query: 241 MGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKP 300
           MGVPF+FN I  L +L +LTKE L V+EDEAI +NCIGALRRV +EER  VI M +SL+P
Sbjct: 241 MGVPFEFNAIMGLNHLAELTKEVLGVQEDEAIVVNCIGALRRVEVEERGAVIQMFQSLRP 300

Query: 301 RVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIV 360
           RV+TIVEEEAD  SS+++F+KCFEECLRFYTLYF+MLE+SFV TSNERL+LER+CSRSIV
Sbjct: 301 RVVTIVEEEADLSSSRDDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERDCSRSIV 360

Query: 361 RLLGC-DESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           R+L C DE   +   ERRE+G QWS+RLKE AFS   FS+DV+DDVKALLKRYK GWAL+
Sbjct: 361 RVLACDDEKSGEEDCERRERGSQWSERLKE-AFSPVGFSDDVVDDVKALLKRYKAGWALV 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                           + + D D  G+YLTWKEEPV+W SAWKP
Sbjct: 421 ----------------LPQGDHDDSGIYLTWKEEPVLWASAWKP 434

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL
Match: U5FI43_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s05450g PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.2e-163
Identity = 304/464 (65.52%), Postives = 368/464 (79.31%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFF---NQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAA 60
           MDIT F+ K+  T FF    QS+D       + +DMQS++S+++   P+ S ++ + ++ 
Sbjct: 1   MDITLFSPKDTLTHFFPSHQQSNDQ-----VAAIDMQSNSSNNNNNQPQTSHTSTSRSSD 60

Query: 61  TTLAATG--KWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
           +  A  G  KW+S LL ECARAISEKDS+KIHH LWMLNELASPYGD DQK+ASYFLQAL
Sbjct: 61  SGEACGGGNKWASKLLSECARAISEKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL 120

Query: 121 FCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FCKATE+G  C+KTL  +A+K+HSFD++ KLILKFQE SPWTTFGHVASNGAILEAL+GE
Sbjct: 121 FCKATESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGE 180

Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
           +KLHIIDISNTLCTQWPTLLE+LATRND+TP LKLTVV T +IV+S+MKEIGQRMEKFAR
Sbjct: 181 SKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASIVRSVMKEIGQRMEKFAR 240

Query: 241 LMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300
           LMGVPF+F  I+ L ++ +LTKE L V+EDEA+AINCIGALRRV ++ER++VI + +SL 
Sbjct: 241 LMGVPFEFKVISVLNHIGELTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFRSLN 300

Query: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360
           PRV+TIVEEEADF SS+ +F+KCFEECLR+YTLYF+MLE+SFV TSNERL+LERECSR+I
Sbjct: 301 PRVVTIVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNI 360

Query: 361 VRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           VR+L CDE       ERRE+G QWS+RL+E AFS   FS+DV+DDVKALLKRYK GWAL 
Sbjct: 361 VRVLACDEETGGGECERRERGVQWSERLRE-AFSPVGFSDDVVDDVKALLKRYKAGWAL- 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                           V  + D   G+YLTWKEEPVVW SAWKP
Sbjct: 421 ----------------VLPQGDHESGIYLTWKEEPVVWASAWKP 441

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL
Match: D7SPV9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00070 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.5e-161
Identity = 309/464 (66.59%), Postives = 359/464 (77.37%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHHLHFSN---LDMQSSTSHSSEYSPEQSPSAAAAAAA 60
           MD T FT K   T FF      HH    SN    DMQSS +         S S+ +    
Sbjct: 1   MDRTLFTPKG--TYFF------HHPTQQSNGTQPDMQSSNNQPQTSHTSTSRSSDSGEPC 60

Query: 61  TTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFC 120
            T    GKW+S+LLKECARAIS+KDS++IHH LWMLNELASPYGD DQK+ASYFLQALFC
Sbjct: 61  VT----GKWASSLLKECARAISDKDSSRIHHLLWMLNELASPYGDCDQKLASYFLQALFC 120

Query: 121 KATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGETK 180
           KATE+G  CYKTL ++A+K+HSFD++ KLILKFQE SPWTTFGHVASNGAILEALEGETK
Sbjct: 121 KATESGHRCYKTLSSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETK 180

Query: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLM 240
           LHIIDISNTLCTQWPTLLE+LATRND+TP LKLTVV T ++V+S+MKEIGQRMEKFARLM
Sbjct: 181 LHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASLVRSVMKEIGQRMEKFARLM 240

Query: 241 GVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKPR 300
           GVPF+F  I+ + +L +LTKE L V +DEA+A+NCIGALRRV +EER  VI  L+SL PR
Sbjct: 241 GVPFEFQVISGVNHLGELTKEGLGVRDDEAVAVNCIGALRRVEVEERRRVIQTLQSLGPR 300

Query: 301 VLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVR 360
           V+T+VEEEADF SS+N+F+KCFEECLRFYTLYF+MLE+SFV TSNERL+LERECSRSIVR
Sbjct: 301 VVTVVEEEADFSSSRNDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVR 360

Query: 361 LLGCDESEEQMGS--ERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           +L CD+ E+  G   ERREKG QWS+ LKE  FS   FSEDV+DDVKALLKRY+ GWAL+
Sbjct: 361 VLACDDIEDDTGEDCERREKGIQWSEGLKE-VFSPLGFSEDVVDDVKALLKRYRSGWALV 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                         GE H+      G+YLTWK+EPVVW SAWKP
Sbjct: 421 ----------PPQQGENHQ-----LGIYLTWKDEPVVWASAWKP 436

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL
Match: A5B7E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023622 PE=3 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 5.9e-161
Identity = 309/464 (66.59%), Postives = 359/464 (77.37%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHHLHFSN---LDMQSSTSHSSEYSPEQSPSAAAAAAA 60
           MD T FT K   T FF      HH    SN    DMQSS +         S S+ +    
Sbjct: 1   MDRTLFTPKG--TYFF------HHPTQQSNGTQPDMQSSNNQPQTSHTSTSRSSDSGEPC 60

Query: 61  TTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFC 120
            T    GKW+S+LLKECARAIS+KDS++IHH LWMLNELASPYGD DQK+ASYFLQALFC
Sbjct: 61  VT----GKWASSLLKECARAISDKDSSRIHHLLWMLNELASPYGDCDQKLASYFLQALFC 120

Query: 121 KATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGETK 180
           KATE+G  CYKTL ++A+K+HSFD++ KLILKFQE SPWTTFGHVASNGAILEALEGETK
Sbjct: 121 KATESGHRCYKTLSSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETK 180

Query: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLM 240
           LHIIDISNTLCTQWPTLLE+LATRND+TP LKLTVV T ++V+S+MKEIGQRMEKFARLM
Sbjct: 181 LHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASLVRSVMKEIGQRMEKFARLM 240

Query: 241 GVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKPR 300
           GVPF+F  I+ + +L +LTKE L V +DEA+A+NCIGALRRV +EER  VI  L+SL PR
Sbjct: 241 GVPFEFQVISGVNHLGELTKEGLGVRDDEAVAVNCIGALRRVEVEERRRVIQTLQSLGPR 300

Query: 301 VLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVR 360
           V+T+VEEEADF SS+N+F+KCFEECLRFYTLYF+MLE+SFV TSNERL+LERECSRSIVR
Sbjct: 301 VVTVVEEEADFSSSRNDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVR 360

Query: 361 LLGCDESEEQMGS--ERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           +L CD+ E+  G   ERREKG QWS+ LKE  FS   FSEDV+DDVKALLKRY+ GWAL+
Sbjct: 361 VLACDDIEDDTGEDCERREKGIQWSEGLKE-XFSPLGFSEDVVDDVKALLKRYRSGWALV 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                         GE H+      G+YLTWK+EPVVW SAWKP
Sbjct: 421 ----------PPQQGENHQ-----LGIYLTWKDEPVVWASAWKP 436

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10
Match: AT4G37650.1 (AT4G37650.1 GRAS family transcription factor)

HSP 1 Score: 395.2 bits (1014), Expect = 5.5e-110
Identity = 218/487 (44.76%), Postives = 308/487 (63.24%), Query Frame = 1


Query: 17  NQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAATTLA--------------- 76
           + S  H+HH H +     S  +  ++Y P  S + ++ AAA  LA               
Sbjct: 66  SSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAF 125

Query: 77  ------------ATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAS 136
                       A  KW+ ++L E ARA S+KD+ +    LW LNEL+SPYGD++QK+AS
Sbjct: 126 SIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLAS 185

Query: 137 YFLQALFCKATETGLTCYKTLVAIA--DKNHSFDTSLKLILKFQEASPWTTFGHVASNGA 196
           YFLQALF + T +G  CY+T+V  A  +K  SF+++ K +LKFQE SPW TFGHVA+NGA
Sbjct: 186 YFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGA 245

Query: 197 ILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTT-------TIVK 256
           ILEA++GE K+HI+DIS+T CTQWPTLLE+LATR+DDTPHL+LT V          T   
Sbjct: 246 ILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASH 305

Query: 257 SLMKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRV- 316
            +MKEIG RMEKFARLMGVPF FN I ++ +L++     L V+ DE +AINC+GA+  + 
Sbjct: 306 RMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA 365

Query: 317 -RIEERNNVISMLKSLKPRVLTIVEEEADFISSK-----NNFLKCFEECLRFYTLYFDML 376
            R   R+ VIS  + L+PR++T+VEEEAD +  +     + FL+ F ECLR++ + F+  
Sbjct: 366 SRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESW 425

Query: 377 EDSFVTTSNERLVLERECSRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEF 436
           E+SF  TSNERL+LER   R+IV L+ C+ S+    +ERRE  ++WS+R++ S F    +
Sbjct: 426 EESFPRTSNERLMLERAAGRAIVDLVACEPSD---STERRETARKWSRRMRNSGFGAVGY 485

Query: 437 SEDVLDDVKALLKRYKPG-WALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVV 460
           S++V DDV+ALL+RYK G W+++                   +  D+ G++L W+++PVV
Sbjct: 486 SDEVADDVRALLRRYKEGVWSMV-------------------QCPDAAGIFLCWRDQPVV 530

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10
Match: AT3G49950.1 (AT3G49950.1 GRAS family transcription factor)

HSP 1 Score: 185.7 bits (470), Expect = 6.6e-47
Identity = 129/410 (31.46%), Postives = 211/410 (51.46%), Query Frame = 1


Query: 70  LLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKT 129
           LL  CA AI   D+   H  LW+LN +A P GDS Q++ S FL+AL  +A     T   T
Sbjct: 30  LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89

Query: 130 LVAI--ADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTL 189
           +  +  AD+ H F  S+  +  F + +PW  FG +A+N AIL A+EG + +HI+D+S T 
Sbjct: 90  ISFLPQADELHRF--SVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTH 149

Query: 190 CTQWPTLLESLATR-NDDTPHLKLTVVTTT----TIVKSLMKEIGQRMEKFARLMGVPFD 249
           C Q PTL++++A+R N   P LKLTVV+++      +    +E+G ++  FA    +  +
Sbjct: 150 CMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITME 209

Query: 250 FN--PITNLENLTDLTKEALKV---EEDEAIAINCIGALRRVRIEE--------RNNVIS 309
           F   P T  +  + L ++ L++     +EA+ +NC   LR +  E         R   + 
Sbjct: 210 FTIVPSTYSDGFSSLLQQ-LRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLK 269

Query: 310 MLKSLKPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLER 369
            L+SL PR++T++EE+ D  S   N +   +    ++ + FD   D+F+  S +R   E 
Sbjct: 270 QLRSLNPRIVTLIEEDVDLTS--ENLVNRLKSAFNYFWIPFD-TTDTFM--SEQRRWYEA 329

Query: 370 ECSRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYK 429
           E S  I  ++  + +E     ER E  ++W +R++E+ F      ED + DVKA+L+ + 
Sbjct: 330 EISWKIENVVAKEGAER---VERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHA 389

Query: 430 PGWALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
            GW +                   +++DD   + LTWK   VV+ + W P
Sbjct: 390 VGWGM-------------------KKEDDDESLVLTWKGHSVVFATVWVP 409

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10
Match: AT2G04890.1 (AT2G04890.1 SCARECROW-like 21)

HSP 1 Score: 159.8 bits (403), Expect = 3.9e-39
Identity = 110/396 (27.78%), Postives = 198/396 (50.00%), Query Frame = 1


Query: 70  LLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKATETGLTCYKT 129
           +L  CA+A+SE +       +  L  + S  G+  Q++ +Y L+ L  +   +G + YK+
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 130 LVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCT 189
           L +   +++ F   L  +    E  P+  FG++++NGAI EA++ E ++HIID      +
Sbjct: 113 LQSREPESYEF---LSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 190 QWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMGVPFDFNPITNL 249
           QW  L+++ A R    P++++T V   +++ ++ K    R+EK A+   VPF FN ++  
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKK----RLEKLAKKFDVPFRFNAVSRP 232

Query: 250 ENLTDLTKEALKVEEDEAIAINCIGALRRVRIE------ERNNVISMLKSLKPRVLTIVE 309
               ++  E L V + EA+ +N    L  +  E       R+ ++ M+KSL P+V+T+VE
Sbjct: 233 S--CEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVE 292

Query: 310 EEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLEREC-SRSIVRLLGCD 369
           +E +  ++ + FL  F E L +YT  F+ ++        ER+ +E+ C +R +V ++ C+
Sbjct: 293 QECN--TNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACE 352

Query: 370 ESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRATITT 429
            +E     ER E   +W  R   + F     S  +   ++ALL+ Y  G+A         
Sbjct: 353 GAER---IERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYA--------- 412

Query: 430 TTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWK 459
                    + ERD     +YL W +  +V   AWK
Sbjct: 413 ---------IEERDG---ALYLGWMDRILVSSCAWK 413

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10
Match: AT5G48150.1 (AT5G48150.1 GRAS family transcription factor)

HSP 1 Score: 152.9 bits (385), Expect = 4.8e-37
Identity = 112/414 (27.05%), Postives = 199/414 (48.07%), Query Frame = 1


Query: 66  WSSTL-----------LKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQA 125
           W STL           L  CA+A+SE D    H  +  L ++ S  G+  Q++ +Y L+ 
Sbjct: 107 WRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEG 166

Query: 126 LFCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEG 185
           L  +   +G + YK L    +   +   S   IL   E  P+  FG++++NGAI EA++ 
Sbjct: 167 LVAQLASSGSSIYKALNRCPEPASTELLSYMHIL--YEVCPYFKFGYMSANGAIAEAMKE 226

Query: 186 ETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSL---MKEIGQRME 245
           E ++HIID      +QW TL+++ A R    P +++T +   T   +    +  +G R+ 
Sbjct: 227 ENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLA 286

Query: 246 KFARLMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIE------ERN 305
           K A+   VPF+FN ++   +++++  + L V   EA+A+N    L  +  E       R+
Sbjct: 287 KLAKQFNVPFEFNSVS--VSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRD 346

Query: 306 NVISMLKSLKPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERL 365
            ++ M+KSL P+V+T+VE+E++  ++   F   F E + +Y   F+ ++ +      +R+
Sbjct: 347 RLLRMVKSLSPKVVTLVEQESN--TNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRI 406

Query: 366 VLEREC-SRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKAL 425
            +E+ C +R +V ++ C+ ++     ER E   +W  R   + F+    S  V   +K+L
Sbjct: 407 NVEQHCLARDVVNIIACEGADR---VERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSL 466

Query: 426 LKRYKPGWALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWK 459
           L+ Y   + L                   ERD     +YL W    +V   AWK
Sbjct: 467 LRNYSDKYRL------------------EERDG---ALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10
Match: AT3G03450.1 (AT3G03450.1 RGA-like 2)

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 114/419 (27.21%), Postives = 196/419 (46.78%), Query Frame = 1


Query: 46  EQSPSAAAAAAATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQ 105
           E S  +  +        TG      L  CA AI +++ N     +  +  LA     +  
Sbjct: 159 ESSDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMG 218

Query: 106 KMASYFLQALFCKATETGLTCYKTLVAIADKNHSFDTSLKLILK--FQEASPWTTFGHVA 165
           K+A+YF QAL  +        Y+   A  D   + + S + +L+  F E+ P+  F H  
Sbjct: 219 KVATYFAQALARRI-------YRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFT 278

Query: 166 SNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLT-VVTTTTIVKSL 225
           +N AILEA+    ++H+ID+      QWP L+++LA R    P  +LT +    T     
Sbjct: 279 ANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDS 338

Query: 226 MKEIGQRMEKFARLMGVPFDFNPITNLENLTDLTKEALKVE-EDEAIAINCIGALRRV-- 285
           ++++G ++ +FA+ MGV F+F  +   E+L+DL  E  +   E E + +N +  L R+  
Sbjct: 339 LQQLGWKLAQFAQNMGVEFEFKGLA-AESLSDLEPEMFETRPESETLVVNSVFELHRLLA 398

Query: 286 RIEERNNVISMLKSLKPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVT 345
           R      +++ +K++KP ++T+VE+EA+   +   FL  F E L +Y+  FD LEDS+  
Sbjct: 399 RSGSIEKLLNTVKAIKPSIVTVVEQEAN--HNGIVFLDRFNEALHYYSSLFDSLEDSYSL 458

Query: 346 TSNERLVLERECSRSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLD 405
            S +R++ E    R I+ ++  + S+     ER E   QW  R+K + F           
Sbjct: 459 PSQDRVMSEVYLGRQILNVVAAEGSDR---VERHETAAQWRIRMKSAGFDPIHLGSSAFK 518

Query: 406 DVKALLKRYKPGWALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWK 459
               LL  Y                   ATG+ +  +++   + + W+  P++  SAWK
Sbjct: 519 QASMLLSLY-------------------ATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545

[Close]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr
Match: gi|449471114|ref|XP_004153213.1| (PREDICTED: protein SHORT-ROOT-like [Cucumis sativus])

HSP 1 Score: 781.9 bits (2018), Expect = 5.9e-223
Identity = 401/467 (85.87%), Postives = 428/467 (91.65%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHH-----LHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60
           MDITFFTAKEAPT+FFNQSHDH HH     LHFSNLDMQSSTSHSSEYSPE SPSAAAAA
Sbjct: 1   MDITFFTAKEAPTSFFNQSHDHRHHHQLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAAA 60

Query: 61  AATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
           A  T  ATGKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMA YFLQAL
Sbjct: 61  ATAT--ATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQAL 120

Query: 121 FCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FC+ATETGLTCYKTLVA+A+KNH+FD++L+LILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 121 FCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGE 180

Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
           TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTT+IVK LMKEIGQRMEKFAR
Sbjct: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFAR 240

Query: 241 LMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300
           LMGVPF+FNPITN+++LTDLT EALKVEE EAIAINCIGALRRV++EERNNVISMLKSLK
Sbjct: 241 LMGVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLK 300

Query: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360
           PRVLTIVEEEADFISSKN+FLKCFEECLRFYTLYF+MLE+SFV TSNERLVLERECSRSI
Sbjct: 301 PRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 360

Query: 361 VRLLGCDE---SEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGW 420
           VRLLGCD    SEE++GSERREKGKQW+KRLK++ FS A FSEDV+DDVKALLKRYKPGW
Sbjct: 361 VRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGW 420

Query: 421 ALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
           ALLR A      TAA   E    D +S G+YLTWKEEPVVWVSAWKP
Sbjct: 421 ALLRPA------TAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459

[Close]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr
Match: gi|659120132|ref|XP_008460030.1| (PREDICTED: protein SHORT-ROOT-like [Cucumis melo])

HSP 1 Score: 775.4 bits (2001), Expect = 5.5e-221
Identity = 398/468 (85.04%), Postives = 423/468 (90.38%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDH------HHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAA 60
           MDITFFT KEAPT+FFNQSHDH      HHHLHFSNLDMQSSTSHSSEYSPE SPSAAAA
Sbjct: 1   MDITFFTPKEAPTSFFNQSHDHRHHHHHHHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAA 60

Query: 61  AAATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQA 120
           AA  T  ATGKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQA
Sbjct: 61  AATAT--ATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQA 120

Query: 121 LFCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEG 180
           LFC+ATETGLTCYKTLVA+A+KNH+FD++L+LILKFQEASPWTTFGHVASNGAILEALEG
Sbjct: 121 LFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEG 180

Query: 181 ETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFA 240
           ETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTT+IVK LMKEIGQRMEKFA
Sbjct: 181 ETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFA 240

Query: 241 RLMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSL 300
           RLMGVPF+FNPITN+ +LTDLT EALKVEE EAIAINCIGALRRV++EERNNVISMLK L
Sbjct: 241 RLMGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKLL 300

Query: 301 KPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRS 360
           KPRVLTIVEEEADFISS N+FLKCFEECLRFYTLYF+MLE+SF  TSNERLVLERECSRS
Sbjct: 301 KPRVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLEESFGATSNERLVLERECSRS 360

Query: 361 IVRLLGCDE---SEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPG 420
           IVRLLGCD    SEE+MGSERREKGKQW+KRLK++ FS A FSEDV+DDVKALLKRYKPG
Sbjct: 361 IVRLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPG 420

Query: 421 WALLRRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
           WALLR A     T A    E    D +  G+YLTWKEEPVVWVSAWKP
Sbjct: 421 WALLRPA-----TAAVGVDEEENGDAEPSGIYLTWKEEPVVWVSAWKP 461

[Close]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr
Match: gi|685431531|gb|AIO08308.1| (GRAS family transcription factor SHR2 [Quercus suber])

HSP 1 Score: 588.6 bits (1516), Expect = 9.6e-165
Identity = 309/464 (66.59%), Postives = 359/464 (77.37%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFFNQSHDHHHH----LHFSNLDMQSSTSHSSEYSPEQSPSAAAAAA 60
           MDIT FT +E+P  FF  +   +      +H +N    S TS S        PSA+    
Sbjct: 1   MDITLFTPEESP--FFQSTQQSNGQAAIDMHSNNQPQNSHTSTSRSSDSGVLPSAS---- 60

Query: 61  ATTLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120
                  GKW+S LLKECA+AISEKDS+KIH  LW+LNELASPYGD DQK+ASYFLQALF
Sbjct: 61  -------GKWASRLLKECAQAISEKDSSKIHQLLWLLNELASPYGDCDQKLASYFLQALF 120

Query: 121 CKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGET 180
           CKATE+G  CYKTL ++ADK+HSFD++ KLILKFQE SPW TFGHVASNGAILEALEGET
Sbjct: 121 CKATESGQRCYKTLTSVADKSHSFDSARKLILKFQEVSPWMTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLE+LATRNDDTPHLKLTVV TT+ VKS+MKE+GQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLEALATRNDDTPHLKLTVVVTTSTVKSVMKEVGQRMEKFARL 240

Query: 241 MGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKP 300
           MGVPF+FN I  L +L +LTKE L V+EDEAI +NCIGALRRV +EER  VI M +SL+P
Sbjct: 241 MGVPFEFNAIMGLNHLAELTKEVLGVQEDEAIVVNCIGALRRVEVEERGAVIQMFQSLRP 300

Query: 301 RVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIV 360
           RV+TIVEEEAD  SS+++F+KCFEECLRFYTLYF+MLE+SFV TSNERL+LER+CSRSIV
Sbjct: 301 RVVTIVEEEADLSSSRDDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERDCSRSIV 360

Query: 361 RLLGC-DESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           R+L C DE   +   ERRE+G QWS+RLKE AFS   FS+DV+DDVKALLKRYK GWAL+
Sbjct: 361 RVLACDDEKSGEEDCERRERGSQWSERLKE-AFSPVGFSDDVVDDVKALLKRYKAGWALV 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                           + + D D  G+YLTWKEEPV+W SAWKP
Sbjct: 421 ----------------LPQGDHDDSGIYLTWKEEPVLWASAWKP 434

[Close]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr
Match: gi|566211552|ref|XP_006372828.1| (hypothetical protein POPTR_0017s05450g [Populus trichocarpa])

HSP 1 Score: 583.6 bits (1503), Expect = 3.1e-163
Identity = 304/464 (65.52%), Postives = 368/464 (79.31%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFF---NQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAA 60
           MDIT F+ K+  T FF    QS+D       + +DMQS++S+++   P+ S ++ + ++ 
Sbjct: 1   MDITLFSPKDTLTHFFPSHQQSNDQ-----VAAIDMQSNSSNNNNNQPQTSHTSTSRSSD 60

Query: 61  TTLAATG--KWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
           +  A  G  KW+S LL ECARAISEKDS+KIHH LWMLNELASPYGD DQK+ASYFLQAL
Sbjct: 61  SGEACGGGNKWASKLLSECARAISEKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL 120

Query: 121 FCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FCKATE+G  C+KTL  +A+K+HSFD++ KLILKFQE SPWTTFGHVASNGAILEAL+GE
Sbjct: 121 FCKATESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGE 180

Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
           +KLHIIDISNTLCTQWPTLLE+LATRND+TP LKLTVV T +IV+S+MKEIGQRMEKFAR
Sbjct: 181 SKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASIVRSVMKEIGQRMEKFAR 240

Query: 241 LMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300
           LMGVPF+F  I+ L ++ +LTKE L V+EDEA+AINCIGALRRV ++ER++VI + +SL 
Sbjct: 241 LMGVPFEFKVISVLNHIGELTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFRSLN 300

Query: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360
           PRV+TIVEEEADF SS+ +F+KCFEECLR+YTLYF+MLE+SFV TSNERL+LERECSR+I
Sbjct: 301 PRVVTIVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNI 360

Query: 361 VRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           VR+L CDE       ERRE+G QWS+RL+E AFS   FS+DV+DDVKALLKRYK GWAL 
Sbjct: 361 VRVLACDEETGGGECERRERGVQWSERLRE-AFSPVGFSDDVVDDVKALLKRYKAGWAL- 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                           V  + D   G+YLTWKEEPVVW SAWKP
Sbjct: 421 ----------------VLPQGDHESGIYLTWKEEPVVWASAWKP 441

[Close]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr
Match: gi|743883871|ref|XP_011037138.1| (PREDICTED: protein SHORT-ROOT-like [Populus euphratica])

HSP 1 Score: 581.3 bits (1497), Expect = 1.5e-162
Identity = 303/464 (65.30%), Postives = 368/464 (79.31%), Query Frame = 1


Query: 1   MDITFFTAKEAPTTFF---NQSHDHHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAA 60
           MDIT F+ K+  T FF    QS+D       + +DMQS++S+++   P+ S ++ + ++ 
Sbjct: 1   MDITLFSPKDTLTHFFPSHQQSNDQ-----VAAIDMQSNSSNNNNNHPQTSHTSTSRSSD 60

Query: 61  TTLAATG--KWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
           +  A  G  KW+S LL ECARAIS+KDS+KIHH LWMLNELASPYGD DQK+ASYFLQAL
Sbjct: 61  SGEACGGGNKWASKLLSECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL 120

Query: 121 FCKATETGLTCYKTLVAIADKNHSFDTSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FCKATE+G  C+KTL  +A+K+HSFD++ KLILKFQE SPWTTFGHVASNGAILEAL+GE
Sbjct: 121 FCKATESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGE 180

Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
           +KLHIIDISNTLCTQWPTLLE+LATRND+TP LKLTVV T +IV+S+MKEIGQRMEKFAR
Sbjct: 181 SKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASIVRSVMKEIGQRMEKFAR 240

Query: 241 LMGVPFDFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300
           LMGVPF+F  I+ L ++ +LTKE L V+EDEA+AINCIGALRRV ++ER++VI + +SL 
Sbjct: 241 LMGVPFEFKVISVLNHVGELTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFQSLN 300

Query: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360
           PRV+TIVEEEADF SS+ +F+KCFEECLR+YTLYF+MLE+SFV TSNERL+LERECSR+I
Sbjct: 301 PRVVTIVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNI 360

Query: 361 VRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
           VR+L CDE       ERRE+G QWS+RL+E AFS   FS+DV+DDVKALLKRYK GWAL 
Sbjct: 361 VRVLACDEETGGGECERRERGVQWSERLRE-AFSPVGFSDDVVDDVKALLKRYKAGWAL- 420

Query: 421 RRATITTTTTAAATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 460
                           V  + D   G+YLTWKEEPVVW SAWKP
Sbjct: 421 ----------------VLPQGDHESGIYLTWKEEPVVWASAWKP 441

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09770.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHR_ARATH	9.8e-109	44.76	Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1	[more]
SHR2_ORYSI	6.5e-105	47.66	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1	[more]
SHR2_ORYSJ	8.5e-105	47.66	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1	[more]
SHR1_ORYSI	2.3e-102	45.94	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1	[more]
SHR1_ORYSJ	3.0e-102	45.94	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2	[more]

BLAST of Cp4.1LG12g09770.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K966_CUCSA	4.1e-223	85.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081510 PE=3 SV=1	[more]
A0A0A7DLK9_QUESU	6.7e-165	66.59	GRAS family transcription factor SHR2 OS=Quercus suber PE=2 SV=1	[more]
U5FI43_POPTR	2.2e-163	65.52	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s05450g PE=3 SV=1	[more]
D7SPV9_VITVI	4.5e-161	66.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00070 PE=3 SV=...	[more]
A5B7E2_VITVI	5.9e-161	66.59	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023622 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g09770.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37650.1	5.5e-110	44.76	GRAS family transcription factor	[more]
AT3G49950.1	6.6e-47	31.46	GRAS family transcription factor	[more]
AT2G04890.1	3.9e-39	27.78	SCARECROW-like 21	[more]
AT5G48150.1	4.8e-37	27.05	GRAS family transcription factor	[more]
AT3G03450.1	2.0e-35	27.21	RGA-like 2	[more]

BLAST of Cp4.1LG12g09770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449471114\|ref\|XP_004153213.1\|	5.9e-223	85.87	PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]	[more]
gi\|659120132\|ref\|XP_008460030.1\|	5.5e-221	85.04	PREDICTED: protein SHORT-ROOT-like [Cucumis melo]	[more]
gi\|685431531\|gb\|AIO08308.1\|	9.6e-165	66.59	GRAS family transcription factor SHR2 [Quercus suber]	[more]
gi\|566211552\|ref\|XP_006372828.1\|	3.1e-163	65.52	hypothetical protein POPTR_0017s05450g [Populus trichocarpa]	[more]
gi\|743883871\|ref\|XP_011037138.1\|	1.5e-162	65.30	PREDICTED: protein SHORT-ROOT-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0048366	leaf development
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g09770	Cp4.1LG12g09770	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09770.1:five_prime_utr:001	Cp4.1LG12g09770.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09770.1:cds:001	Cp4.1LG12g09770.1:cds:001	CDS
Cp4.1LG12g09770.1:cds:002	Cp4.1LG12g09770.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09770.1:three_prime_utr:001	Cp4.1LG12g09770.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09770.1	Cp4.1LG12g09770.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 69..458 score: 4.0
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 41..418 score: 48
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 435..459 score: 3.9E-260coord: 29..416 score: 3.9E
None	No IPR available	PANTHER	PTHR31636:SF36	SUBFAMILY NOT NAMED	coord: 435..459 score: 3.9E-260coord: 29..416 score: 3.9E