Cp4.1LG12g06890.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g06890.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription factor protein
Location	Cp4.1LG12 : 7291377 .. 7295237 (-)
Sequence length	2488

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATCGCCATTTGCTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTACGCTTGGAAGTTCTAGTGAAGCGTTTTCAGTATAAGAATCATCGATTTTATTGCTCAGATTGCTTCCTAAGAATCTCTTGTCTTGATTTTGCAAGTTTTTGAGGTGAGAAAGATTGAAAATGGTGATTGTCTAGAATTGAAGTTTTTTTCTGTTCTTGGATTATGCTTACTGTTGTGTGTTTTTATGCTCTGGTTGCAGACTTTGGGTTTTGATTTTGTTTGAATCCATTGAAAACAGTTTTTGGGATTTGGAATTTCGTCGAACAGTTTAGGGGCACTATGAGCCTTCTTTGCAGTCCAAATTTCAAATTCTCCAACGACGAAGTGAAGAAATACCCTGATTTTATGGATTGCGATTCAACGAACAATCATGTTTCTCAACAAGAGAACCCTAACTCTGCTCCCCACTCTCTGTTTGCGAGTCTAGTTAATGGAACTGAAGGTTTTGATTCGAATAACAATGGCGGTGGGGGCCGTGAGGATTATCGCTTCATTCGATCTTCGAGCCCTGGGGTGGAGGCTTTTTTGTCTAGGTTTATGGCGTCGTATAATGAAGAAACCTTTGATTCGGGGTCTGATGAGAGGGCGGTGAAACAGGAAATGGGGGAATCGGTGCGACAACATAATGAGTTCTGTAATCAATCCTCTTCAATGGTTAATTCTGCTGGTGGAGCTCAGATTGGAAATTTATTTCGTGTTATGAATTCTTCTGATTATGGTGCGAGGAATTCCGCTAATCTTTTCAGGCAAAGTAGCTCTCCTGCTGGGTTTTTCTCTAATTTGGCTCCTCAAAATGGTATGAAATCCCTTTTTGGTTTATGTTTTGGTTCTTGTTCTTTCATATTGGTGAAGTTCTTAGCTCCAAATCTGAATTTGGTTTGATTTCTTGTGAAAATATGGATTGCTTCATCTTCTTGTACTCTTTAAAAATCTGACCCCCTATGAACTCGAGCAAAAGGCTACTGAATTGACCTATCTCTTGTTGTAAGAGTCCAATGAACTCGAGCAAAAGGCTACTGAATTGACCTATCTCTTGTTGTAAGAGGCCAAGCTCTTCGCTAGTAGATATTGTTCTCTTTGATCTTTCTGAACTTAAACTTCGGACTTCCTTCAAGGTTTTAAACCACTTCTGTTAGGGAGAAGTTTCTCACAATCAATTGAATGGGTCTCACAATTAGTTAGAGAGGGGAACGAAGCATTCTTTGTAAGAGTGAGAAAACCTCTCCTTAGTAGATGTGTTTTAAAACCTTGAAGAAAAGCCCACCCGAAAGGGAAGCTTAAAGAGGATAATATCTAATTGCGGTGAGCTTGGACTGTTACACTTTGCTTTTTTTGACTCGCAGAACGAATTCTGAGTCACTTTTTAACAGGACTACCTCTTCTCTTGATGACTAGCAGGCAATGCTGCGAGGGATATCCAGAAGTTTGGGAGTTGCAGCAGAAAAGATGTGGATGTTGCTTATCCATATAGCCGGATTGGTAGCCAGATGAACATAACTGGGCAATCGTTTGCCTCAACCCATATGCCTCCAATTGCAGAAGAGGAGAATAAAAGGATGAGAGCTGTAAGAAGTTCTTGGGATAGCTCAACAATCAGAGACTTAAAAAGAGGGAGAGATAACAATGGACGCACGTTTCCAACATCAATCCTGCTTGAGACTCAGGTACTATCTTATACGACCTGCCAAGTTTTGTCTGCTTCATGTGCTTTGAAACTCAGTTTGTGTGAGATCTTATATCGACTGGAGAGGGGAACGAAGTATTCCTTACAAGAGTGTGGAAACCTCTTCCCAGTAGATGCGTTTCAAAAACTGTGAGACGGTTTTAGGTAACGGGTCAAAGTGGACAATATCTGCTAGAGATGGGGTTTGTGTTTTTTTACAAATGGTATTAGAGCCAGACACTAGGCGATATGCCAGCAAGGACCCTAACTCCTAAGAGGTGGATTGTGAGATCCCAAATCGGGTGGAGAGGAGAATGAAATATTTTAAAAACTGTGAGGCTGGCGGCGATACGTAAACGGGCCAAAGCTGACAATATCTACCGGCAACACGACTTAACAATCTTTGTTCTGCAGAATGCTGATTCAGGAAATGACATTCGTGGATTGGCTCATCATTTGAGCTTACCTATAACTTTCAACAAGGACCCAGTGGAGAAGTTTCTGAGATTTGAAGAGCCAGTTCGTCACCAAATTCGAGCAAAAAGAGGATGCGCCACGCACCCACGAAGCATCGCAGAGCGGGTAGATCGATCGATCGATCCTCTCTTTGTTCAATCAAACTCTCATTGATTGTCCTAATCTAATGAACTCTAACTCGTCAAATTCTTGAATTTGCAGATGAGAAGAATCCGAATTAGTGAGCGAATGAAGAAACTGCAGGAGCTGTTTCCTGACATGGACAAGGTAATTATCCTCAGCCCACCTCATAAATCTTTCATACACCGCACAGTTTTGATATCTAAACACTCTTCCTTGCAGCAGACAAGCACAGCTGATATGCTAGAGCTGGCCATTGAATACATTAAAGGCCTGCAGAGACAGGTCAAGGTAGCCTCCTAACAACACAAAGTTAATGAAATCACATGAACATCCAACCAACCAACGCCTTTTACTCACAAAAGCTTTGTCTTTTTTGCAGACCCTTACCGATACGAAAGCGAAATGCACGTGCTCGGGTCAATAACAAGAACCCAGAAAAATGATCTGTACAGACCACATAGTAAGCTTAAAGGAACATGAAGATACAAGAAAGAAGAACACAACATTGTGTACTCTATTTAAAAGTTATAGGATTTAAGGAGATTGTCTGTCATAGAATCTATTGTAAGTTACAAGTTCAATGTAAAAGATCATTCATTCAGCAATATCTAATTGAATAATTTGCTTTCTGGCATGTATATGTGCTTGTTGGATCATCATATGCATAGCTATAAGCCATCGGACAAGCTAACTTGAACGCTTTCGAGTAAACCGTCGGTTTGCACGTCTGCGGGCTGCCGTATGCACCAGTGCAGCAATACTCTGGCTTGTCGAAAGCCAAGCATGCACTCCGACAAGCAACAACCGTACCGTTCTTCTTCATCTCCAAACCACGGGGGCATTGTCGATTCAAGTCCGACAGGCATTTCACCATTTGACAATTCCCAGAGCCACCATATGGGGATATTGAAATCGGCATGTTATAGCCATCAACAAGGCTAACATCATAGAAATCCAAAGGACTGTCTAAGGTGAACTCTGCAAGTGTAGCAGGCGGGGCACCTCCTGAGCCTGAACATTTAAGCACGCCACCGCAGTCGCCCGTTTCGCACCTTCCATTGCCGGAGACATCGAAGGAACATCCACGACGACCCCAGAATCGGCCAGACCATCCAGCAGGCGCCTTGATCGTTACGATCTCGCCAGGCTTAAGCTGAAATCCGCCGCTCATGAGCTGAGGCTTCCCAGCTCCTGGTTGGATTCCTGGCCATATTATGTCACTACATTTGTTCTCCAAAGTGAAAACTGCCGCATCAGTGCCTGAAAAGGAAAGCTATCAATCAAAACACGTTATAAAGAGTGAAAAAGAGAGAGATTTGTGGTTGGTACCCATGAAAAAGCACAAAAGCAGAAGCAAAAACAGGAAGAACTCCATGGAAGCAGCAAAATGGAAGCTTGGAAGAGTTGTTTTTAAGGGCAATTTTCTGACCCTGAAATTATAAGAATGGGCAACAACAAAGTCAATAACTTGTCACATGATGATGAATGTCTTGAGCCTTAAAAAGTTACCAAAATTGGGTGCCAAAACTCCCTAC

mRNA sequence

GTTATCGCCATTTGCTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTACGCTTGGAAGTTCTAGTGAAGCGTTTTCAGTATAAGAATCATCGATTTTATTGCTCAGATTGCTTCCTAAGAATCTCTTGTCTTGATTTTGCAAGTTTTTGAGACTTTGGGTTTTGATTTTGTTTGAATCCATTGAAAACAGTTTTTGGGATTTGGAATTTCGTCGAACAGTTTAGGGGCACTATGAGCCTTCTTTGCAGTCCAAATTTCAAATTCTCCAACGACGAAGTGAAGAAATACCCTGATTTTATGGATTGCGATTCAACGAACAATCATGTTTCTCAACAAGAGAACCCTAACTCTGCTCCCCACTCTCTGTTTGCGAGTCTAGTTAATGGAACTGAAGGTTTTGATTCGAATAACAATGGCGGTGGGGGCCGTGAGGATTATCGCTTCATTCGATCTTCGAGCCCTGGGGTGGAGGCTTTTTTGTCTAGGTTTATGGCGTCGTATAATGAAGAAACCTTTGATTCGGGGTCTGATGAGAGGGCGGTGAAACAGGAAATGGGGGAATCGGTGCGACAACATAATGAGTTCTGTAATCAATCCTCTTCAATGGTTAATTCTGCTGGTGGAGCTCAGATTGGAAATTTATTTCGTGTTATGAATTCTTCTGATTATGGTGCGAGGAATTCCGCTAATCTTTTCAGGCAAAGTAGCTCTCCTGCTGGGTTTTTCTCTAATTTGGCTCCTCAAAATGGCAATGCTGCGAGGGATATCCAGAAGTTTGGGAGTTGCAGCAGAAAAGATGTGGATGTTGCTTATCCATATAGCCGGATTGGTAGCCAGATGAACATAACTGGGCAATCGTTTGCCTCAACCCATATGCCTCCAATTGCAGAAGAGGAGAATAAAAGGATGAGAGCTGTAAGAAGTTCTTGGGATAGCTCAACAATCAGAGACTTAAAAAGAGGGAGAGATAACAATGGACGCACGTTTCCAACATCAATCCTGCTTGAGACTCAGAATGCTGATTCAGGAAATGACATTCGTGGATTGGCTCATCATTTGAGCTTACCTATAACTTTCAACAAGGACCCAGTGGAGAAGTTTCTGAGATTTGAAGAGCCAGTTCGTCACCAAATTCGAGCAAAAAGAGGATGCGCCACGCACCCACGAAGCATCGCAGAGCGGATGAGAAGAATCCGAATTAGTGAGCGAATGAAGAAACTGCAGGAGCTGTTTCCTGACATGGACAAGCAGACAAGCACAGCTGATATGCTAGAGCTGGCCATTGAATACATTAAAGGCCTGCAGAGACAGGTCAAGACCCTTACCGATACGAAAGCGAAATGCACGTGCTCGGGTCAATAACAAGAACCCAGAAAAATGATCTGTACAGACCACATAGTAAGCTTAAAGGAACATGAAGATACAAGAAAGAAGAACACAACATTGTGTACTCTATTTAAAAGTTATAGGATTTAAGGAGATTGTCTGTCATAGAATCTATTGTAAGTTACAAGTTCAATGTAAAAGATCATTCATTCAGCAATATCTAATTGAATAATTTGCTTTCTGGCATGTATATGTGCTTGTTGGATCATCATATGCATAGCTATAAGCCATCGGACAAGCTAACTTGAACGCTTTCGAGTAAACCGTCGGTTTGCACGTCTGCGGGCTGCCGTATGCACCAGTGCAGCAATACTCTGGCTTGTCGAAAGCCAAGCATGCACTCCGACAAGCAACAACCGTACCGTTCTTCTTCATCTCCAAACCACGGGGGCATTGTCGATTCAAGTCCGACAGGCATTTCACCATTTGACAATTCCCAGAGCCACCATATGGGGATATTGAAATCGGCATGTTATAGCCATCAACAAGGCTAACATCATAGAAATCCAAAGGACTGTCTAAGGTGAACTCTGCAAGTGTAGCAGGCGGGGCACCTCCTGAGCCTGAACATTTAAGCACGCCACCGCAGTCGCCCGTTTCGCACCTTCCATTGCCGGAGACATCGAAGGAACATCCACGACGACCCCAGAATCGGCCAGACCATCCAGCAGGCGCCTTGATCGTTACGATCTCGCCAGGCTTAAGCTGAAATCCGCCGCTCATGAGCTGAGGCTTCCCAGCTCCTGGTTGGATTCCTGGCCATATTATGTCACTACATTTGTTCTCCAAAGTGAAAACTGCCGCATCAGTGCCTGAAAAGGAAAGCTATCAATCAAAACACGTTATAAAGAGTGAAAAAGAGAGAGATTTGTGGTTGGTACCCATGAAAAAGCACAAAAGCAGAAGCAAAAACAGGAAGAACTCCATGGAAGCAGCAAAATGGAAGCTTGGAAGAGTTGTTTTTAAGGGCAATTTTCTGACCCTGAAATTATAAGAATGGGCAACAACAAAGTCAATAACTTGTCACATGATGATGAATGTCTTGAGCCTTAAAAAGTTACCAAAATTGGGTGCCAAAACTCCCTAC

Coding sequence (CDS)

ATGAGCCTTCTTTGCAGTCCAAATTTCAAATTCTCCAACGACGAAGTGAAGAAATACCCTGATTTTATGGATTGCGATTCAACGAACAATCATGTTTCTCAACAAGAGAACCCTAACTCTGCTCCCCACTCTCTGTTTGCGAGTCTAGTTAATGGAACTGAAGGTTTTGATTCGAATAACAATGGCGGTGGGGGCCGTGAGGATTATCGCTTCATTCGATCTTCGAGCCCTGGGGTGGAGGCTTTTTTGTCTAGGTTTATGGCGTCGTATAATGAAGAAACCTTTGATTCGGGGTCTGATGAGAGGGCGGTGAAACAGGAAATGGGGGAATCGGTGCGACAACATAATGAGTTCTGTAATCAATCCTCTTCAATGGTTAATTCTGCTGGTGGAGCTCAGATTGGAAATTTATTTCGTGTTATGAATTCTTCTGATTATGGTGCGAGGAATTCCGCTAATCTTTTCAGGCAAAGTAGCTCTCCTGCTGGGTTTTTCTCTAATTTGGCTCCTCAAAATGGCAATGCTGCGAGGGATATCCAGAAGTTTGGGAGTTGCAGCAGAAAAGATGTGGATGTTGCTTATCCATATAGCCGGATTGGTAGCCAGATGAACATAACTGGGCAATCGTTTGCCTCAACCCATATGCCTCCAATTGCAGAAGAGGAGAATAAAAGGATGAGAGCTGTAAGAAGTTCTTGGGATAGCTCAACAATCAGAGACTTAAAAAGAGGGAGAGATAACAATGGACGCACGTTTCCAACATCAATCCTGCTTGAGACTCAGAATGCTGATTCAGGAAATGACATTCGTGGATTGGCTCATCATTTGAGCTTACCTATAACTTTCAACAAGGACCCAGTGGAGAAGTTTCTGAGATTTGAAGAGCCAGTTCGTCACCAAATTCGAGCAAAAAGAGGATGCGCCACGCACCCACGAAGCATCGCAGAGCGGATGAGAAGAATCCGAATTAGTGAGCGAATGAAGAAACTGCAGGAGCTGTTTCCTGACATGGACAAGCAGACAAGCACAGCTGATATGCTAGAGCTGGCCATTGAATACATTAAAGGCCTGCAGAGACAGGTCAAGACCCTTACCGATACGAAAGCGAAATGCACGTGCTCGGGTCAATAA

Protein sequence

MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNSAPHSLFASLVNGTEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESVRQHNEFCNQSSSMVNSAGGAQIGNLFRVMNSSDYGARNSANLFRQSSSPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIAEEENKRMRAVRSSWDSSTIRDLKRGRDNNGRTFPTSILLETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCSGQ

Homology

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BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.7e-38
Identity = 132/374 (35.29%), Postives = 200/374 (53.48%), Query Frame = 1


Query: 28  TNNHVSQQENPN--------SAPHSLFASLVNGTE-GFDSNNNGGGGREDYRFIRSSSPG 87
           +NNH+    NP         SAP S+ A+ V+  + GFDS+      R   RF+ S+   
Sbjct: 3   SNNHL-YDPNPTGSGLLRFRSAPSSVLAAFVDDDKIGFDSD------RLLSRFVTSNGVN 62

Query: 88  VEAFLSRF-----MASYNEETFDSGSDERAVKQEMGESVRQHNEFCNQSSSMVNSAGGAQ 147
            +    +F     ++  N     + +     + E    +     +  QS  ++NS G  Q
Sbjct: 63  GDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQ 122

Query: 148 IGNLFRVMNSSDYGARNSANLFRQSSSPAGFFSNLAPQNG-NAARDIQKFGSCSRKDVDV 207
              +     ++ +     +NL RQSSSPAG F+NL+ QNG  + R++  +     +D + 
Sbjct: 123 FLGI-----NNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNY----EEDEES 182

Query: 208 AYPYSRIGSQMNITGQSFASTHM----PPIAEEENKRMRAVRSSWDSST-----IRDLKR 267
               + +    +++ +  +S  M    P IA E N       S W+  +     +  LKR
Sbjct: 183 PSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPETNFPY----SHWNDPSSFIDNLSSLKR 242

Query: 268 GRDNNGRTFPTSILLETQNADSGNDIRGLAHHLSLPITFNKDP----VEKFLRFEEPVRH 327
             +++G+ F     L  QN +SGN ++ L+HHLSLP + +       V+K+L+ ++ V  
Sbjct: 243 EAEDDGKLF-----LGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQDSVPC 302

Query: 328 QIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQR 374
           +IRAKRGCATHPRSIAER+RR RISERM+KLQEL P+MDKQT+T+DML+LA++YIK LQR
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 351

[Close]

BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 9.0e-28
Identity = 66/116 (56.90%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 259 ETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERM 318
           +T++ DS +    LAHH+SLP + +   +E+ L    P +  IRAKRGCATHPRSIAER+
Sbjct: 266 KTKDEDSASRRPPLAHHMSLPKSLSD--IEQLLSDSIPCK--IRAKRGCATHPRSIAERV 325

Query: 319 RRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           RR +ISERM+KLQ+L P+MD QT+TADML+LA++YIK LQ QVK L +++A+C CS
Sbjct: 326 RRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377

[Close]

BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-26
Identity = 108/346 (31.21%), Postives = 165/346 (47.69%), Query Frame = 1


Query: 40  SAPHSLFASLVNGTEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGS 99
           SAP S   S+V+   G        GG  + R      P  + F+  F     + +     
Sbjct: 28  SAPGSFLNSVVDEVIG--------GGSSNARDFTGYQPSSDNFIGNFFTGAADSSSLRSD 87

Query: 100 DERAVKQEMGESVRQ----HNEFCNQSSSMVNSAGGAQIGNLFRVMNSSDYGARNSA--- 159
                     +  +Q    +N   N+   +  S GG     + +   S+D G  NS+   
Sbjct: 88  STTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGG--FNEISQQHKSNDIGGGNSSGSY 147

Query: 160 NLFRQSSSPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQS--- 219
           +L RQ SSPA FF+ LA    N + +        +   +    +SR+ SQ++ T      
Sbjct: 148 SLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHSRLKSQLSFTNHDSLA 207

Query: 220 -FASTHMPPIAEEENKRMRAVRSSWDSSTIRDLKRGRDNNGRTFPTSILLETQNADSGND 279
                +  P+ +       A  +S+ ++T      G  + G T  T     +++ DS   
Sbjct: 208 RINEVNETPVHDGSGHSFSA--ASFGAATTDSWDDGSGSIGFTV-TRPSKRSKDMDS--- 267

Query: 280 IRGLAHHLSLPITFNKDPVEKFLRF-EEPVRHQIRAKRGCATHPRSIAERMRRIRISERM 339
             GL    SLP   + + ++ F++  E+ V  +IRAKRGCATHPRSIAER RR RIS ++
Sbjct: 268 --GLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKL 327

Query: 340 KKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTC 374
           KKLQ+L P+MDKQTS +DML+LA+++IKGLQ Q++ L   +  CTC
Sbjct: 328 KKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 355

[Close]

BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.6e-24
Identity = 54/80 (67.50%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 294 EEPVRHQIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEY 353
           E+ V  ++RAKRGCATHPRSIAER+RR RIS+R++KLQEL P+MDKQT+TADMLE A+EY
Sbjct: 177 EDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEY 236

Query: 354 IKGLQRQVKTLTDTKAKCTC 374
           +K LQRQ++ LT+ + +CTC
Sbjct: 237 VKVLQRQIQELTEEQKRCTC 256

[Close]

BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-23
Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1


Query: 293 FEEPVRHQIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIE 352
           FE+ V  ++RAKRGCATHPRSIAER+RR RIS+R+++LQEL P+MDKQT+TADMLE A+E
Sbjct: 173 FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVE 232

Query: 353 YIKGLQRQVKTLTDTKAKCTC 374
           Y+K LQ Q++ LT+ + +C C
Sbjct: 233 YVKALQSQIQELTEQQKRCKC 253

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL
Match: A0A0A0K9U6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428890 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.5e-154
Identity = 300/416 (72.12%), Postives = 331/416 (79.57%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPTSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGTREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVNS----AGG-AQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           +Q N FCNQ SSMVN+    AGG A +GN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 QQQNGFCNQPSSMVNTRSVDAGGRAPVGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDVD AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLIAENGNTTREVDKFGTCNRKDVDAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD KRGRDNNGR F TSI+L
Sbjct: 241 EEENKSIGIVGSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDTKRGRDNNGRAFATSIVL 300

Query: 301 ETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERM 360
           ETQNADSGN+IRGLAHHLSLPI+FNKDPVEKFLRF+EPV HQIRAKRGCATHPRSIAERM
Sbjct: 301 ETQNADSGNNIRGLAHHLSLPISFNKDPVEKFLRFQEPVPHQIRAKRGCATHPRSIAERM 360

Query: 361 RRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           RR RISER+KKLQELFPDMDKQTSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 RRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 415

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL
Match: M5X189_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006134mg PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-67
Identity = 186/424 (43.87%), Postives = 239/424 (56.37%), Query Frame = 1


Query: 6   SPNFKFSNDEVKK-YPDFMDCDSTNNHVSQQE------------NPNSAPHSLFASLVNG 65
           +PNFK S  E++K + +FMD +        Q+               SAP S    LV+ 
Sbjct: 9   NPNFKCSEAELRKNHTEFMDSNIFQQQQLHQQLQQPQQQSSGLMRYRSAPSSFLMDLVD- 68

Query: 66  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNE-ETFDSGS-------DERAV 125
                  +NGG G ED R++R SSP VE  L+RF++S NE +  D+G+       +ERAV
Sbjct: 69  -------SNGGVGCEDSRYLRPSSPEVETVLARFISSCNEPDHHDNGANSLQHQFEERAV 128

Query: 126 KQEMGESVRQHNEFCNQSSSMVNSAG-GAQIGNLFRVMNS--------SDYGARNSANLF 185
           KQE G+SV + N + N S  M  +    A   N F  +NS        S  G  N +NL 
Sbjct: 129 KQEAGDSVSKQNGYSNSSHMMYQAQQVHALDNNSFAAINSTGLENSMQSKIGVGNRSNLV 188

Query: 186 RQSSSPAGFFSNLAPQNG-NAARDIQKFGSCSRKDVDVA-YPYSRIGSQMNIT-GQSFAS 245
           RQSSSPAGFF +L   NG N  +D   F + +  + + +    SR+ +Q+N + G S   
Sbjct: 189 RQSSSPAGFFPDLTVDNGFNVMKDGASFRAGNGINGEASPSSTSRLNNQLNFSSGPSSYP 248

Query: 246 THMPPIAEEENKRM--------------------RAVRSSWDSSTIRDLKRGRDNNGRTF 305
             MP IAE EN  M                         SWD S+  DLKRGR+N+G  F
Sbjct: 249 RRMPRIAEMENGNMGDGSQQDQGLGNASNSHCISNFPNDSWDISSFNDLKRGRNNDGNKF 308

Query: 306 PTSILLETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPR 365
             S   ETQN D G+   GL HHLSLP  F    +EK L+FEE +  +IRAKRG ATHPR
Sbjct: 309 SNSTAFETQNNDFGHRNHGLTHHLSLPKHFEMPAMEKLLQFEESIPCKIRAKRGFATHPR 368

Query: 366 SIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCT 377
           SIAERMRR RISERMKKLQ+LFP+MDKQ +TA+ML+LA+E+IK LQ+QVKTL D KAKC+
Sbjct: 369 SIAERMRRTRISERMKKLQDLFPNMDKQINTAEMLDLAVEFIKDLQKQVKTLGDIKAKCS 424

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL
Match: B9HNL6_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s06910g PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-65
Identity = 183/426 (42.96%), Postives = 244/426 (57.28%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQE--------NPNSAPHSLFASLVNG 60
           M+LL S +FK+S+ E++K  +FMD +  + H  QQ+           SAP S+  SLVNG
Sbjct: 1   MNLLYSSSFKYSDGELRKSQEFMDLNPYHYHQQQQQIQQNSGLMRYRSAPSSILESLVNG 60

Query: 61  TEGFDSNNNGGGGRE--DYRFIRSSSPGVEAFLSRFMASYN------EETFDSGSDERAV 120
           T G D     GGG E  DYR++RSSSP ++  L+RFM+S N       +      +  A+
Sbjct: 61  TSGHD-----GGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDSSSQNLQEFGERPAI 120

Query: 121 KQEMGES------VRQHNEFCNQSSSMVNSAGGAQIGNLFRVMNS---------SDYGAR 180
           KQE G+S      +  HN   + S S+ NS   A     F VM+S         +     
Sbjct: 121 KQEGGDSEMVYQSLPGHNLVTDNSVSVGNSMDSA-----FNVMSSMALENSMQATKMSTA 180

Query: 181 NSANLFRQSSSPAGFFSNLAPQNGNAA-RDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQ 240
           N +NL RQ+SSPAG FS+L   NG    R+   F + +  + + A P +++   +N    
Sbjct: 181 NGSNLARQNSSPAGLFSDLGVDNGFVVMREGGSFRAGNGTNGE-ASPTNKLRRHVNF--- 240

Query: 241 SFASTHMPPIAE----------------EENKRMRAVRSSWDSSTIRDLKRGRDNNGRTF 300
           S     +P IAE                E     R    SWD +++  LKR RDN+G  F
Sbjct: 241 SSGQRMLPQIAEIGEECIGGRSPEGDVSEARYMSRFTSDSWDGASLSGLKRQRDNDGNMF 300

Query: 301 PTSILLETQNADSGNDIRGLAHHLSLPITFNKDP-VEKFLRFE-EPVRHQIRAKRGCATH 360
                L+ Q+ +SGN + GL HHLSLP T ++   +EKFL F+   V  +IRAKRG ATH
Sbjct: 301 SGLNTLDNQDGNSGNRVTGLTHHLSLPKTLSETATIEKFLDFQGNSVPCKIRAKRGFATH 360

Query: 361 PRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAK 377
           PRSIAER+RR RISERM+KLQELFP+MDKQT+TADML+LA+E+IK LQ+QVKTLTDTKAK
Sbjct: 361 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQVKTLTDTKAK 412

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL
Match: V4VHZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031622mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63
Identity = 180/430 (41.86%), Postives = 240/430 (55.81%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDC----DSTNNHVSQQE--NPNSAPHSLFASLVNGTE 60
           MSLL +PNFK+   +++K  +FMD     D  NN +S        SAP S   SLVN   
Sbjct: 1   MSLLYTPNFKYPEGDLRKNQEFMDSSAHYDQQNNQLSDSSLTRYRSAPSSFLESLVN--- 60

Query: 61  GFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDE------RAVKQEM 120
               +N+GGG  EDYR+ R SSP ++ FL+++M   N  + DSGS        +A+KQE 
Sbjct: 61  ----SNSGGGNCEDYRYFRPSSPEIDNFLAKYMLPCN-GSGDSGSHASQEFGVKAMKQEE 120

Query: 121 GESVRQHNEFCNQSSSM------VNSAGGAQIGNLFRVMNSSDYGAR------------- 180
            E + + NE+ N SS M      V+S G     N+   M++S YG               
Sbjct: 121 PEPITEQNEYSNGSSQMVYQNLPVHSVGNDISVNVGNAMDNS-YGVASSMALENSMQERM 180

Query: 181 ---NSANLFRQSSSPAGFFSNLAPQNGNAA-RDIQKFGSCSRKDVDVAYPYSRIGSQMNI 240
              N +NL RQ+SSPAG FSNL   NG A  R+   F +C+  +++ +   SR+ +++N+
Sbjct: 181 ATGNGSNLTRQNSSPAGLFSNLGVDNGFAGMRNGGCFRACNGTNLEASTSASRLINRVNL 240

Query: 241 TGQSFASTHMPPIAEEENKRM---------------------RAVRSSWDSSTIRDLKRG 300
           +  S +S  MP I E  N+ M                           WD ++   +KR 
Sbjct: 241 SPGS-SSRFMPQITETGNQSMGNSSPEKNLVGNNGASRQYVPNFPSDPWDDASFSGVKRA 300

Query: 301 RDNNGRTFPTSILLETQNADSGNDIRGLAHHLSLPIT-FNKDPVEKFLRFEEPVRHQIRA 360
           RD+      +    ETQN +SGN    L HHLSLP T      VEKFL F+  V  +IRA
Sbjct: 301 RDSTCNMSFSLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCKIRA 360

Query: 361 KRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKT 374
           KRGCATHPRSIAER+RR RISERM+KLQ+LFP+MDKQT+TA+ML+LA+E+IK LQ+QVK 
Sbjct: 361 KRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 420

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL
Match: A0A067LGX8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16731 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.7e-63
Identity = 174/419 (41.53%), Postives = 240/419 (57.28%), Query Frame = 1


Query: 1   MSLL-CSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPN------SAPHSLFASLVNGT 60
           MSLL  SP+FK+ + E+++  + MD +  +    QQ++ +      SAP S   SLV+  
Sbjct: 1   MSLLYSSPSFKYQDGELRRNQELMDLNHHHYRQEQQQHSSGLTRYRSAPSSFLDSLVSVN 60

Query: 61  EGFDSNNNGGGG--REDYRFIRSSSPGVEAFLSRFMASYN------EETFDSGSDERAVK 120
            G     +GG G   EDYR+ RSSSP ++  L+RFM++ N              +   +K
Sbjct: 61  AG-----HGGAGVEGEDYRYFRSSSPEMDTMLARFMSTCNGSSNCNSHNLQEFGERPIMK 120

Query: 121 QEMGESVRQHNEFC--NQSSSMVN--SAGGAQIGNLFRVMNS---------SDYGARNSA 180
           QEM +S +   +    N  ++ VN  +     + N F VMNS         S     N +
Sbjct: 121 QEMEDSSQMIYQSLPVNNLANNVNPVNVNNNSMDNSFGVMNSMAPENSSQASKRNNGNGS 180

Query: 181 NLFRQSSSPAGFFSNLAPQNG-NAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFA 240
           NL RQSSSPAGFFSNL   +G    +D+  F   +  + + +   SR+ + +N     F+
Sbjct: 181 NLVRQSSSPAGFFSNLGVDSGFTVTKDVGSFQVSNGLNREASPSTSRLSNHVN-----FS 240

Query: 241 STHM----PPIAEE------------ENKRMRAVRSSWDSSTIRDLKRGRDNNGRTFPTS 300
           S H+    P I +E            + + M     SWD  +  D KR R+N G  F   
Sbjct: 241 SGHLLPQIPEIGDENPGASSPECNTGKRQYMNFANDSWDDCSSNDFKRLRNNEGNMFSGL 300

Query: 301 ILLETQNADSGNDIRGLAHHLSLPITFNK-DPVEKFLRFEEPVRHQIRAKRGCATHPRSI 360
            +LE +N +SGN + GL HHLSLP T  +   +EKFL+F+  V  ++RAKRGCATHPRSI
Sbjct: 301 SILENENGNSGNRLTGLTHHLSLPKTAAEMATIEKFLQFQGSVPCKVRAKRGCATHPRSI 360

Query: 361 AERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTC 374
           AER+RR RISERM+KLQ+LFP+MDKQT+TADML+LA+EYIK LQ+QVKTLTDT+AKCTC
Sbjct: 361 AERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLTDTRAKCTC 409

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 132/374 (35.29%), Postives = 200/374 (53.48%), Query Frame = 1


Query: 28  TNNHVSQQENPN--------SAPHSLFASLVNGTE-GFDSNNNGGGGREDYRFIRSSSPG 87
           +NNH+    NP         SAP S+ A+ V+  + GFDS+      R   RF+ S+   
Sbjct: 3   SNNHL-YDPNPTGSGLLRFRSAPSSVLAAFVDDDKIGFDSD------RLLSRFVTSNGVN 62

Query: 88  VEAFLSRF-----MASYNEETFDSGSDERAVKQEMGESVRQHNEFCNQSSSMVNSAGGAQ 147
            +    +F     ++  N     + +     + E    +     +  QS  ++NS G  Q
Sbjct: 63  GDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQ 122

Query: 148 IGNLFRVMNSSDYGARNSANLFRQSSSPAGFFSNLAPQNG-NAARDIQKFGSCSRKDVDV 207
              +     ++ +     +NL RQSSSPAG F+NL+ QNG  + R++  +     +D + 
Sbjct: 123 FLGI-----NNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNY----EEDEES 182

Query: 208 AYPYSRIGSQMNITGQSFASTHM----PPIAEEENKRMRAVRSSWDSST-----IRDLKR 267
               + +    +++ +  +S  M    P IA E N       S W+  +     +  LKR
Sbjct: 183 PSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPETNFPY----SHWNDPSSFIDNLSSLKR 242

Query: 268 GRDNNGRTFPTSILLETQNADSGNDIRGLAHHLSLPITFNKDP----VEKFLRFEEPVRH 327
             +++G+ F     L  QN +SGN ++ L+HHLSLP + +       V+K+L+ ++ V  
Sbjct: 243 EAEDDGKLF-----LGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQDSVPC 302

Query: 328 QIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQR 374
           +IRAKRGCATHPRSIAER+RR RISERM+KLQEL P+MDKQT+T+DML+LA++YIK LQR
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 351

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-29
Identity = 66/116 (56.90%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 259 ETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERM 318
           +T++ DS +    LAHH+SLP + +   +E+ L    P +  IRAKRGCATHPRSIAER+
Sbjct: 266 KTKDEDSASRRPPLAHHMSLPKSLSD--IEQLLSDSIPCK--IRAKRGCATHPRSIAERV 325

Query: 319 RRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           RR +ISERM+KLQ+L P+MD QT+TADML+LA++YIK LQ QVK L +++A+C CS
Sbjct: 326 RRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-28
Identity = 108/346 (31.21%), Postives = 165/346 (47.69%), Query Frame = 1


Query: 40  SAPHSLFASLVNGTEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGS 99
           SAP S   S+V+   G        GG  + R      P  + F+  F     + +     
Sbjct: 28  SAPGSFLNSVVDEVIG--------GGSSNARDFTGYQPSSDNFIGNFFTGAADSSSLRSD 87

Query: 100 DERAVKQEMGESVRQ----HNEFCNQSSSMVNSAGGAQIGNLFRVMNSSDYGARNSA--- 159
                     +  +Q    +N   N+   +  S GG     + +   S+D G  NS+   
Sbjct: 88  STTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGG--FNEISQQHKSNDIGGGNSSGSY 147

Query: 160 NLFRQSSSPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQS--- 219
           +L RQ SSPA FF+ LA    N + +        +   +    +SR+ SQ++ T      
Sbjct: 148 SLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHSRLKSQLSFTNHDSLA 207

Query: 220 -FASTHMPPIAEEENKRMRAVRSSWDSSTIRDLKRGRDNNGRTFPTSILLETQNADSGND 279
                +  P+ +       A  +S+ ++T      G  + G T  T     +++ DS   
Sbjct: 208 RINEVNETPVHDGSGHSFSA--ASFGAATTDSWDDGSGSIGFTV-TRPSKRSKDMDS--- 267

Query: 280 IRGLAHHLSLPITFNKDPVEKFLRF-EEPVRHQIRAKRGCATHPRSIAERMRRIRISERM 339
             GL    SLP   + + ++ F++  E+ V  +IRAKRGCATHPRSIAER RR RIS ++
Sbjct: 268 --GLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKL 327

Query: 340 KKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTC 374
           KKLQ+L P+MDKQTS +DML+LA+++IKGLQ Q++ L   +  CTC
Sbjct: 328 KKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTC 355

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10
Match: AT2G43140.2 (AT2G43140.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 5.3e-26
Identity = 93/240 (38.75%), Postives = 126/240 (52.50%), Query Frame = 1


Query: 145 DYGARNSANLFRQSSSPAGFFSNLAPQNGNA---ARDIQKFGSCSRKDVDVAYPYSRIGS 204
           D  A +S++LFR  SSPAGF+    P + N     R    +G    +        SR+ S
Sbjct: 73  DSNASSSSSLFRHRSSPAGFYDQHLPTDPNGFSLGRPNGGYGGGGEQGP------SRLKS 132

Query: 205 QMNIT-GQSFASTH--MPPIAEEENKRMRAVRSSWDSSTIRDLKRGRDNNGRTFPTSILL 264
           ++  + G S    H  +P I+E E     A R+   SS++      R NN     + I  
Sbjct: 133 ELRFSSGSSSHQEHNSLPRISEVE--AAAAARNGVASSSM-SFGNNRTNNWDNSSSHISF 192

Query: 265 ---ETQNADSGNDIRGLAHHLSLP-ITFNKDPVEKFLRF-EEPVRHQIRAKRGCATHPRS 324
              +       +D   L    S+P  T     +E  +   E+ V  + RAKRG ATHPRS
Sbjct: 193 TIDQPGKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRS 252

Query: 325 IAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTC 374
           IAER RR RIS ++KKLQEL P+MDKQTS ADML+LA+E+IKGLQ QV++L     +CTC
Sbjct: 253 IAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTC 303

[Close]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10
Match: AT4G09180.1 (AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-25
Identity = 54/80 (67.50%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 294 EEPVRHQIRAKRGCATHPRSIAERMRRIRISERMKKLQELFPDMDKQTSTADMLELAIEY 353
           E+ V  ++RAKRGCATHPRSIAER+RR RIS+R++KLQEL P+MDKQT+TADMLE A+EY
Sbjct: 177 EDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEY 236

Query: 354 IKGLQRQVKTLTDTKAKCTC 374
           +K LQRQ++ LT+ + +CTC
Sbjct: 237 VKVLQRQIQELTEEQKRCTC 256

[Close]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr
Match: gi|659122677|ref|XP_008461268.1| (PREDICTED: transcription factor bHLH130-like isoform X2 [Cucumis melo])

HSP 1 Score: 557.8 bits (1436), Expect = 1.5e-155
Identity = 299/416 (71.88%), Postives = 332/416 (79.81%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP+SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPNSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGSREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVN-----SAGGAQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           RQ N FCNQSSSMVN     S G AQIGN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 RQQNGFCNQSSSMVNTSSVDSGGRAQIGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDV+ AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLTAENGNTTREVDKFGTCNRKDVNAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD+KRGRDNNG  F TSI+L
Sbjct: 241 EEENKSIGIVSSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVL 300

Query: 301 ETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERM 360
           +TQNADSGN+IRGLAHHLSLPI+FNKDPVEK+LRF+EPV HQIRAKRGCATHPRSIAERM
Sbjct: 301 KTQNADSGNNIRGLAHHLSLPISFNKDPVEKYLRFQEPVPHQIRAKRGCATHPRSIAERM 360

Query: 361 RRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           RR RISER+KKLQELFPDMDKQTSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 RRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 415

[Close]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr
Match: gi|778728696|ref|XP_011659461.1| (PREDICTED: transcription factor bHLH130 isoform X2 [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 2.1e-154
Identity = 300/416 (72.12%), Postives = 331/416 (79.57%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPTSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGTREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVNS----AGG-AQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           +Q N FCNQ SSMVN+    AGG A +GN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 QQQNGFCNQPSSMVNTRSVDAGGRAPVGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDVD AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLIAENGNTTREVDKFGTCNRKDVDAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD KRGRDNNGR F TSI+L
Sbjct: 241 EEENKSIGIVGSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDTKRGRDNNGRAFATSIVL 300

Query: 301 ETQNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAERM 360
           ETQNADSGN+IRGLAHHLSLPI+FNKDPVEKFLRF+EPV HQIRAKRGCATHPRSIAERM
Sbjct: 301 ETQNADSGNNIRGLAHHLSLPISFNKDPVEKFLRFQEPVPHQIRAKRGCATHPRSIAERM 360

Query: 361 RRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           RR RISER+KKLQELFPDMDKQTSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 RRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 415

[Close]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr
Match: gi|659122673|ref|XP_008461266.1| (PREDICTED: transcription factor bHLH130-like isoform X1 [Cucumis melo])

HSP 1 Score: 553.1 bits (1424), Expect = 3.7e-154
Identity = 299/417 (71.70%), Postives = 332/417 (79.62%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP+SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPNSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGSREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVN-----SAGGAQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           RQ N FCNQSSSMVN     S G AQIGN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 RQQNGFCNQSSSMVNTSSVDSGGRAQIGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDV+ AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLTAENGNTTREVDKFGTCNRKDVNAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD+KRGRDNNG  F TSI+L
Sbjct: 241 EEENKSIGIVSSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVL 300

Query: 301 ET-QNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAER 360
           +T QNADSGN+IRGLAHHLSLPI+FNKDPVEK+LRF+EPV HQIRAKRGCATHPRSIAER
Sbjct: 301 KTQQNADSGNNIRGLAHHLSLPISFNKDPVEKYLRFQEPVPHQIRAKRGCATHPRSIAER 360

Query: 361 MRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           MRR RISER+KKLQELFPDMDKQTSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 MRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 416

[Close]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr
Match: gi|778728688|ref|XP_011659459.1| (PREDICTED: transcription factor bHLH130 isoform X1 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 5.3e-153
Identity = 300/417 (71.94%), Postives = 331/417 (79.38%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPTSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGTREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVNS----AGG-AQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           +Q N FCNQ SSMVN+    AGG A +GN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 QQQNGFCNQPSSMVNTRSVDAGGRAPVGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDVD AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLIAENGNTTREVDKFGTCNRKDVDAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD KRGRDNNGR F TSI+L
Sbjct: 241 EEENKSIGIVGSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDTKRGRDNNGRAFATSIVL 300

Query: 301 ET-QNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAER 360
           ET QNADSGN+IRGLAHHLSLPI+FNKDPVEKFLRF+EPV HQIRAKRGCATHPRSIAER
Sbjct: 301 ETQQNADSGNNIRGLAHHLSLPISFNKDPVEKFLRFQEPVPHQIRAKRGCATHPRSIAER 360

Query: 361 MRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           MRR RISER+KKLQELFPDMDKQTSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 MRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 416

[Close]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr
Match: gi|659122679|ref|XP_008461269.1| (PREDICTED: transcription factor bHLH130-like isoform X3 [Cucumis melo])

HSP 1 Score: 547.0 bits (1408), Expect = 2.6e-152
Identity = 298/417 (71.46%), Postives = 331/417 (79.38%), Query Frame = 1


Query: 1   MSLLCSPNFKFSNDEVKKYPDFMDCDSTNNHVSQQENPNS--------APHSLFASLVNG 60
           MSLL S NFKFSNDE+KKYPDFMDCDSTNNH SQQE+ NS        AP+SLFASLV+G
Sbjct: 1   MSLLYSTNFKFSNDEMKKYPDFMDCDSTNNHHSQQEHNNSGGLMRYCSAPNSLFASLVDG 60

Query: 61  TEGFDSNNNGGGGREDYRFIRSSSPGVEAFLSRFMASYNEETFDSGSDERAVKQEMGESV 120
           TEGF+S+NNGGG REDYRFIRSSSP VE  LSRFMAS N + FDSGS ER VK+E GE V
Sbjct: 61  TEGFNSSNNGGGSREDYRFIRSSSPEVEVILSRFMASCNGK-FDSGSGERTVKEETGEPV 120

Query: 121 RQHNEFCNQSSSMVN-----SAGGAQIGNLFRVMNSSDY--------GARNSANLFRQSS 180
           RQ N FCNQSSSMVN     S G AQIGN + VMNSSD+        GARN +NLFRQSS
Sbjct: 121 RQQNGFCNQSSSMVNTSSVDSGGRAQIGNSYGVMNSSDFDNSMQSQLGARNCSNLFRQSS 180

Query: 181 SPAGFFSNLAPQNGNAARDIQKFGSCSRKDVDVAYPYSRIGSQMNITGQSFASTHMPPIA 240
           SPAGFFS+L  +NGN  R++ KFG+C+RKDV+ AYP +RIGSQMN++G SF S HMPPIA
Sbjct: 181 SPAGFFSHLTAENGNTTREVDKFGTCNRKDVNAAYPSTRIGSQMNLSGHSFGSNHMPPIA 240

Query: 241 EEENKRMRAV---------------------RSSWDSSTIRDLKRGRDNNGRTFPTSILL 300
           EEENK +  V                      SSWD+S +RD+KRGRDNNG  F TSI+L
Sbjct: 241 EEENKSIGIVSSSRHRQKANSGDRLQTDDFLNSSWDNSAMRDIKRGRDNNGHAFSTSIVL 300

Query: 301 ET-QNADSGNDIRGLAHHLSLPITFNKDPVEKFLRFEEPVRHQIRAKRGCATHPRSIAER 360
           +T QNADSGN+IRGLAHHLSLPI+FNKDPVEK+LRF+EPV HQIRAKRGCATHPRSIAER
Sbjct: 301 KTQQNADSGNNIRGLAHHLSLPISFNKDPVEKYLRFQEPVPHQIRAKRGCATHPRSIAER 360

Query: 361 MRRIRISERMKKLQELFPDMDKQTSTADMLELAIEYIKGLQRQVKTLTDTKAKCTCS 375
           MRR RISER+KKLQELFPDMDK TSTADMLELA+EYIKGLQRQVKTLTDTKAKCTCS
Sbjct: 361 MRRTRISERIKKLQELFPDMDK-TSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCS 415

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g06890.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH130_ARATH	5.7e-38	35.29	Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1	[more]
BH122_ARATH	9.0e-28	56.90	Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1	[more]
BH128_ARATH	1.3e-26	31.21	Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1	[more]
BH081_ARATH	3.6e-24	67.50	Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1	[more]
BH080_ARATH	3.9e-23	64.20	Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1	[more]

BLAST of Cp4.1LG12g06890.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9U6_CUCSA	1.5e-154	72.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428890 PE=4 SV=1	[more]
M5X189_PRUPE	1.1e-67	43.87	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006134mg PE=4 SV=1	[more]
B9HNL6_POPTR	1.7e-65	42.96	Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s06910...	[more]
V4VHZ0_9ROSI	1.2e-63	41.86	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031622mg PE=4 SV=1	[more]
A0A067LGX8_JATCU	2.7e-63	41.53	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16731 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g06890.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42280.1	3.2e-39	35.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51140.1	5.1e-29	56.90	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05805.1	7.4e-28	31.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G43140.2	5.3e-26	38.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G09180.1	2.0e-25	67.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Cp4.1LG12g06890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122677\|ref\|XP_008461268.1\|	1.5e-155	71.88	PREDICTED: transcription factor bHLH130-like isoform X2 [Cucumis melo]	[more]
gi\|778728696\|ref\|XP_011659461.1\|	2.1e-154	72.12	PREDICTED: transcription factor bHLH130 isoform X2 [Cucumis sativus]	[more]
gi\|659122673\|ref\|XP_008461266.1\|	3.7e-154	71.70	PREDICTED: transcription factor bHLH130-like isoform X1 [Cucumis melo]	[more]
gi\|778728688\|ref\|XP_011659459.1\|	5.3e-153	71.94	PREDICTED: transcription factor bHLH130 isoform X1 [Cucumis sativus]	[more]
gi\|659122679\|ref\|XP_008461269.1\|	2.6e-152	71.46	PREDICTED: transcription factor bHLH130-like isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g06890	Cp4.1LG12g06890	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06890.1	Cp4.1LG12g06890.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06890.1:five_prime_utr:001	Cp4.1LG12g06890.1:five_prime_utr:001	five_prime_UTR
Cp4.1LG12g06890.1:five_prime_utr:002	Cp4.1LG12g06890.1:five_prime_utr:002	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06890.1:cds:001	Cp4.1LG12g06890.1:cds:001	CDS
Cp4.1LG12g06890.1:cds:002	Cp4.1LG12g06890.1:cds:002	CDS
Cp4.1LG12g06890.1:cds:003	Cp4.1LG12g06890.1:cds:003	CDS
Cp4.1LG12g06890.1:cds:004	Cp4.1LG12g06890.1:cds:004	CDS
Cp4.1LG12g06890.1:cds:005	Cp4.1LG12g06890.1:cds:005	CDS
Cp4.1LG12g06890.1:cds:006	Cp4.1LG12g06890.1:cds:006	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06890.1:three_prime_utr:001	Cp4.1LG12g06890.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 312..368 score: 4.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 313..358 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 313..363 score: 1.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 307..357 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 310..369 score: 3.79
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 66..374 score: 2.6
None	No IPR available	PANTHER	PTHR16223:SF36	SUBFAMILY NOT NAMED	coord: 66..374 score: 2.6