Cp4.1LG12g06650.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCGACAATGAAGTCCAAGAAAAAAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCGTTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGTAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTGTTCAACTACGGCGTCGGGATTCACTTGATGCAATCAGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGGTCAGTTTCTGAATTAAAAAATCGCAAAGAAAAGTTCGAATACATTTTAGGTTTTTGTTTCTTGAAATTGAAGTGTGGCAGTGCGAAGATATGGAAGCCATGGAGGAGAGATTGAAGGAATTGGGAGTGAAATACATGAGGAGAACGTTGGACGAGGAGAATGGCGAATCGATCGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGATCTGCAACTGCGAGAATCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAAAAATAG ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCGACAATGAAGTCCAAGAAAAAAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCGTTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGTAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTGTTCAACTACGGCGTCGGGATTCACTTGATGCAATCAGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGTGCGAAGATATGGAAGCCATGGAGGAGAGATTGAAGGAATTGGGAGTGAAATACATGAGGAGAACGTTGGACGAGGAGAATGGCGAATCGATCGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGATCTGCAACTGCGAGAATCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAAAAATAG ATGGAAAAAGAGATCGCAGATCGGAAGGCCACCGTCGACAATGAAGTCCAAGAAAAAAACGACGGAGAATCCGAAGAAATTACCGAGAGAGAGAGTACAAGAAAGGAGGAAGAGCATCCACTTCCGTTGATGGCGCTCAATCACGTCTCCAGAGTGTGCAGTAGCGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTTGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGCGCTTGGTTGTTCAACTACGGCGTCGGGATTCACTTGATGCAATCAGAGGACGAAGATAATGGAGTTCGTCAAGGCGATAAGGACCATCTGGATCCGTTGGACAACCACATCTCGTTTCAGTGCGAAGATATGGAAGCCATGGAGGAGAGATTGAAGGAATTGGGAGTGAAATACATGAGGAGAACGTTGGACGAGGAGAATGGCGAATCGATCGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGATCTGCAACTGCGAGAATCTGAAGGTGGTTCCGGCGGGTTCATCCGGCAGGATCAGGCTTCCGGCCGGTCGCCACAACCCTCCATTGGAATCGAATGGACAAAAATAG MEKEIADRKATVDNEVQEKNDGESEEITERESTRKEEEHPLPLMALNHVSRVCSSVKDSVDFYTKVLGFVLIERPQSFDFEGAWLFNYGVGIHLMQSEDEDNGVRQGDKDHLDPLDNHISFQCEDMEAMEERLKELGVKYMRRTLDEENGESIEQLFFNDPDGFMIEICNCENLKVVPAGSSGRIRLPAGRHNPPLESNGQK
BLAST of Cp4.1LG12g06650.1 vs. TrEMBL
Match: A0A0A0K9N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420800 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 9.7e-84 Identity = 163/207 (78.74%), Postives = 182/207 (87.92%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TrEMBL
Match: A0A0J8C9F3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119780 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 3.7e-67 Identity = 128/169 (75.74%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TrEMBL
Match: F6HHX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0158g00130 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65 Identity = 120/177 (67.80%), Postives = 152/177 (85.88%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TrEMBL
Match: A0A166GRK9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001920 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.3e-64 Identity = 122/173 (70.52%), Postives = 145/173 (83.82%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TrEMBL
Match: A0A151TLQ2_CAJCA (Lactoylglutathione lyase OS=Cajanus cajan GN=KK1_021582 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.5e-63 Identity = 115/180 (63.89%), Postives = 150/180 (83.33%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TAIR10
Match: AT2G28420.1 (AT2G28420.1 Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 235.0 bits (598), Expect = 4.2e-62 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TAIR10
Match: AT1G80160.1 (AT1G80160.1 Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 171.8 bits (434), Expect = 4.4e-43 Identity = 80/152 (52.63%), Postives = 114/152 (75.00%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. TAIR10
Match: AT1G15380.1 (AT1G15380.1 Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 165.2 bits (417), Expect = 4.1e-41 Identity = 81/159 (50.94%), Postives = 116/159 (72.96%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. NCBI nr
Match: gi|449436705|ref|XP_004136133.1| (PREDICTED: uncharacterized protein LOC101214301 [Cucumis sativus]) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83 Identity = 163/207 (78.74%), Postives = 182/207 (87.92%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. NCBI nr
Match: gi|700189854|gb|KGN45087.1| (hypothetical protein Csa_7G420800 [Cucumis sativus]) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83 Identity = 163/207 (78.74%), Postives = 182/207 (87.92%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. NCBI nr
Match: gi|659122849|ref|XP_008461357.1| (PREDICTED: lactoylglutathione lyase [Cucumis melo]) HSP 1 Score: 315.1 bits (806), Expect = 9.0e-83 Identity = 162/205 (79.02%), Postives = 181/205 (88.29%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. NCBI nr
Match: gi|720076382|ref|XP_010279599.1| (PREDICTED: uncharacterized protein LOC104613472 [Nelumbo nucifera]) HSP 1 Score: 264.2 bits (674), Expect = 1.8e-67 Identity = 120/169 (71.01%), Postives = 146/169 (86.39%), Query Frame = 1
BLAST of Cp4.1LG12g06650.1 vs. NCBI nr
Match: gi|731336152|ref|XP_010679102.1| (PREDICTED: uncharacterized protein LOC104894542 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 262.7 bits (670), Expect = 5.3e-67 Identity = 128/169 (75.74%), Postives = 147/169 (86.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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