Cp4.1LG12g04120.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCAGTAACAGAGAAAAGTCACTGTTTCACGTCTTGTCATTTGAGAAAGAGAGACACAGAAACGATGAGCAATTTAGACGTACCTCAATTGGCTTAGGGTTTTCAGGATCCTTCATCTCTCTCTGTCCCAATGCCTTCTTAAACCCTAATCACTCCCTCTTTCTCTCATCACAACAACAATGGTGGGTTCATTAATACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCACCAATTAATCACTTCTAAACCCTATACTCTGTTTCTTCTTCTTGCAGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGGTCAATTCTCAACCCATTTTCTTCAATACCCATTTCCCTCTTCTTTCTTTCTTAATTCCTTTTTCGTTGTTCTTCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAAGTATGTTCTTGATTGAGTTTGCAGAAACAGAGTAATTTTATTGTTTATCTTAATTGGGTTTGCAAGAAACAGAGTGAGTTTATTCTATATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTATTGTACATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTATTCTTTATCTTAATTGGGTTTGCAGAAACAGAGTGATTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTGATTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTGGTTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTGCAGAAACAGAGTGATTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTGTTGTTTTTGGTTGGTTGATTTAGTCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGGTTTAATTTCAAAATCCCCTTTCGATTTTCAATCTTCTGTTATGAACGTTGGTTTCGTTTCACAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGAATTTTTTATTATTATTATTATAAGGAGGGGATTTTGGGGACATGGATGGCATTTTGTGTTTCTCGTGGGGGTATTTTTGTAAAGGAGGCTCCTTCTGGCTTCTGAATTAAATTTTATAATTGTTATTTTAA TGTGCAGTAACAGAGAAAAGTCACTGTTTCACGTCTTGTCATTTGAGAAAGAGAGACACAGAAACGATGAGCAATTTAGACGTACCTCAATTGGCTTAGGGTTTTCAGGATCCTTCATCTCTCTCTGTCCCAATGCCTTCTTAAACCCTAATCACTCCCTCTTTCTCTCATCACAACAACAATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGAATTTTTTATTATTATTATTATAAGGAGGGGATTTTGGGGACATGGATGGCATTTTGTGTTTCTCGTGGGGGTATTTTTGTAAAGGAGGCTCCTTCTGGCTTCTGAATTAAATTTTATAATTGTTATTTTAA ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGA MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQRAPLY
BLAST of Cp4.1LG12g04120.1 vs. TrEMBL
Match: A0A0A0KCM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109690 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 1.7e-119 Identity = 219/252 (86.90%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TrEMBL
Match: A0A061DW44_THECC (PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_005554 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.1e-88 Identity = 174/245 (71.02%), Postives = 193/245 (78.78%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TrEMBL
Match: W9QGX0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020871 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85 Identity = 167/246 (67.89%), Postives = 194/246 (78.86%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TrEMBL
Match: V7B5E6_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_008G142900g PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.8e-85 Identity = 166/245 (67.76%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TrEMBL
Match: M5XKS3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023785mg PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85 Identity = 166/246 (67.48%), Postives = 192/246 (78.05%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein) HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68 Identity = 137/242 (56.61%), Postives = 165/242 (68.18%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53 Identity = 113/259 (43.63%), Postives = 153/259 (59.07%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein) HSP 1 Score: 185.3 bits (469), Expect = 4.6e-47 Identity = 109/247 (44.13%), Postives = 141/247 (57.09%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31 Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein) HSP 1 Score: 131.3 bits (329), Expect = 7.9e-31 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. NCBI nr
Match: gi|778712271|ref|XP_011656872.1| (PREDICTED: uncharacterized protein LOC101214475 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 2.5e-119 Identity = 219/252 (86.90%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. NCBI nr
Match: gi|659116568|ref|XP_008458138.1| (PREDICTED: uncharacterized protein LOC103497663 [Cucumis melo]) HSP 1 Score: 435.6 bits (1119), Expect = 5.5e-119 Identity = 219/250 (87.60%), Postives = 230/250 (92.00%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. NCBI nr
Match: gi|1009142952|ref|XP_015889001.1| (PREDICTED: uncharacterized protein LOC107423869 [Ziziphus jujuba]) HSP 1 Score: 344.7 bits (883), Expect = 1.3e-91 Identity = 176/247 (71.26%), Postives = 201/247 (81.38%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. NCBI nr
Match: gi|590723201|ref|XP_007052119.1| (PLATZ transcription factor family protein [Theobroma cacao]) HSP 1 Score: 333.6 bits (854), Expect = 3.0e-88 Identity = 174/245 (71.02%), Postives = 193/245 (78.78%), Query Frame = 1
BLAST of Cp4.1LG12g04120.1 vs. NCBI nr
Match: gi|703070839|ref|XP_010088883.1| (hypothetical protein L484_020871 [Morus notabilis]) HSP 1 Score: 323.9 bits (829), Expect = 2.3e-85 Identity = 167/246 (67.89%), Postives = 194/246 (78.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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