Cp4.1LG12g01210.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g01210.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	AWPM-19-like membrane family protein
Location	Cp4.1LG12 : 732304 .. 733910 (-)
Sequence length	651

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATGTGGGAATGTATTAAAAGCTTTTGCCTTATCTGCTTTCGGTTTGTGATAATATCATCATCATCTTTGCAGCTGTTGTTTACTTCTGGTTTTTGGAGACAGGAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTGCTTTTCAATGTTTGGAGTCTTGCATCAAGTTATGTAGTTCTTGGTGTCTTTTCAACCATTTTCTTTTGATTTTTTGATCATTTTCCGTCCTTGAGAATGTACTTGACAGTCTAACGTCATCGCTGGCAAACTCATCGTTGGTAGATGTTTGTCCTTTTTGGACTCGTTTTCGAGTTTAACTTCAAAGTTTTTAAAACGAAAAATGACTCTTTTAGAAAGAGATTTTCACATGCTTTCCCTCAAGGTCCTTAGGTCTTTAAAACGAGGCTATGAAGAGTTTGTCACACGCTTTTCCTGTCTTTAAAATGCTTCTAGGAAGAGATTTTCACACGCGTTTCCTCTAGGTCTTTAAAATGCATCTAGGAAGAGATTTTTACACGCTTTTCCTCGAGGTCTTCAAAACATCTTCCAACACTTTCCCTCAAGGTTTTTAGAACGCATCCGATTAGGGAGAGATTTTTCTTCAAGGTCTTTAAAACATATCCTCTAAGGAGGAAGATATTTTCCCAGACGACGTCTGTTAGGGAGAGATTTTAGGACGCGTCAAGGTCTTTAAAACATGTCTTCAAAAGAGGAAGATATTTTCACGGGAACATGTCTTCTAAGGAGGAAGATGCTTGAGAGAGATTTTGGAATGCTTCGTTACTCCATTACTTCAGGGAGAGATTTTAGAATGCTTCATTACTTCATTACGTGAGATCGATGTTTGTTCTTGTGGGAGAAAATGCAAAATCTCTCTCCTGAACACAAATTGTCAACTTTTACAAGCATAATTATGCTAATCATGAGCTATGTTTAGATTGTTCGGCCTCATTTTTTTTAACCCAAAAAAGATATTGACGTTTGTTTTTGGACTGCACAAGGTATGGGAGGCAACGGAGCAACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCCGTAACTGTTCTAGCTTTTGGGTAACTTTCTATAACTTCCACAACCATTTCTCTTCTATTTAGAGACGTAATTCTAAGATTCCTTTTCATTTCCCTTTCCGCAGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACAATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAG

mRNA sequence

CGATGTGGGAATGTATTAAAAGCTTTTGCCTTATCTGCTTTCGGTTTGTGATAATATCATCATCATCTTTGCAGCTGTTGTTTACTTCTGGTTTTTGGAGACAGGAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCAACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCCGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACAATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAG

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCAACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGTGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCCGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACAATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAG

Protein sequence

MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV

Homology

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL
Match: A0A0A0LI45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.0e-93
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL
Match: V4S0A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL
Match: Q39872_SOYBN (PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-68
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG-SAVPGEP--PKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDYG G G     G+P     TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKPATAGTRV 181

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL
Match: A0A0B2RXU3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-68
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG-SAVPGEP--PKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDYG G G     G+P     TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKPATAGTRV 181

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL
Match: A0A068TSW8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-67
Identity = 128/176 (72.73%), Postives = 152/176 (86.36%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA+T+GR++AAPLLFLNLIMYFI+LGFASWC+N YING T HPS GGNGATPFFLTFA+L
Sbjct: 1   MARTVGRSLAAPLLFLNLIMYFIVLGFASWCLNHYINGQTNHPSFGGNGATPFFLTFAIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            +V+G+ASKLAG  H+RAWRSDSLA AG++SL+ WAVT+LAFGLACK+I++GG RGWRL+
Sbjct: 61  ASVLGIASKLAGGNHLRAWRSDSLAAAGASSLVAWAVTILAFGLACKEINVGGRRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           V+E FII L  TQLLY+LL+HAG+FS RYGPGY D DYG+G     PG  PKGTAG
Sbjct: 121 VLEGFIIALGATQLLYVLLIHAGMFSSRYGPGYRDPDYGLG----APGAEPKGTAG 172

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TAIR10
Match: AT1G04560.1 (AT1G04560.1 AWPM-19-like family protein)

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-66
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA T+GRN+AAPLLFLNL+MY I+LGFASWC+N+YING T HPS GGNGATPFFLTF++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+IGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMG---GGSAVP---GEPPKGT 180
           ++EAFIIILT TQLLYL+L+HAG  S +YGPGY D DY  G   G   VP   GE   G 
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQAHGHGHVPHTVGEHKAGV 180

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TAIR10
Match: AT1G29520.1 (AT1G29520.1 AWPM-19-like family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYI-NGTTYHPSMG------------G 60
           MA    + +A+ LL LN  MY I+LG   W +NR I +G    P++             G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           +I + G R  +LR +EAF+IIL++TQL+Y+  +H
Sbjct: 121 EIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TAIR10
Match: AT5G46530.1 (AT5G46530.1 AWPM-19-like family protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  MY I+LG  +W +N+ IN     G  Y         H  MG
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  GNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
            N AT FF+ FA++  V G AS ++G+ H+++W + SL  A S + + W++T+LA G  C
Sbjct: 61  -NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGC 120

Query: 121 KQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           K+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 KEIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of Cp4.1LG12g01210.1 vs. TAIR10
Match: AT5G18970.1 (AT5G18970.1 AWPM-19-like family protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-20
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSM-------------GG 60
           MA    ++ A  LL LNL +YF++   ASW +N  I  T    S               G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGI 145
           +I+IG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

[Close]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr
Match: gi|659121514|ref|XP_008460698.1| (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr
Match: gi|449458914|ref|XP_004147191.1| (PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 8.6e-93
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr
Match: gi|568853146|ref|XP_006480228.1| (PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis])

HSP 1 Score: 266.9 bits (681), Expect = 2.5e-68
Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T LAFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITALAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           VVEAFIIILT TQ LYLLLLHA +FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 VVEAFIIILTFTQFLYLLLLHASMFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVGG 176

[Close]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr
Match: gi|567854545|ref|XP_006420392.1| (hypothetical protein CICLE_v10006007mg [Citrus clementina])

HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr
Match: gi|351734490|ref|NP_001238105.1| (maturation protein PM3 [Glycine max])

HSP 1 Score: 265.4 bits (677), Expect = 7.3e-68
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG-SAVPGEP--PKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDYG G G     G+P     TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKPATAGTRV 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g01210.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g01210.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI45_CUCSA	6.0e-93	94.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1	[more]
V4S0A7_9ROSI	2.3e-68	74.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1	[more]
Q39872_SOYBN	5.1e-68	73.74	PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1	[more]
A0A0B2RXU3_GLYSO	5.1e-68	73.74	Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1	[more]
A0A068TSW8_COFCA	1.5e-67	72.73	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g01210.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04560.1	9.5e-66	67.20	AWPM-19-like family protein	[more]
AT1G29520.1	1.5e-23	41.56	AWPM-19-like family protein	[more]
AT5G46530.1	1.7e-22	40.00	AWPM-19-like family protein	[more]
AT5G18970.1	3.5e-20	37.58	AWPM-19-like family protein	[more]

BLAST of Cp4.1LG12g01210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121514\|ref\|XP_008460698.1\|	2.9e-93	95.00	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
gi\|449458914\|ref\|XP_004147191.1\|	8.6e-93	94.44	PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus]	[more]
gi\|568853146\|ref\|XP_006480228.1\|	2.5e-68	75.00	PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis]	[more]
gi\|567854545\|ref\|XP_006420392.1\|	3.3e-68	74.43	hypothetical protein CICLE_v10006007mg [Citrus clementina]	[more]
gi\|351734490\|ref\|NP_001238105.1\|	7.3e-68	73.74	maturation protein PM3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g01210	Cp4.1LG12g01210	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g01210.1:five_prime_utr:001	Cp4.1LG12g01210.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g01210.1:cds:003	Cp4.1LG12g01210.1:cds:003	CDS
Cp4.1LG12g01210.1:cds:002	Cp4.1LG12g01210.1:cds:002	CDS
Cp4.1LG12g01210.1:cds:001	Cp4.1LG12g01210.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g01210.1	Cp4.1LG12g01210.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..143 score: 8.9
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..163 score: 7.5E
None	No IPR available	PANTHER	PTHR33294:SF5	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..163 score: 7.5E