Cp4.1LG12g00730.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g00730.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG12 : 395916 .. 398168 (-)
Sequence length1503
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCTTAACCTTTGTTCAGCCGCGCAGGGAAGTGTTGAACATTTATAGGGTTTCCGCTCTCTCCTGCTAATTCGACAAAATGGTAATCCCATTGCCTGCTGCTCATATTTTGGTTTATATGTTTTTATTCATGTTTGTAATTGGAGAATCCCTTGAGATTGTTTTTGTATATTCGTAAGTCGAAATTGATTACGTATTTCGTAATGACATCTCTTTGGCATTTAACGATGTATTTTGTTGAGCGATCAAGTTATTGTCGCTCTGTTAATTTGCCGGGAAATTTGAAGATTTCATGAACGTGGTTAATGATTTCGATACGTTTCGTGTTTTATCGGTGTTCTGAATAAGAATGCAGTATCGTTGTTTAGATGTTTGTATCCGGCATTATTGTGATATTCAGGATATGACATATGAAGCTTCGGCGAGTAGAATATTGTTATTTTTTAATGCATACGAACTTAGCTATTTGATATAGAACAGAGCATTCTTTTGCAAGTTCTGTTTGGAAATCCAACAAGATAAATTCTGTCTTTACATTTTAATTTTTTTTTTTGGTATAGTTTTACTCTGTAATAAAATTTAAACTAATTGCAATAATCTTTTCAATTCATTTAGTTATTGCTGGTTGTTAGGTAGGGAAGATGAATGAAATAATTATGCTGAATTTAGAATCTATCTGTAAGACAATCGCTTATTCTCCTTTCGAACCAGATGCAAAGCTTGATTGTTAACTTTGTATAGCTAAGCTAAATGCCATAACGAGCATAGTTTAGTTGACATAAAGTATGTATTTTTTTATCAAAAGGTCTGAGGTTTAAATTTTCCGCTCACGTTGTACTAAAAAACCATTGGCTAGTTAATCAGGGTGTCGGCCAAAGTTATGAATTTTTCATTTTGATGTCTTAATCTCTTAATTTGGTACATTAAAGTCTCGACTTAAAATTCTTTCAATCCTTTTTATCAATTCTTCTTTTTGTTCATGATGGTTGGATGCATGACTCTCCCATCTTTTTATGATGTTGTAGACAAAGAGAACCAAGAAGGCTGGGATCGTTGGCAAGTACGGTATGTGCTACTGTCGTCCTTGTTCCCAAGATATGATTGAATTGAAAAATTTAGGAAGTGGGAATATGTATAGGATTTAATGATTGAGGAGAATATTCTGATGTTTGCTCTGATAGATATATACTTCTTAACTGGTCTGGAATTTACGTCAGTGTTCATCAAACATTTTTCTTGTCTGCTAGCTGAGAACTTCCCCCATCCCCACACTCGCACCAAAAAAAATGCGAAACTATAAAAACAACTTTACCCATTGTCTTAAAAACACCTTTAGTTTTTCAAAAGTTTATATGTCACTAAACCCTTCATAAATACCCTTAGAGTAGATTTTAGATGGACATTGGGACCTGGAACAATGTAGCATGACCCTAGAATTGTGTAGCGATTCAAATTTTCTTTTTACACCATTTCAGGTTTCAATTTTCATTCTGAAATGCTGAAGGATTTTTACTGCTTTCTTGATTGCAGGTACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGCGGAAAGGTACAACAGCGTTAAAACCTTCTCTATGTGACTCTGAGTCCTTGCTGTTATGATAACTAAAAGCTTATATGAAGCTATGGATGTGAATTACTTAGCAATATTGGTGTATCCTTTCAGTATGCTGTGAAGAGAAAGGCTGTCGGAATATGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGCGCTTACACGTTGAAGTAAGCATATCTGAATTGCTCTCTCAATTTTTTTTCCCATCATATTCTTCAATGTTTTAATTATGTTTGTGAATGACAGTACTGCTAGTGCCGTCACTGTGAGGAGTACCATTAGAAGGTTGAGGGAGCAGACGGAGAGCTAAATCCAATCCTAAATTTATCATTCTATCTATCTATGAGATCGCACGGAGTAATGTTGTTGAGGTTCTCGAGTCGTCTTTAATTTCCATATATTTTTGCCGAATTCGTATCTTCTATCTTCAAACAGAAGTTGAGAAATGAATCAGTTTGTGGAATCTTGAGTTGATGATAATGAATGTGGGATATTTGTTTTAGAATCTGAATTTTAGTTTAATTAGTATTATAAGCTAGAAATTCCCCATATAATATTGAAACTGAAATGGTTGTTATTTATGTTGTGCTATGATCTCATT

mRNA sequence

TACCTTAACCTTTGTTCAGCCGCGCAGGGAAGTGTTGAACATTTATAGGGTTTCCGCTCTCTCCTGCTAATTCGACAAAATGGTAATCCCATTGCCTGCTGCTCATATTTTGGTTTATATGTTTTTATTCATGTTTGTAATTGGAGAATCCCTTGAGATTGTTTTTGTATATTCGTAAGTCGAAATTGATTACGTATTTCGTAATGACATCTCTTTGGCATTTAACGATGTATTTTGTTGAGCGATCAAGTTATTGTCGCTCTGTTAATTTGCCGGGAAATTTGAAGATTTCATGAACGTGGTTAATGATTTCGATACGTTTCGTGTTTTATCGGTGTTCTGAATAAGAATGCAGTATCGTTGTTTAGATGTTTGTATCCGGCATTATTGTGATATTCAGGATATGACATATGAAGCTTCGGCGAGTAGAATATTGTTATTTTTTAATGCATACGAACTTAGCTATTTGATATAGAACAGAGCATTCTTTTGCAAGTTCTGTTTGGAAATCCAACAAGATAAATTCTGTCTTTACATTTTAATTTTTTTTTTTGGTATAGTTTTACTCTGTAATAAAATTTAAACTAATTGCAATAATCTTTTCAATTCATTTAGTTATTGCTGGTTGTTAGGTAGGGAAGATGAATGAAATAATTATGCTGAATTTAGAATCTATCTGTAAGACAATCGCTTATTCTCCTTTCGAACCAGATGCAAAGCTTGATTGTTAACTTTGTATAGCTAAGCTAAATGCCATAACGAGCATAGTTTAGTTGACATAAAGTATGTATTTTTTTATCAAAAGGTCTGAGGTTTAAATTTTCCGCTCACGTTGTACTAAAAAACCATTGGCTAGTTAATCAGGGTGTCGGCCAAAGTTATGAATTTTTCATTTTGATGTCTTAATCTCTTAATTTGGTACATTAAAGTCTCGACTTAAAATTCTTTCAATCCTTTTTATCAATTCTTCTTTTTGTTCATGATGGTTGGATGCATGACTCTCCCATCTTTTTATGATGTTGTAGACAAAGAGAACCAAGAAGGCTGGGATCGTTGGCAAGTACGTATGCTGTGAAGAGAAAGGCTGTCGGAATATGGGGTTGCAAAGATTGTGGTAAAGTGAAAGCAGGAGGCGCTTACACGTTGAATACTGCTAGTGCCGTCACTGTGAGGAGTACCATTAGAAGGTTGAGGGAGCAGACGGAGAGCTAAATCCAATCCTAAATTTATCATTCTATCTATCTATGAGATCGCACGGAGTAATGTTGTTGAGGTTCTCGAGTCGTCTTTAATTTCCATATATTTTTGCCGAATTCGTATCTTCTATCTTCAAACAGAAGTTGAGAAATGAATCAGTTTGTGGAATCTTGAGTTGATGATAATGAATGTGGGATATTTGTTTTAGAATCTGAATTTTAGTTTAATTAGTATTATAAGCTAGAAATTCCCCATATAATATTGAAACTGAAATGGTTGTTATTTATGTTGTGCTATGATCTCATT

Coding sequence (CDS)

ATGGGGTTGCAAAGATTGTGGTAA

Protein sequence

MGLQRLW
Homology
The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g00730.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g00730.1 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g00730.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g00730.1 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG12g00730Cp4.1LG12g00730gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG12g00730.1:five_prime_utr:002Cp4.1LG12g00730.1:five_prime_utr:002five_prime_UTR
Cp4.1LG12g00730.1:five_prime_utr:001Cp4.1LG12g00730.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG12g00730.1:cds:001Cp4.1LG12g00730.1:cds:001CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG12g00730.1:three_prime_utr:002Cp4.1LG12g00730.1:three_prime_utr:002three_prime_UTR
Cp4.1LG12g00730.1:three_prime_utr:001Cp4.1LG12g00730.1:three_prime_utr:001three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG12g00730.1Cp4.1LG12g00730.1-proteinpolypeptide