Cp4.1LG11g09840.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09840.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Calmodulin
Location	Cp4.1LG11 : 8312447 .. 8314341 (-)
Sequence length	389

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAGCTGCTTCTTCTTCTTCATTGCATCATGTCGGAAGAGCAAATTTTAGAGTTTCAAGAAGCTTTTTGTCTGCTAGACAAAGATGGTGATGGTATGTATGAGTTATGAATATCGGAATCAAATTCTCTTCCATCACCGCTCGTGGTAGCTGACCGTTGCCACGATCGACCTTTTATTCTTGAATTTTTGAATTATCGATCATCGTTTGATAATCATTTTGTTGTTCGAGTTTTCATTTTTTTATAAAGTAAATGTATGATCTATTCTCATAATTTCTTTGGGTCGAACTTTTTTTTTCGTTTTATGAACTCAGCGATATGCATATGATGAAAACTCGAACCTCTAAGGCTAAAGATATACATCATAGCCCGTTGAGTTATGTTCAAGATGACTAGATATCTGATCGTAATTATGAACGTTTTTTGAAATATAGGTTGCATAACGATCAAAGAGCTTGCTACAGCGATTAGATCGTTACATCAAAACCCTACCGAGGAAGAATTGCAAATCATGATGAATGAAGTTGATGTTAACGGGAGTGGTTCCATTGAATTTGAGGAGTTCTTCAATCTGATGGCAAAGAAGATGAAGGTATTTATTAACCTTAATTTCAATTATACCCTTAAACTTTCTAAATATTTTATTTATAATTTTTAAATTATTTAAAAAAAATATTTTTTTTTGTTCAAATAAATGATAAAAAAAATTGTTATTTTAATAATAATGTTAAAATAATTACGTAATTACGTAAATAATATTGTTATTTTTAATAAAGGTAAAAAAAAAAAATAATAAATAATAATTCTAAGGGCATAAATGTAAACTTACTTCCAAGTACGGGTATTTTAATAATTTATTTATTTTTTCCACAAGGATTTTTCAAATAATCAATTATATACTTCTAATTTCCACAAATATTCAACGAGGCCAACTTGTTGGAATATGAGTTTTGACTTTTTATTTTATTTTATTTTATTTTATATTTTCGAGGATTATGTAATTTTTAATTTGTTATTTAAAGAAAGTAATTATTAATAGATAAATTGTTAAACAAGCCTGCTAATATTTTTTTAAATTATTATTAAATCTTCATTTTGTTGATAAAATAAGTCAATTACTTGTTAAAAAAAGCATGTTTATGCTTAAGAAATTGATAAAATAAATTAGTTTATTCAATAATTTAAAAGAAATATATTTCAATAATTTATAAAATAATTAAATATCTGTGACGTTTCGAGATAGTTTGAGATAGTTTTTTTTTTTTTTTTTTTTNTAAAATAATAGCGATAATTTTCCTTCCGAAAGAGACACAATGTGGTAACGTTCATCGAAGAAAGACTAATAAAGGGTATTTAAGGATTTATTGAAAGTTCGAGAATTAAATTTAAATATTTGAATATTTAGGAAAGTGAAGCCGAAGAAGAATTGAGAGAAGCTTTCAAAGTATTTGATATGGATCAAGATGGGTTCATATCGCCTAACGAGGTTTGACTTCTAATTACCCTAAAGAAAAAGAAAAGAAAAGGTTGGAAGCGTTTTTTGGTTGGTTTTTTAAAATTGATATTGTCTGATAGGTCGGTTGGTTTGAGCGTTTATGAATTCACCAGCCAACCGATTCCAGTTGATACGTGAACTTAAATCGACCAACTGAAGTCAATTCGATCGATCAGCTCGATTTTCAAGTTTTGTTACTTATTTCTACTTAAAAATTTATGAATCTCTCTCGATCATTTTCAATCCCTAAACCCTAACTCGAAAAACCCGAGAAAAAAGGGTTAAAATAGTTTAATTTTGTGTGTTTGGCAGCTGAAGAATGTGATGATCCACATGGTGGAGAAATTAACTGATGAAGAAGTGGAGCAAATGGTGAAAGAAGCTGATTTGGATGGAGAT

mRNA sequence

ACCAGCTGCTTCTTCTTCTTCATTGCATCATGTCGGAAGAGCAAATTTTAGAGTTTCAAGAAGCTTTTTGTCTGCTAGACAAAGATGGTGATGCGATTAGATCGTTACATCAAAACCCTACCGAGGAAGAATTGCAAATCATGATGAATGAAGTTGATGTTAACGGGAGTGGTTCCATTGAATTTGAGGAGTTCTTCAATCTGATGGCAAAGAAGATGAAGGAAAGTGAAGCCGAAGAAGAATTGAGAGAAGCTTTCAAAGTATTTGATATGGATCAAGATGGGTTCATATCGCCTAACGAGCTGAAGAATGTGATGATCCACATGGTGGAGAAATTAACTGATGAAGAAGTGGAGCAAATGGTGAAAGAAGCTGATTTGGATGGAGAT

Coding sequence (CDS)

ATGTCGGAAGAGCAAATTTTAGAGTTTCAAGAAGCTTTTTGTCTGCTAGACAAAGATGGTGATGCGATTAGATCGTTACATCAAAACCCTACCGAGGAAGAATTGCAAATCATGATGAATGAAGTTGATGTTAACGGGAGTGGTTCCATTGAATTTGAGGAGTTCTTCAATCTGATGGCAAAGAAGATGAAGGAAAGTGAAGCCGAAGAAGAATTGAGAGAAGCTTTCAAAGTATTTGATATGGATCAAGATGGGTTCATATCGCCTAACGAGCTGAAGAATGTGATGATCCACATGGTGGAGAAATTAACTGATGAAGAAGTGGAGCAAATGGTGAAAGAAGCTGATTTGGATGGAGAT

Protein sequence

MSEEQILEFQEAFCLLDKDGDAIRSLHQNPTEEELQIMMNEVDVNGSGSIEFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQMVKEADLDGD

Homology

[Close]

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot
Match: CML11_ARATH (Calmodulin-like protein 11 OS=Arabidopsis thaliana GN=CML11 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.2e-39
Identity = 81/130 (62.31%), Postives = 108/130 (83.08%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +++EQI+EF+EAFCL DKDGD           IRSL QNPTE+ELQ M+ E+D +G+G+I
Sbjct: 28  LTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTI 87

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMA +++E++A+EEL+EAFKVFD DQ+G+IS +EL++VMI++ EKLTDEEV+Q
Sbjct: 88  EFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQ 147

[Close]

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot
Match: CML8_ARATH (Calmodulin-like protein 8 OS=Arabidopsis thaliana GN=CML8 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.0e-38
Identity = 82/130 (63.08%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++++QI EF+EAFCL DKDGD           IRSL QNPTE+EL  ++ E+D + +G+I
Sbjct: 6   LTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTI 65

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKK++ES+AEEEL+EAFKVFD DQ+G+IS +EL +VMI++ EKLTDEEVEQ
Sbjct: 66  EFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQ 125

[Close]

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-37
Identity = 79/130 (60.77%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +++EQI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMA+KMK++++EEEL+EAF+VFD DQDGFIS  EL++VM ++ EKLTDEEV++
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-37
Identity = 80/130 (61.54%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +++EQI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMAKKMK++++EEEL+EAF+VFD DQ+GFIS  EL++VM ++ EKLTDEEVE+
Sbjct: 65  DFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot
Match: CALM4_ARATH (Calmodulin-4 OS=Arabidopsis thaliana GN=CAM4 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.8e-37
Identity = 80/130 (61.54%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +++EQI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMAKKMK++++EEEL+EAF+VFD DQ+GFIS  EL++VM ++ EKLTDEEVE+
Sbjct: 65  DFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL
Match: A0A0A0LFI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011480 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.0e-49
Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 1


Query: 1   MSEEQIL-EFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGS 60
           MSEEQI+ EFQEAFCLLDKDGD          AIRSLH NPTEEELQIMMNEVDVNG+G 
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVE 120
           IEF EFFNLMAKKMKE+EAE+ELREAFKVFDMD DG ISPNELKNVMIHMVEKLTDEE+E
Sbjct: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL
Match: A0A067JIE9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23490 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.9e-43
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++EEQI EFQEAFCLLDKDGD          AI+SL QNPTEEELQ M+NEVDV+G+G+I
Sbjct: 5   LTEEQINEFQEAFCLLDKDGDGRITFEELATAIKSLDQNPTEEELQTMINEVDVDGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMA+KMKE+EA+EEL+EAFKVFD DQDG+ISPNEL+ VMI++ EKLTDEE+EQ
Sbjct: 65  EFGEFLNLMARKMKENEADEELKEAFKVFDKDQDGYISPNELRRVMINLGEKLTDEELEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL
Match: A0A0D2N7X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G046000 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-41
Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +SEEQI+EF+EAFCL DKDGD           IRSL QNPTEEELQ M+ EVD +G+G+I
Sbjct: 5   LSEEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMITEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKKMKE++AEEEL+EAFKVFD DQ+G+IS NEL++VMI++ EKLTDEEVEQ
Sbjct: 65  EFAEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISANELRHVMINLGEKLTDEEVEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL
Match: A0A067L860_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02247 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.0e-41
Identity = 91/130 (70.00%), Postives = 110/130 (84.62%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++EEQI+EF+EAFCL DKDGD           IRSL QNPTEEELQ M++EVD +G+G+I
Sbjct: 5   LTEEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKKMKE++AEEEL+EAFKVFD DQ+G+IS NEL++VMI++ EKLTDEEVEQ
Sbjct: 65  EFAEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISANELRHVMINLGEKLTDEEVEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL
Match: V4T483_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003695mg PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.9e-41
Identity = 89/130 (68.46%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           + E+QI EFQEAFC+LD+DGD          AI+SL QNPTEEEL+ M++EVDVNG+G+I
Sbjct: 5   LPEDQIAEFQEAFCMLDRDGDGCITIEELAVAIKSLDQNPTEEELRNMISEVDVNGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMA+KMKE+EA+EEL+EAFKVFD DQDG+ISPNEL++VM+++ EK+TDEE+EQ
Sbjct: 65  EFGEFLNLMARKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNIGEKVTDEELEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10
Match: AT3G22930.1 (AT3G22930.1 calmodulin-like 11)

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-40
Identity = 81/130 (62.31%), Postives = 108/130 (83.08%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +++EQI+EF+EAFCL DKDGD           IRSL QNPTE+ELQ M+ E+D +G+G+I
Sbjct: 28  LTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTI 87

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMA +++E++A+EEL+EAFKVFD DQ+G+IS +EL++VMI++ EKLTDEEV+Q
Sbjct: 88  EFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQ 147

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10
Match: AT4G14640.1 (AT4G14640.1 calmodulin 8)

HSP 1 Score: 158.7 bits (400), Expect = 2.3e-39
Identity = 82/130 (63.08%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++++QI EF+EAFCL DKDGD           IRSL QNPTE+EL  ++ E+D + +G+I
Sbjct: 6   LTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTI 65

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKK++ES+AEEEL+EAFKVFD DQ+G+IS +EL +VMI++ EKLTDEEVEQ
Sbjct: 66  EFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQ 125

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-37
Identity = 78/130 (60.00%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++++QI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMA+KMK++++EEEL+EAF+VFD DQ+GFIS  EL++VM ++ EKLTDEEV++
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-37
Identity = 78/130 (60.00%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++++QI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMA+KMK++++EEEL+EAF+VFD DQ+GFIS  EL++VM ++ EKLTDEEV++
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 151.4 bits (381), Expect = 3.6e-37
Identity = 77/130 (59.23%), Postives = 105/130 (80.77%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++++QI EF+EAF L DKDGD           +RSL QNPTE ELQ M+NEVD +G+G+I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           +F EF NLMA+KMK++++EEEL+EAF+VFD DQ+GFIS  EL++VM ++ EKLTDEEV++
Sbjct: 65  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr
Match: gi|659070621|ref|XP_008455900.1| (PREDICTED: calmodulin-like protein 8 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-49
Identity = 110/131 (83.97%), Postives = 114/131 (87.02%), Query Frame = 1


Query: 1   MSEEQIL-EFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGS 60
           MSEEQI+ EFQEAFCLLDKDGD          AIRSLH NPTEEELQIMMNEVDVNG+G 
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVE 120
           IEF EFFNLMAKKMKE+EAEEELREAFKVFDMD DG ISPNELKNVMIHMVEKLTDEE+E
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

[Close]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr
Match: gi|778666535|ref|XP_011648759.1| (PREDICTED: calmodulin-like protein 8 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 8.6e-49
Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 1


Query: 1   MSEEQIL-EFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGS 60
           MSEEQI+ EFQEAFCLLDKDGD          AIRSLH NPTEEELQIMMNEVDVNG+G 
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVE 120
           IEF EFFNLMAKKMKE+EAE+ELREAFKVFDMD DG ISPNELKNVMIHMVEKLTDEE+E
Sbjct: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

[Close]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr
Match: gi|802758281|ref|XP_012089252.1| (PREDICTED: calmodulin-like protein 11 [Jatropha curcas])

HSP 1 Score: 181.8 bits (460), Expect = 7.1e-43
Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGD----------AIRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           ++EEQI EFQEAFCLLDKDGD          AI+SL QNPTEEELQ M+NEVDV+G+G+I
Sbjct: 5   LTEEQINEFQEAFCLLDKDGDGRITFEELATAIKSLDQNPTEEELQTMINEVDVDGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMA+KMKE+EA+EEL+EAFKVFD DQDG+ISPNEL+ VMI++ EKLTDEE+EQ
Sbjct: 65  EFGEFLNLMARKMKENEADEELKEAFKVFDKDQDGYISPNELRRVMINLGEKLTDEELEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr
Match: gi|823163961|ref|XP_012481927.1| (PREDICTED: calmodulin-like protein 8 [Gossypium raimondii])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41
Identity = 92/130 (70.77%), Postives = 109/130 (83.85%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +SEEQI+EF+EAFCL DKDGD           IRSL QNPTEEELQ M+ EVD +G+G+I
Sbjct: 5   LSEEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMITEVDADGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKKMKE++AEEEL+EAFKVFD DQ+G+IS NEL++VMI++ EKLTDEEVEQ
Sbjct: 65  EFAEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISANELRHVMINLGEKLTDEEVEQ 124

[Close]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr
Match: gi|1009119667|ref|XP_015876504.1| (PREDICTED: calmodulin-like protein 8 [Ziziphus jujuba])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41
Identity = 92/130 (70.77%), Postives = 111/130 (85.38%), Query Frame = 1


Query: 1   MSEEQILEFQEAFCLLDKDGDA----------IRSLHQNPTEEELQIMMNEVDVNGSGSI 60
           +S+EQI+EF+EAFCL DKDGD           IRSL QNPTEEELQ M+NEVDV+G+G+I
Sbjct: 5   LSKEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQGMINEVDVDGNGTI 64

Query: 61  EFEEFFNLMAKKMKESEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVEQ 120
           EF EF NLMAKKMKE++AEEELREAFKVFD DQ+G+IS +EL++VMI++ EKLTDEEVEQ
Sbjct: 65  EFAEFLNLMAKKMKETDAEEELREAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09840.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML11_ARATH	6.2e-39	62.31	Calmodulin-like protein 11 OS=Arabidopsis thaliana GN=CML11 PE=2 SV=1	[more]
CML8_ARATH	4.0e-38	63.08	Calmodulin-like protein 8 OS=Arabidopsis thaliana GN=CML8 PE=1 SV=1	[more]
CALM_WHEAT	5.8e-37	60.77	Calmodulin OS=Triticum aestivum PE=1 SV=3	[more]
CALM1_ARATH	5.8e-37	61.54	Calmodulin-1 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=1	[more]
CALM4_ARATH	5.8e-37	61.54	Calmodulin-4 OS=Arabidopsis thaliana GN=CAM4 PE=1 SV=1	[more]

BLAST of Cp4.1LG11g09840.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFI9_CUCSA	6.0e-49	83.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011480 PE=4 SV=1	[more]
A0A067JIE9_JATCU	4.9e-43	72.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23490 PE=4 SV=1	[more]
A0A0D2N7X0_GOSRA	3.5e-41	70.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G046000 PE=4 SV=1	[more]
A0A067L860_JATCU	6.0e-41	70.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02247 PE=4 SV=1	[more]
V4T483_9ROSI	7.9e-41	68.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003695mg PE=4 SV=1	[more]

BLAST of Cp4.1LG11g09840.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22930.1	3.5e-40	62.31	calmodulin-like 11	[more]
AT4G14640.1	2.3e-39	63.08	calmodulin 8	[more]
AT3G56800.1	1.6e-37	60.00	calmodulin 3	[more]
AT2G27030.3	1.6e-37	60.00	calmodulin 5	[more]
AT3G43810.1	3.6e-37	59.23	calmodulin 7	[more]

BLAST of Cp4.1LG11g09840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070621\|ref\|XP_008455900.1\|	6.6e-49	83.97	PREDICTED: calmodulin-like protein 8 [Cucumis melo]	[more]
gi\|778666535\|ref\|XP_011648759.1\|	8.6e-49	83.21	PREDICTED: calmodulin-like protein 8 [Cucumis sativus]	[more]
gi\|802758281\|ref\|XP_012089252.1\|	7.1e-43	72.31	PREDICTED: calmodulin-like protein 11 [Jatropha curcas]	[more]
gi\|823163961\|ref\|XP_012481927.1\|	5.1e-41	70.77	PREDICTED: calmodulin-like protein 8 [Gossypium raimondii]	[more]
gi\|1009119667\|ref\|XP_015876504.1\|	5.1e-41	70.77	PREDICTED: calmodulin-like protein 8 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g09840	Cp4.1LG11g09840	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g09840.1:five_prime_utr:001	Cp4.1LG11g09840.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g09840.1:cds:004	Cp4.1LG11g09840.1:cds:004	CDS
Cp4.1LG11g09840.1:cds:003	Cp4.1LG11g09840.1:cds:003	CDS
Cp4.1LG11g09840.1:cds:002	Cp4.1LG11g09840.1:cds:002	CDS
Cp4.1LG11g09840.1:cds:001	Cp4.1LG11g09840.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g09840.1	Cp4.1LG11g09840.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 69..120 score: 5.1
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 22..61 score: 1.
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 34..62 score: 3.3E-5coord: 71..99 score: 5.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 67..102 score: 16.41coord: 103..120 score: 8.655coord: 4..21 score: 5.392coord: 30..65 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 2..57 score: 3.5E-18coord: 58..120 score: 2.7
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 2..120 score: 4.39
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 43..55 score: -coord: 80..92 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..120 score: 2.8
None	No IPR available	PANTHER	PTHR23050:SF177	CALMODULIN-LIKE PROTEIN 9	coord: 1..120 score: 2.8