Cp4.1LG11g09750.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCGCATCTGCAACCGCTATTCATCGGAATCAGGTGAGTGATTCAAGTTCTTGCGGCGTTTGGTTATTAAATTCATGCTTAGTTTTCGAGAAATGATTATGGATGATGTTTAAACTTGAATCTGGCTGGGAGTTTCAGGATTGTATTGCTTTAAGCTTGGTTTTTTTTTTCTTTTTCCTCATACTGATGCTTCGTTTTTAACCAGGTTGATCTGTCCGACTTCATTAATTGGTCTGGCGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGGTGCTGTTTATTATTATTTTGACTCGAGCTGTTAGTCAGTTGCTCGTACTTCATTGTTGTTTTTGAATTTCTTAAATAATTCATTTTTATGAAGTTAAAGATGATGCTGAGTTAGACTCGCGTTCTTCCACAATATAATTTGCATCTATTATTCCTTTCTAATTGCAAGAGATGGGAAGTTGTGAATATGGAGGTCAGCAAGGTTGGCTAGGTAGATGGAAGTTGATGAATATAAATTTAGCTCTTTGGGTCAAGTTGGCGAATAATTCCCTTTGAAAATAGATGTTGTTCAATTCATTGATTTCTGTTTTTCATCTTATAAGCCATCTTTGTGATATTGAGTTACGAAATTTGTCGAATCTTTCTCTGTTTTAGTAGTACGCGTAGTTGGGTTCTTCACTCTGATTTTGGAGGCTAAAATCTCAAAGAAGATAAAGTTTTTCACCTACCTGATTTCCTTGGGTAGATTATACTTACACCATAGACTTCGTCTAAAAGCCTTCATCTATGGTTTTGGGCCATCAGTCGTGTGTGTTGTATATGAAAGCAATAAAAGATGCTGATCATTTGCTATAGAGATGTCGCTTTGTTGTGAAAATTAGAACGATTTTTGCACATGTTTGGAGTTAGTTTGACTACTCCCAAAGATTGTAGGGATGAGGTGGAGAAGGTGCTTGTTAACCCAAATTTCCATGATTAGGGTCTGAATCAATGGCAAAAAATGTCTTCACAAATTTATTGAATCCATGGCTCGAAAAGAAATAAAGTATTCTAAGGGTAGTCTTGAAAGAGTCTTGAAATATGGAACATCTTAATATCTCTATATTCCAGTGTTCTCATCTAAAGTGTTATGAAATTATATCTTATGTTTTTATTTTTATCTATTGGACCAACCTATTGTAATTTTGTTTCAGGTTTTGTTTTTAGATTGCTATTTGTTTGGGCCACTTTTCTTATACATTCATTTGATGTATTATAAATATAAACGTCAAAATATCATTTTGGTTCTTCAACTTTGGACTAAATTTGAATATTTTGAAAGAAGGACTAAAATAGAACAAGTTCCAAAGTGGAAGGACAAAAATGATACTATAACCTAAAATAATTTTTTTTAATGATAAAATAGGTTTCTCTTTTTCCCCTTAATTTATTCCTAACAGGGAAATATTATACCGAGGGTTTGAAGCAACTTTTTTTTTCCTAAATTAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATATATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGTGAGTACTCTATCTATTACACCATTTTTTAATTCTAGTTCATGGTTTCTTCTCTCCTGAGTATTTCAGTACTGCTTGCATGTATATCGTAGTTCATCTCATCTATTGGCATAACAATTTTGTAACGTGGCTTACAATCCAACGTGGTCACTGAGGGTATGATAGTTCCATTTTAAATTTTTACTATTTGATTATTGTTATTTTGGGTTATCCACTCAAAATAACAGTCCTCTAGTCTTGTAAATCCCTTGTTGTACTGCAGTTTCTTGCTGTGGTGAGGGAGTAATGGACTACGGGCAGAGGAATGGAAAAATTTTCAGGGTTGGATAGAAACACAACATTGAGTTTCGGAGTGCATAAATGTGCTTTATATCAAAAACTTTTGTAATTGTCTCTTTACTTAATCGCATTCAATCGAGAAGTTCTTTTTTTTTTTTCTTTTTTCTTTTTTCTAGTAATTCTTGGCTGTGGAAGGATATCTAATCCTAATCCTCCCTGCCCTTTATTTACTCTCGCACCGCTATGTATTTCTTCTATTCAAAGAATATATGCAACATCTCATTTTAAATGAAAAAAGTACTGTATCACTTCGTCAAGAACGTACATATTGTCTTTCACCTTTCTGTATTTTGTTCTGCTTAACTGTCAAATCACAGGGTTTTAATATTGAGGTTATTCTCCAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGGTAAACGAACTGTTTTCTTTAGTTAATATTTGGTGCAAGTGTTTTCTAAATATTATAATCTGATGATTGTTTGTTTCATGAACGTTGCAGCAATGTCAATGACTACCCTCCCAGTGACACGATTGTGCTCTCCCCAGATAATCTTACGGTAGATTTTCCCATACTTGTATCTGTATCTCATCACAAAATGGAAAACTCTTTAGGTGAGACTATACACAGAAACTGGGAGATCATTGTTTATTGTTATGCTTTGTAGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGGTAAGTCATTGCTGTCATCAGAGTTAGTTTTCTTCATTTAGATCGTATATTGAAAGTCCCTGTTGATTGTTCTGAACTATTCAATTTTTTATCAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAGCTGACGTTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGTAA ATGGCTGCCGCATCTGCAACCGCTATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAATTGGTCTGGCGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATATATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAATGTCAATGACTACCCTCCCAGTGACACGATTGTGCTCTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAGCTGACGTTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGTAA ATGGCTGCCGCATCTGCAACCGCTATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAATTGGTCTGGCGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATATATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAATGTCAATGACTACCCTCCCAGTGACACGATTGTGCTCTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAGCTGACGTTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGTAA MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTT
BLAST of Cp4.1LG11g09750.1 vs. Swiss-Prot
Match: PITH1_ARATH (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana GN=At3g04780 PE=1 SV=2) HSP 1 Score: 240.0 bits (611), Expect = 1.8e-62 Identity = 119/161 (73.91%), Postives = 137/161 (85.09%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. Swiss-Prot
Match: TXNL1_HUMAN (Thioredoxin-like protein 1 OS=Homo sapiens GN=TXNL1 PE=1 SV=3) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24 Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. Swiss-Prot
Match: TXNL1_RAT (Thioredoxin-like protein 1 OS=Rattus norvegicus GN=Txnl1 PE=1 SV=3) HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23 Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. Swiss-Prot
Match: TXNL1_MOUSE (Thioredoxin-like protein 1 OS=Mus musculus GN=Txnl1 PE=1 SV=3) HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=txl1 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.8e-21 Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TrEMBL
Match: A0A0A0LIE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011520 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.2e-81 Identity = 151/160 (94.38%), Postives = 156/160 (97.50%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TrEMBL
Match: W9S6X8_9ROSA (PITH domain-containing protein OS=Morus notabilis GN=L484_024592 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 5.9e-68 Identity = 129/161 (80.12%), Postives = 146/161 (90.68%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TrEMBL
Match: B9REQ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1427670 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-66 Identity = 125/161 (77.64%), Postives = 144/161 (89.44%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TrEMBL
Match: A0A059D3U4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02113 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 1.9e-66 Identity = 125/161 (77.64%), Postives = 146/161 (90.68%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TrEMBL
Match: A0A067JIE3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23485 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 9.5e-66 Identity = 123/161 (76.40%), Postives = 144/161 (89.44%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. TAIR10
Match: AT3G04780.1 (AT3G04780.1 Protein of unknown function (DUF1000)) HSP 1 Score: 240.0 bits (611), Expect = 1.0e-63 Identity = 119/161 (73.91%), Postives = 137/161 (85.09%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. NCBI nr
Match: gi|659070607|ref|XP_008455826.1| (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo]) HSP 1 Score: 319.7 bits (818), Expect = 2.9e-84 Identity = 156/161 (96.89%), Postives = 159/161 (98.76%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. NCBI nr
Match: gi|778673984|ref|XP_004139228.2| (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis sativus]) HSP 1 Score: 310.5 bits (794), Expect = 1.8e-81 Identity = 151/160 (94.38%), Postives = 156/160 (97.50%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. NCBI nr
Match: gi|703121345|ref|XP_010102305.1| (PITH domain-containing protein [Morus notabilis]) HSP 1 Score: 265.0 bits (676), Expect = 8.5e-68 Identity = 129/161 (80.12%), Postives = 146/161 (90.68%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. NCBI nr
Match: gi|255542318|ref|XP_002512222.1| (PREDICTED: PITH domain-containing protein At3g04780 [Ricinus communis]) HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66 Identity = 125/161 (77.64%), Postives = 144/161 (89.44%), Query Frame = 1
BLAST of Cp4.1LG11g09750.1 vs. NCBI nr
Match: gi|629120772|gb|KCW85262.1| (hypothetical protein EUGRSUZ_B02113 [Eucalyptus grandis]) HSP 1 Score: 260.0 bits (663), Expect = 2.7e-66 Identity = 125/161 (77.64%), Postives = 146/161 (90.68%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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